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Protein

RutC family protein STK_08110

Gene

STK_08110

Organism
Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BRENDAi3.5.99.10. 6166.

Names & Taxonomyi

Protein namesi
Recommended name:
RutC family protein STK_08110
Gene namesi
Ordered Locus Names:STK_08110
OrganismiSulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Taxonomic identifieri273063 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000001015 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001703461 – 125RutC family protein STK_08110Add BLAST125

Interactioni

Protein-protein interaction databases

STRINGi273063.ST0811.

Structurei

Secondary structure

1125
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi1 – 4Combined sources4
Beta strandi18 – 22Combined sources5
Beta strandi25 – 31Combined sources7
Turni36 – 38Combined sources3
Beta strandi39 – 41Combined sources3
Helixi46 – 63Combined sources18
Helixi68 – 70Combined sources3
Beta strandi71 – 79Combined sources9
Helixi81 – 83Combined sources3
Helixi84 – 94Combined sources11
Beta strandi101 – 106Combined sources6
Helixi111 – 113Combined sources3
Beta strandi115 – 123Combined sources9

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1X25X-ray2.00A/B1-125[»]
ProteinModelPortaliQ973T6.
SMRiQ973T6.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ973T6.

Family & Domainsi

Sequence similaritiesi

Belongs to the RutC family.Curated

Phylogenomic databases

eggNOGiarCOG01630. Archaea.
COG0251. LUCA.
HOGENOMiHOG000267215.
KOiK09022.
OMAiGSYFKEP.

Family and domain databases

Gene3Di3.30.1330.40. 1 hit.
InterProiIPR013813. Endoribo_LPSP/chorism_mut-like.
IPR006056. RidA.
IPR019897. RidA_CS.
IPR006175. YjgF/YER057c/UK114.
[Graphical view]
PANTHERiPTHR11803. PTHR11803. 1 hit.
PfamiPF01042. Ribonuc_L-PSP. 1 hit.
[Graphical view]
SUPFAMiSSF55298. SSF55298. 1 hit.
TIGRFAMsiTIGR00004. TIGR00004. 1 hit.
PROSITEiPS01094. UPF0076. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q973T6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METVFTEKAP KPVGPYSQAI KVGNTLYVSG QIPIDPRTNE IVKGDIKVQT
60 70 80 90 100
RQVLDNIKEI VKAAGFSLSD VAMAFVFLKD MNMFNDFNSV YAEYFKDKPP
110 120
ARVTVEVSRL PKDALIEIAV ICSKG
Length:125
Mass (Da):13,857
Last modified:December 1, 2001 - v1
Checksum:iF73059979D2B8957
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000023 Genomic DNA. Translation: BAB65824.1.
RefSeqiWP_010978807.1. NC_003106.2.

Genome annotation databases

EnsemblBacteriaiBAB65824; BAB65824; STK_08110.
GeneIDi1458774.
KEGGisto:STK_08110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000023 Genomic DNA. Translation: BAB65824.1.
RefSeqiWP_010978807.1. NC_003106.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1X25X-ray2.00A/B1-125[»]
ProteinModelPortaliQ973T6.
SMRiQ973T6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi273063.ST0811.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB65824; BAB65824; STK_08110.
GeneIDi1458774.
KEGGisto:STK_08110.

Phylogenomic databases

eggNOGiarCOG01630. Archaea.
COG0251. LUCA.
HOGENOMiHOG000267215.
KOiK09022.
OMAiGSYFKEP.

Enzyme and pathway databases

BRENDAi3.5.99.10. 6166.

Miscellaneous databases

EvolutionaryTraceiQ973T6.

Family and domain databases

Gene3Di3.30.1330.40. 1 hit.
InterProiIPR013813. Endoribo_LPSP/chorism_mut-like.
IPR006056. RidA.
IPR019897. RidA_CS.
IPR006175. YjgF/YER057c/UK114.
[Graphical view]
PANTHERiPTHR11803. PTHR11803. 1 hit.
PfamiPF01042. Ribonuc_L-PSP. 1 hit.
[Graphical view]
SUPFAMiSSF55298. SSF55298. 1 hit.
TIGRFAMsiTIGR00004. TIGR00004. 1 hit.
PROSITEiPS01094. UPF0076. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY811_SULTO
AccessioniPrimary (citable) accession number: Q973T6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: December 1, 2001
Last modified: November 2, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.