Unreviewed, UniProtKB/TrEMBL Q97D05 (Q97D05_CLOAB)

Names and origin

Protein names

Submitted name:
    Polygalacturonase EMBL AAK81605.1

Gene names

Ordered Locus Names:

CA_C3684

Organism

Clostridium acetobutylicum [Complete proteome] [HAMAP]

Taxonomic identifier

1488 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	534 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

General annotation (Comments)

Sequence similarities

Contains 1 fibronectin type-III domain. RuleBase RU000718V1

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	polygalacturonase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q97D05-1 [UniParc]. Last modified October 1, 2001. Version 1. Checksum: 67DC1CDF631E3D42	FASTA	534	57,352
	10 20 30 40 50 60 MLGKYKLQAI LAATALLFNV LFVNVNGKIV RAADTSNVPQ NVIVPDLGYS DSSITLIWDK 70 80 90 100 110 120 PTDYSKVVSY DVYVNNSLAA NTKKLNYTVT NLKPNTAYSF KVRAKYSDST ESEDSSVITQ 130 140 150 160 170 180 STTPTSQIFD VTKYGAVGDG KTLNTDKIQA AINACTDGGT VVIPQGTFLS GAIYLKSNMS 190 200 210 220 230 240 LRIDGTLLGS DNVNDYAFTS KRFPYYTTSN YMGLINAYTT NYGSISNVKI YGNGTVSGGT 250 260 270 280 290 300 YTSGKLTKLG QAQTNLKGDK ARGDLITAKG VTGLYLGGVN IVNPSEHSIF ISYSKNVTVD 310 320 330 340 350 360 GISVKTYGIH NADGIDIANT SVANIFNSYF DNGDDCINLN AGYGADAVKE NIPDNNIRIF 370 380 390 400 410 420 NSNTGRGHGG VVFGSYTGAW IQNVSVEDCD FNGTNIGLRF KTSKEIGGGA RNITVRDVTM 430 440 450 460 470 480 ENIVNDAISF DSNYGLTDVD NPAPVPGYFH DVTLSNIMCK KAGGYGIWVN ALPSQYNANL 490 500 510 520 530 SLNNITLNYC KKGASINYLQ DSTFTGVKFV NSGNTPWASS NTTNVKYINC TPQP

References

[1]

"Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum." Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R., Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F., Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V., Smith D.R. J. Bacteriol. 183:4823-4838(2001) [PubMed: 11466286] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE001437 Genomic DNA. Translation: AAK81605.1.
PIR	B97352.
RefSeq	NP_350265.1.
3D structure databases
HSSP	HSSP built from PDB template 1BJ8 based on UniProtKB P40189.
ModBase	Search...
Protein family/group databases
CAZy	GH28. Glycoside Hydrolase Family 28.
Genome annotation databases
GeneID	1119866.
GenomeReviews	Gene locus CA_C3684 in contig AE001437_GR.
KEGG	cac:CAC3684.
NMPDR	fig|272562.1.peg.3794.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q97D05.
OMA	Q97D05. AWIFNNY.
Enzyme and pathway databases
BioCyc	CACE272562:CAC3684-MON.
Family and domain databases
InterPro	IPR008957. Fibronectin_typ-III-like_fold. IPR003961. FN_III. IPR000743. Glyco_hydro_28. IPR006626. PbH1. IPR012334. Pectin_lyas_fold. [Graphical view]
Gene3D	G3DSA:2.60.40.30. FN_III-like. 1 hit. G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
Pfam	PF00041. fn3. 1 hit. PF00295. Glyco_hydro_28. 1 hit. [Graphical view]
SMART	SM00060. FN3. 1 hit. SM00710. PbH1. 7 hits. [Graphical view]
PROSITE	PS50853. FN3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q97D05_CLOAB

Accession

Primary (citable) accession number: Q97D05

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2001
Last sequence update:	October 1, 2001
Last modified:	June 16, 2009
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)