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Protein
Submitted name:

dTDP-4-dehydrorhamnose reductase

Gene

rfbD

Organism
Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei130NADPCombined sources1
Binding sitei134NADPCombined sources1
Binding sitei154NADP; via amide nitrogen and carbonyl oxygenCombined sources1
Binding sitei158NADPCombined sources1
Binding sitei257NADPCombined sources1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi7 – 12NADPCombined sources6
Nucleotide bindingi31 – 33NADPCombined sources3
Nucleotide bindingi42 – 43NADPCombined sources2
Nucleotide bindingi66 – 68NADPCombined sources3

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseImported
LigandNADPCombined sources, Nucleotide-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
dTDP-4-dehydrorhamnose reductaseImported (EC:1.1.1.133Imported)
Gene namesi
Name:rfbDImported
Synonyms:rmlDImported, ST1970Imported
Ordered Locus Names:STK_19700Imported
OrganismiSulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)Imported
Taxonomic identifieri273063 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000001015 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi273063.ST1970.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2GGSX-ray1.70A/B1-273[»]
ProteinModelPortaliQ96Z61.
SMRiQ96Z61.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ96Z61.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 260RmlD_sub_bindInterPro annotationAdd BLAST260

Phylogenomic databases

eggNOGiarCOG01367. Archaea.
COG1091. LUCA.
HOGENOMiHOG000227711.
KOiK00067.
OMAiFRHKGFP.
OrthoDBiPOG093Z06OH.

Family and domain databases

InterProiView protein in InterPro
IPR016040. NAD(P)-bd_dom.
IPR029903. RmlD-like-bd.
PfamiView protein in Pfam
PF04321. RmlD_sub_bind. 1 hit.
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

Q96Z61-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTLITGASG QLGIELSRLL SERHEVIKVY NSSEIQGGYK LDLTDFPRLE
60 70 80 90 100
DFIIKKRPDV IINAAAMTDV DKCEIEKEKA YKINAEAVRH IVRAGKVIDS
110 120 130 140 150
YIVHISTDYV FDGEKGNYKE EDIPNPINYY GLSKLLGETF ALQDDSLIIR
160 170 180 190 200
TSGIFRNKGF PIYVYKTLKE GKTVFAFKGY YSPISARKLA SAILELLELR
210 220 230 240 250
KTGIIHVAGE RISRFELALK IKEKFNLPGE VKEVDEVRGW IAKRPYDSSL
260 270
DSSRARKILS TDFYTLDLDG MVV
Length:273
Mass (Da):30,955
Last modified:December 1, 2001 - v1
Checksum:i916325DF33DD7614
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000023 Genomic DNA. Translation: BAB67065.1.
RefSeqiWP_010980041.1. NC_003106.2.

Genome annotation databases

EnsemblBacteriaiBAB67065; BAB67065; STK_19700.
GeneIDi1460030.
KEGGisto:STK_19700.
PATRICifig|273063.9.peg.2245.

Similar proteinsi

Entry informationi

Entry nameiQ96Z61_SULTO
AccessioniPrimary (citable) accession number: Q96Z61
Entry historyiIntegrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: September 27, 2017
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported