2-keto-3-deoxy-gluconate kinase - Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)

Preferred order of sections

Names and origin

Protein names

Submitted name:
2-keto-3-deoxy-gluconate kinase EMBL BAB67588.1
EC=2.7.1.45 EMBL BAB67588.1

Gene names

Name:	kdgK EMBL BAB67588.1
Ordered Locus Names:	STK_24780 EMBL BAB67588.1

Organism

Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) [Complete proteome] [HAMAP]

Taxonomic identifier

273063 [NCBI]

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Sulfolobus

Protein attributes

Sequence length	311 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Nucleotide-binding PDB 2DCN
Molecular function	Kinase EMBL BAB67588.1 Transferase
Technical term	3D-structure PDB 2DCN PDB 1WYE Complete proteome
Gene Ontology (GO)
Molecular function	2-dehydro-3-deoxygluconokinase activity Inferred from electronic annotation. Source: EC nucleotide binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Regions

Nucleotide binding

224 – 229

6

ADP PDB 2DCN

Sites

Binding site

194

1

ADP PDB 2DCN

Binding site

283

1

ADP PDB 2DCN

Sequences

Sequence

Length

Mass (Da)

Tools

Q96XN9 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 670DA66756FA3903
Show »

FASTA

311

34,480

        10         20         30         40         50         60 
MAKLITLGEI LIEFNALSPG PLRHVSYFEK HVAGSEANYC VAFIKQGNEC GIIAKVGDDE 

        70         80         90        100        110        120 
FGYNAIEWLR GQGVDVSHMK IDPSAPTGIF FIQRHYPVPL KSESIYYRKG SAGSKLSPED 

       130        140        150        160        170        180 
VDEEYVKSAD LVHSSGITLA ISSTAKEAVY KAFEIASNRS FDTNIRLKLW SAEEAKREIL 

       190        200        210        220        230        240 
KLLSKFHLKF LITDTDDSKI ILGESDPDKA AKAFSDYAEI IVMKLGPKGA IVYYDGKKYY 

       250        260        270        280        290        300 
SSGYQVPVED VTGAGDALGG TFLSLYYKGF EMEKALDYAI VASTLNVMIR GDQENLPTTK 

       310 
DIETFLREMK K

« Hide

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of an aerobic thermoacidophilic Crenarchaeon, Sulfolobus tokodaii strain7." Kawarabayasi Y., Hino Y., Horikawa H., Jin-no K., Takahashi M., Sekine M., Baba S., Ankai A., Kosugi H., Hosoyama A., Fukui S., Nagai Y., Nishijima K., Otsuka R., Nakazawa H., Takamiya M., Kato Y., Yoshizawa T. Kikuchi H. DNA Res. 8:123-140(2001) [PubMed: 11572479] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 16993 / JCM 10545 / NBRC 100140 / 7.
[2]	"Crystal structure of 2-keto-3-deoxygluconate kinase from Sulfolobus tokodaii complexed with 2-keto-6-phosphogluconate." Okazaki S., Onda H., Suzuki A., Kuramitsu S., Masui R., Yamane T. Submitted (JAN-2006) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.25 ANGSTROMS) IN COMPLEX WITH ADP.
[3]	"Crystal structure of 2-keto-3-deoxygluconate kinase from Sulfolobus Tokodaii." Toyoda T, Suzuki K., Hossain M.T., Koike I., Sekiguchi T., Takenaka A. Submitted (FEB-2005) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BA000023 Genomic DNA. Translation: BAB67588.1.

RefSeq

NP_378479.1. NC_003106.2.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1WYE	X-ray	2.80	A/B/C/D/E/F	1-311	[»]
2DCN	X-ray	2.25	A/B/C/D/E/F/G/H/I/J/K/L	1-311	[»]

ProteinModelPortal

Q96XN9.

SMR

Q96XN9. Positions 2-310.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

1460561.

GenomeReviews

Gene locus ST2478 in contig BA000023_GR.

KEGG

sto:ST2478.

NMPDR

fig|273063.1.peg.2647.

Organism-specific databases

CMR

Search...

Phylogenomic databases

HOGENOM

HBG697973.

OMA

EDELPLM.

PhylomeDB

Q96XN9.

ProtClustDB

CLSK883886.

Enzyme and pathway databases

BioCyc

STOK273063:ST2478-MONOMER.

Family and domain databases

InterPro

IPR011611. Carb/pur_kinase.
[Graphical view]

KO

K00874.

Pfam

PF00294. PfkB. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q96XN9_SULTO

Accession

Primary (citable) accession number: Q96XN9

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	December 14, 2011
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)