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Q96VH2 (YC01B_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative pelota-like protein YCL001W-B
Gene names
Ordered Locus Names:YCL001W-B
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length84 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 8484Putative pelota-like protein YCL001W-B
PRO_0000248412

Sequences

Sequence LengthMass (Da)Tools
Q96VH2 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: B226796C9A0B6F2B

FASTA849,572
        10         20         30         40         50         60 
MDDFLEHLSK DDNKAWYGAE ETERAAKLDA IETLLITDSV LKRNDVKKRE KYLDLIENSG 

        70         80 
NNNGKIFVLS TSKITVSNLT NQQI 

« Hide

References

« Hide 'large scale' references
[1]"The complete DNA sequence of yeast chromosome III."
Oliver S.G., van der Aart Q.J.M., Agostoni-Carbone M.L., Aigle M., Alberghina L., Alexandraki D., Antoine G., Anwar R., Ballesta J.P.G., Benit P., Berben G., Bergantino E., Biteau N., Bolle P.-A., Bolotin-Fukuhara M., Brown A., Brown A.J.P., Buhler J.-M. expand/collapse author list , Carcano C., Carignani G., Cederberg H., Chanet R., Contreras R., Crouzet M., Daignan-Fornier B., Defoor E., Delgado M.D., Demolder J., Doira C., Dubois E., Dujon B., Duesterhoeft A., Erdmann D., Esteban M., Fabre F., Fairhead C., Faye G., Feldmann H., Fiers W., Francingues-Gaillard M.-C., Franco L., Frontali L., Fukuhara H., Fuller L.J., Galland P., Gent M.E., Gigot D., Gilliquet V., Glansdorff N., Goffeau A., Grenson M., Grisanti P., Grivell L.A., de Haan M., Haasemann M., Hatat D., Hoenicka J., Hegemann J.H., Herbert C.J., Hilger F., Hohmann S., Hollenberg C.P., Huse K., Iborra F., Indge K.J., Isono K., Jacq C., Jacquet M., James C.M., Jauniaux J.-C., Jia Y., Jimenez A., Kelly A., Kleinhans U., Kreisl P., Lanfranchi G., Lewis C., van der Linden C.G., Lucchini G., Lutzenkirchen K., Maat M.J., Mallet L., Mannhaupt G., Martegani E., Mathieu A., Maurer C.T.C., McConnell D., McKee R.A., Messenguy F., Mewes H.-W., Molemans F., Montague M.A., Muzi Falconi M., Navas L., Newlon C.S., Noone D., Pallier C., Panzeri L., Pearson B.M., Perea J., Philippsen P., Pierard A., Planta R.J., Plevani P., Poetsch B., Pohl F.M., Purnelle B., Ramezani Rad M., Rasmussen S.W., Raynal A., Remacha M.A., Richterich P., Roberts A.B., Rodriguez F., Sanz E., Schaaff-Gerstenschlaeger I., Scherens B., Schweitzer B., Shu Y., Skala J., Slonimski P.P., Sor F., Soustelle C., Spiegelberg R., Stateva L.I., Steensma H.Y., Steiner S., Thierry A., Thireos G., Tzermia M., Urrestarazu L.A., Valle G., Vetter I., van Vliet-Reedijk J.C., Voet M., Volckaert G., Vreken P., Wang H., Warmington J.R., von Wettstein D., Wicksteed B.L., Wilson C., Wurst H., Xu G., Yoshikawa A., Zimmermann F.K., Sgouros J.G.
Nature 357:38-46(1992) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]"The reference genome sequence of Saccharomyces cerevisiae: Then and now."
Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R., Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S., Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.
G3 (Bethesda) 4:389-398(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Genomic exploration of the hemiascomycetous yeasts: 4. The genome of Saccharomyces cerevisiae revisited."
Blandin G., Durrens P., Tekaia F., Aigle M., Bolotin-Fukuhara M., Bon E., Casaregola S., de Montigny J., Gaillardin C., Lepingle A., Llorente B., Malpertuy A., Neuveglise C., Ozier-Kalogeropoulos O., Perrin A., Potier S., Souciet J.-L., Talla E. expand/collapse author list , Toffano-Nioche C., Wesolowski-Louvel M., Marck C., Dujon B.
FEBS Lett. 487:31-36(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X59720 Genomic DNA. Translation: CAC42969.1.
BK006937 Genomic DNA. Translation: DAA07480.1.
RefSeqNP_076878.1. NM_001184462.1.

3D structure databases

ProteinModelPortalQ96VH2.
SMRQ96VH2. Positions 1-71.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid30979. 1 interaction.
STRING4932.YCL001W-B.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYCL001W-B; YCL001W-B; YCL001W-B.
GeneID850356.
KEGGsce:YCL001W-B.

Organism-specific databases

CYGDYCL001w-b.
SGDS000007596. YCL001W-B.

Phylogenomic databases

eggNOGCOG1537.
OMAYEEIRCH.
OrthoDBEOG7PVX0C.

Enzyme and pathway databases

BioCycYEAST:G3O-29422-MONOMER.

Gene expression databases

GenevestigatorQ96VH2.

Family and domain databases

Gene3D3.30.1330.30. 1 hit.
InterProIPR005142. eRF1_3.
IPR029064. L30e-like.
IPR004405. Transl_rel_pelota.
[Graphical view]
PANTHERPTHR10853. PTHR10853. 1 hit.
PfamPF03465. eRF1_3. 1 hit.
[Graphical view]
SUPFAMSSF55315. SSF55315. 1 hit.
ProtoNetSearch...

Other

NextBio965827.

Entry information

Entry nameYC01B_YEAST
AccessionPrimary (citable) accession number: Q96VH2
Secondary accession number(s): D6VR11
Entry history
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: December 1, 2001
Last modified: June 11, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome III

Yeast (Saccharomyces cerevisiae) chromosome III: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

SIMILARITY comments

Index of protein domains and families