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Protein
Submitted name:

RNase L inhibitor

Gene

TVG1582460

Organism
Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi108 – 115ATPPROSITE-ProRule annotation8
Nucleotide bindingi374 – 381ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

LigandATP-bindingPROSITE-ProRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
RNase L inhibitorImported
Gene namesi
ORF Names:TVG1582460Imported
OrganismiThermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)Imported
Taxonomic identifieri273116 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermoplasmataThermoplasmatalesThermoplasmataceaeThermoplasma
Proteomesi
  • UP000001017 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi273116.TVN1498.

Structurei

3D structure databases

ProteinModelPortaliQ977Z2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini44 – 734Fe-4S ferredoxin-typeInterPro annotationAdd BLAST30
Domaini76 – 313ABC transporterInterPro annotationAdd BLAST238
Domaini336 – 556ABC transporterInterPro annotationAdd BLAST221

Phylogenomic databases

eggNOGiarCOG00187. Archaea.
COG1245. LUCA.
KOiK06174.
OMAiAYKPQYI.
OrthoDBiPOG093Z00XY.

Family and domain databases

InterProiView protein in InterPro
IPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
IPR013283. RLI1.
IPR007209. RNaseL-inhib_metal-bd_dom.
PANTHERiPTHR19248. PTHR19248. 1 hit.
PfamiView protein in Pfam
PF00005. ABC_tran. 2 hits.
PF00037. Fer4. 1 hit.
PF04068. RLI. 1 hit.
PRINTSiPR01868. ABCEFAMILY.
SMARTiView protein in SMART
SM00382. AAA. 2 hits.
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiView protein in PROSITE
PS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 1 hit.
PS00211. ABC_TRANSPORTER_1. 2 hits.
PS50893. ABC_TRANSPORTER_2. 2 hits.

Sequencei

Sequence statusi: Complete.

Q977Z2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVFMHVAVLD KDRCHPKKCH HECQYYCPPV RNHVMAIDFP DPDGQPLISE
60 70 80 90 100
TLCIGCGICI RRCPFGAIRI VTLPDELNKN VFHRYGVNGF RIYSLPTVVP
110 120 130 140 150
GKVSAILGQN GLGKTTTLNI LSGITVPNLG NYDKPPSKDA VIDRFARTTM
160 170 180 190 200
GAYFKGLYEE NKRAVLKNQY VDYIPKVVSG TIGEILRKNN ENGNFDEVVS
210 220 230 240 250
LLNLENALSK DVKECSGGEL QKLAIGTTLE KEADIYLFDE MTSYLDIGER
260 270 280 290 300
LNVSNIVQDL SKKKTVIVVE HDLAILDWLA DSVNIVYGDP GVYGIFSEPL
310 320 330 340 350
STNRAINAYL SGFLREENVR IRSYPIEFEE KSSKRDKFEH ILITWTDIKK
360 370 380 390 400
KLGDFSLDVH AGQIHTGEIS GVLGRNALGK STFVMMLAGV MNPDEGSISQ
410 420 430 440 450
NVKVSYKPQY ISTDFKGTVS DLIASALKDR AEDTYVKNEI FHPLNIPDIM
460 470 480 490 500
ENPVDGLSGG EMQRLSIAIT LSREADVYLI DEPSAHLDSS YRMVVAKVIR
510 520 530 540 550
RVMENTKKTA LVVDHDIYLI DLISDSLIVF SGEPGSHGAS DGPMDMKEGM
560 570 580 590
NRFLKMVGVT FRRDQSSNRP RINKKGSSLD RLQKEENRYY YA
Length:592
Mass (Da):66,198
Last modified:October 1, 2001 - v1
Checksum:i8455E2DD914531BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000011 Genomic DNA. Translation: BAB60667.1.

Genome annotation databases

EnsemblBacteriaiBAB60667; BAB60667; BAB60667.
KEGGitvo:TVG1582460.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000011 Genomic DNA. Translation: BAB60667.1.

3D structure databases

ProteinModelPortaliQ977Z2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi273116.TVN1498.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB60667; BAB60667; BAB60667.
KEGGitvo:TVG1582460.

Phylogenomic databases

eggNOGiarCOG00187. Archaea.
COG1245. LUCA.
KOiK06174.
OMAiAYKPQYI.
OrthoDBiPOG093Z00XY.

Family and domain databases

InterProiView protein in InterPro
IPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
IPR013283. RLI1.
IPR007209. RNaseL-inhib_metal-bd_dom.
PANTHERiPTHR19248. PTHR19248. 1 hit.
PfamiView protein in Pfam
PF00005. ABC_tran. 2 hits.
PF00037. Fer4. 1 hit.
PF04068. RLI. 1 hit.
PRINTSiPR01868. ABCEFAMILY.
SMARTiView protein in SMART
SM00382. AAA. 2 hits.
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiView protein in PROSITE
PS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 1 hit.
PS00211. ABC_TRANSPORTER_1. 2 hits.
PS50893. ABC_TRANSPORTER_2. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiQ977Z2_THEVO
AccessioniPrimary (citable) accession number: Q977Z2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: April 12, 2017
This is version 99 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.