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Protein
Submitted name:

2-keto-3-deoxy-gluconate kinase

Gene

kdgK

Organism
Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei194 – 1941ADPCombined sources
Binding sitei283 – 2831ADPCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi224 – 2296ADPCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

KinaseImported, Transferase

Keywords - Ligandi

Nucleotide-bindingCombined sources

Enzyme and pathway databases

BioCyciSTOK273063:GJC7-2697-MONOMER.
BRENDAi2.7.1.45. 6166.

Names & Taxonomyi

Protein namesi
Submitted name:
2-keto-3-deoxy-gluconate kinaseImported (EC:2.7.1.45Imported)
Gene namesi
Name:kdgKImported
Ordered Locus Names:STK_24780Imported
OrganismiSulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)Imported
Taxonomic identifieri273063 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000001015 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi273063.ST2478.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1WYEX-ray2.80A/B/C/D/E/F1-311[»]
2DCNX-ray2.25A/B/C/D/E/F/G/H/I/J/K/L1-311[»]
ProteinModelPortaliQ96XN9.
SMRiQ96XN9. Positions 2-310.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ96XN9.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 298298PfkBInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiarCOG00014. Archaea.
COG0524. LUCA.
HOGENOMiHOG000235951.
KOiK18126.
OMAiGAWFKTA.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR011611. PfkB_dom.
IPR029056. Ribokinase-like.
[Graphical view]
PfamiPF00294. PfkB. 1 hit.
[Graphical view]
SUPFAMiSSF53613. SSF53613. 1 hit.

Sequencei

Sequence statusi: Complete.

Q96XN9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKLITLGEI LIEFNALSPG PLRHVSYFEK HVAGSEANYC VAFIKQGNEC
60 70 80 90 100
GIIAKVGDDE FGYNAIEWLR GQGVDVSHMK IDPSAPTGIF FIQRHYPVPL
110 120 130 140 150
KSESIYYRKG SAGSKLSPED VDEEYVKSAD LVHSSGITLA ISSTAKEAVY
160 170 180 190 200
KAFEIASNRS FDTNIRLKLW SAEEAKREIL KLLSKFHLKF LITDTDDSKI
210 220 230 240 250
ILGESDPDKA AKAFSDYAEI IVMKLGPKGA IVYYDGKKYY SSGYQVPVED
260 270 280 290 300
VTGAGDALGG TFLSLYYKGF EMEKALDYAI VASTLNVMIR GDQENLPTTK
310
DIETFLREMK K
Length:311
Mass (Da):34,480
Last modified:December 1, 2001 - v1
Checksum:i670DA66756FA3903
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000023 Genomic DNA. Translation: BAB67588.1.
RefSeqiWP_010980563.1. NC_003106.2.

Genome annotation databases

EnsemblBacteriaiBAB67588; BAB67588; STK_24780.
GeneIDi1460561.
KEGGisto:STK_24780.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000023 Genomic DNA. Translation: BAB67588.1.
RefSeqiWP_010980563.1. NC_003106.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1WYEX-ray2.80A/B/C/D/E/F1-311[»]
2DCNX-ray2.25A/B/C/D/E/F/G/H/I/J/K/L1-311[»]
ProteinModelPortaliQ96XN9.
SMRiQ96XN9. Positions 2-310.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi273063.ST2478.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB67588; BAB67588; STK_24780.
GeneIDi1460561.
KEGGisto:STK_24780.

Phylogenomic databases

eggNOGiarCOG00014. Archaea.
COG0524. LUCA.
HOGENOMiHOG000235951.
KOiK18126.
OMAiGAWFKTA.

Enzyme and pathway databases

BioCyciSTOK273063:GJC7-2697-MONOMER.
BRENDAi2.7.1.45. 6166.

Miscellaneous databases

EvolutionaryTraceiQ96XN9.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR011611. PfkB_dom.
IPR029056. Ribokinase-like.
[Graphical view]
PfamiPF00294. PfkB. 1 hit.
[Graphical view]
SUPFAMiSSF53613. SSF53613. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 16993 / JCM 10545 / NBRC 100140 / 7Imported.
  2. "Crystal structure of 2-keto-3-deoxygluconate kinase from Sulfolobus Tokodaii."
    Toyoda T, Suzuki K., Hossain M.T., Koike I., Sekiguchi T., Takenaka A.
    Submitted (FEB-2005) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS).
  3. "Crystal structure of 2-keto-3-deoxygluconate kinase from Sulfolobus tokodaii complexed with 2-keto-6-phosphogluconate."
    Okazaki S., Onda H., Suzuki A., Kuramitsu S., Masui R., Yamane T.
    Submitted (JAN-2006) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.25 ANGSTROMS) IN COMPLEX WITH ADP.

Entry informationi

Entry nameiQ96XN9_SULTO
AccessioniPrimary (citable) accession number: Q96XN9
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: March 16, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.