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Protein
Submitted name:

Predicted amidohodrolase (Dihydroorotase family)

Gene

CA_C3337

Organism
Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi6 – 61Zinc 1; via tele nitrogenCombined sources
Metal bindingi8 – 81Zinc 1; via tele nitrogenCombined sources
Metal bindingi119 – 1191Zinc 1Combined sources
Metal bindingi119 – 1191Zinc 2Combined sources
Metal bindingi148 – 1481Zinc 2; via pros nitrogenCombined sources
Metal bindingi177 – 1771Zinc 2; via tele nitrogenCombined sources
Metal bindingi225 – 2251Zinc 1Combined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BioCyciCACE272562:GJIH-3434-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted amidohodrolase (Dihydroorotase family)Imported
Gene namesi
Ordered Locus Names:CA_C3337Imported
OrganismiClostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)Imported
Taxonomic identifieri272562 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000000814 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272562.CA_C3337.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3CJPX-ray1.85A/B2-262[»]
ProteinModelPortaliQ97DY3.
SMRiQ97DY3. Positions 1-262.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ97DY3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini3 – 261259Amidohydro-relInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108S0W. Bacteria.
COG2159. LUCA.
HOGENOMiHOG000285752.
KOiK07045.
OMAiVIFGHMG.
OrthoDBiEOG6QP10H.

Family and domain databases

InterProiIPR006680. Amidohydro-rel.
IPR032466. Metal_Hydrolase.
[Graphical view]
PfamiPF04909. Amidohydro_2. 1 hit.
[Graphical view]
SUPFAMiSSF51556. SSF51556. 1 hit.

Sequencei

Sequence statusi: Complete.

Q97DY3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIIDGHTHVI LPVEKHIKIM DEAGVDKTIL FSTSIHPETA VNLRDVKKEM
60 70 80 90 100
KKLNDVVNGK TNSMIDVRRN SIKELTNVIQ AYPSRYVGFG NVPVGLSEND
110 120 130 140 150
TNSYIEENIV NNKLVGIGEL TPASGQIKSL KPIFKYSMDS GSLPIWIHAF
160 170 180 190 200
NPLVLQDIKE IAELCKAFPK VPVILGHMGG SNWMTAVELA KEIQNLYLDT
210 220 230 240 250
SAYFSTFVLK IVINELPLKC IFGTDMPFGD LQLSIEAIKK MSNDSYVANA
260
VLGDNISRLL NI
Length:262
Mass (Da):29,059
Last modified:October 1, 2001 - v1
Checksum:iEBF00C67A42FE3C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001437 Genomic DNA. Translation: AAK81269.1.
PIRiB97310.
RefSeqiNP_349929.1. NC_003030.1.
WP_010966609.1. NC_003030.1.

Genome annotation databases

EnsemblBacteriaiAAK81269; AAK81269; CA_C3337.
GeneIDi1119519.
KEGGicac:CA_C3337.
PATRICi32041107. VBICloAce74127_3517.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001437 Genomic DNA. Translation: AAK81269.1.
PIRiB97310.
RefSeqiNP_349929.1. NC_003030.1.
WP_010966609.1. NC_003030.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3CJPX-ray1.85A/B2-262[»]
ProteinModelPortaliQ97DY3.
SMRiQ97DY3. Positions 1-262.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272562.CA_C3337.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK81269; AAK81269; CA_C3337.
GeneIDi1119519.
KEGGicac:CA_C3337.
PATRICi32041107. VBICloAce74127_3517.

Phylogenomic databases

eggNOGiENOG4108S0W. Bacteria.
COG2159. LUCA.
HOGENOMiHOG000285752.
KOiK07045.
OMAiVIFGHMG.
OrthoDBiEOG6QP10H.

Enzyme and pathway databases

BioCyciCACE272562:GJIH-3434-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ97DY3.

Family and domain databases

InterProiIPR006680. Amidohydro-rel.
IPR032466. Metal_Hydrolase.
[Graphical view]
PfamiPF04909. Amidohydro_2. 1 hit.
[Graphical view]
SUPFAMiSSF51556. SSF51556. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787Imported.
  2. "Crystal structure of an uncharacterized amidohydrolase CAC3332 from Clostridium acetobutylicum."
    Malashkevich V.N., Toro R., Ramagopal U.A., Bonanno J.B., Meyer A., Sauder J.M., Burley S.K., Almo S.C.
    Submitted (MAR-2008) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.85 ANGSTROMS) OF 2-262 IN COMPLEX WITH ZINC.

Entry informationi

Entry nameiQ97DY3_CLOAB
AccessioniPrimary (citable) accession number: Q97DY3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: April 13, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.