Q96TA1 (NIBL1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 99.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Niban-like protein 1 Alternative name(s): Meg-3 Melanoma invasion by ERK Short name=MINERVA Protein FAM129B | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 746 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May play a role in apoptosis suppression. May promote melanoma cell invasion in vitro. Ref.8 Ref.14 |
| Subcellular location | Cytoplasm › cytosol. Cell junction › adherens junction. Note: In exponentially growing cells, exclusively cytoplasmic. Cell membrane localization is observed when cells reach confluency and during telophase. In melanoma cells, targeting to the plasma membrane may be impaired by C-terminal phosphorylation. Ref.8 Ref.14 |
| Post-translational modification | Phosphorylated at Ser-641, Ser-646, Ser-692 and Ser-696 by the BRAF/MKK/ERK signaling cascade. In melanoma cells, the C-terminal phosphorylation may prevent targeting to the plasma membrane. Ref.8 As apoptosis proceeds, degraded via an proteasome-independent pathway, probably by caspases (Ref.14). |
| Sequence similarities | Belongs to the Niban family. Contains 1 PH domain. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cell junction Cytoplasm |
| Coding sequence diversity | Alternative splicing |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Direct protein sequencing Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | negative regulation of apoptotic process Inferred from mutant phenotype Ref.14. Source: UniProtKB |
| Cellular_component | adherens junction Inferred from direct assay Ref.14. Source: UniProtKB cytosolInferred from direct assay Ref.14. Source: UniProtKB |
| Molecular_function | phospholipid binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| Fam129b | Q8R1F1 | 1 | EBI-2514593,EBI-2552549 | From a different organism. |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q96TA1-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q96TA1-2) The sequence of this isoform differs from the canonical sequence as follows: 1-18: MGDVLSTHLDDARRQHIA → MGWMG |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 746 | 746 | Niban-like protein 1 | PRO_0000213121 | |||||
Regions | |||||||||
| Domain | 68 – 192 | 125 | PH | ||||||
Amino acid modifications | |||||||||
| Modified residue | 568 | 1 | Phosphoserine Ref.12 | ||||||
| Modified residue | 574 | 1 | Phosphoserine Ref.10 | ||||||
| Modified residue | 601 | 1 | Phosphoserine Ref.10 | ||||||
| Modified residue | 603 | 1 | Phosphoserine Ref.10 | ||||||
| Modified residue | 606 | 1 | Phosphothreonine Ref.10 | ||||||
| Modified residue | 609 | 1 | Phosphoserine Ref.10 | ||||||
| Modified residue | 624 | 1 | Phosphoserine Ref.11 | ||||||
| Modified residue | 638 | 1 | Phosphoserine Ref.10 Ref.12 | ||||||
| Modified residue | 641 | 1 | Phosphoserine Ref.8 Ref.10 Ref.11 Ref.12 | ||||||
| Modified residue | 646 | 1 | Phosphoserine Ref.8 Ref.9 Ref.10 Ref.11 Ref.12 | ||||||
| Modified residue | 665 | 1 | Phosphoserine Ref.8 Ref.9 Ref.11 Ref.12 Ref.15 | ||||||
| Modified residue | 681 | 1 | Phosphoserine Ref.8 Ref.9 Ref.11 Ref.12 Ref.15 | ||||||
| Modified residue | 692 | 1 | Phosphoserine Ref.8 Ref.10 Ref.11 | ||||||
| Modified residue | 696 | 1 | Phosphoserine Ref.8 Ref.10 Ref.11 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 18 | 18 | MGDVL…RQHIA → MGWMG in isoform 2. | VSP_041810 | |||||
Experimental info | |||||||||
| Mutagenesis | 641 | 1 | S → A: Loss of melanoma cell invasion; when associated with A-646; A-665; A-681; A-679 and A-683. Ref.8 | ||||||
| Mutagenesis | 641 | 1 | S → D or E: Promotes melanoma cell invasion; when associated with D/E-633; D/E-652; D/E-668; D/E-679 and D/E-683. Ref.8 | ||||||
| Mutagenesis | 646 | 1 | S → A: Loss of melanoma cell invasion; when associated with A-641; A-665; A-681; A-679 and A-683. Ref.8 | ||||||
| Mutagenesis | 646 | 1 | S → D or E: Promotes melanoma cell invasion; when associated with D/E-628; D/E-652; D/E-668; D/E-679 and D/E-683. Ref.8 | ||||||
| Mutagenesis | 665 | 1 | S → A: Loss of melanoma cell invasion; when associated with A-641; A-646; A-681; A-679 and A-683. Ref.8 | ||||||
| Mutagenesis | 665 | 1 | S → D or E: Promotes melanoma cell invasion; when associated with D/E-628; D/E-633; D/E-668; D/E-679 and D/E-683. Ref.8 | ||||||
| Mutagenesis | 681 | 1 | S → A: Loss of melanoma cell invasion; when associated with A-641; A-646; A-665; A-679 and A-683. Ref.8 | ||||||
| Mutagenesis | 681 | 1 | S → D or E: Promotes melanoma cell invasion; when associated with D/E-628; D/E-633; D/E-652; D/E-679 and D/E-683. Ref.8 | ||||||
| Mutagenesis | 692 | 1 | S → A: Loss of melanoma cell invasion; when associated with A-641; A-646; A-665; A-668 and A-683. Ref.8 | ||||||
| Mutagenesis | 692 | 1 | S → D or E: Promotes melanoma cell invasion; when associated with D/E-628; D/E-633; D/E-652; D/E-668 and D/E-683. Ref.8 | ||||||
| Mutagenesis | 696 | 1 | S → A: Loss of melanoma cell invasion; when associated with A-641; A-646; A-665; A-668 and A-679. Ref.8 | ||||||
| Mutagenesis | 696 | 1 | S → D or E: Promotes melanoma cell invasion; when associated with D/E-628; D/E-633; D/E-652; D/E-668 and D/E-679. Ref.8 | ||||||
| Sequence conflict | 318 | 1 | H → L in AAK57556. Ref.1 | ||||||
| Sequence conflict | 677 | 1 | P → L in AAH01979. Ref.7 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Homo sapiens meg-3 mRNA, complete cds." Miyata T., Inagi R., Yasuda Y., Kurokawa K. Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2). |
| [2] | "Differential screening of human osteoclast maturation associated genes." Yamane S., Toyosaki-Maeda T., Tsuruta Y., Suzuki R., Ochi T. Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [3] | "DNA sequence and analysis of human chromosome 9." Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. Dunham I.Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "Preparation of a set of expression-ready clones of mammalian long cDNAs encoding large proteins by the ORF trap cloning method." Nakajima D., Saito K., Yamakawa H., Kikuno R.F., Nakayama M., Ohara R., Okazaki N., Koga H., Nagase T., Ohara O. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 8-746 (ISOFORM 1). |
| [6] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 38-733. Tissue: Testis. |
| [7] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 278-733. Tissue: Cervix. |
| [8] | "Functional proteomics identifies targets of phosphorylation by B-Raf signaling in melanoma." Old W.M., Shabb J.B., Houel S., Wang H., Couts K.L., Yen C.Y., Litman E.S., Croy C.H., Meyer-Arendt K., Miranda J.G., Brown R.A., Witze E.S., Schweppe R.E., Resing K.A., Ahn N.G. Mol. Cell 34:115-131(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PROTEIN SEQUENCE OF 637-650 AND 688-698, MASS SPECTROMETRY, FUNCTION, SUBCELLULAR LOCATION, PHOSPHORYLATION AT SER-641; SER-646; SER-665; SER-681; SER-692 AND SER-696, MUTAGENESIS OF SER-641; SER-646; SER-665; SER-681; SER-692 AND SER-696. |
| [9] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-646; SER-665 AND SER-681, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [10] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-574; SER-601; SER-603; THR-606; SER-609; SER-638; SER-641; SER-646; SER-692 AND SER-696, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [11] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-624; SER-641; SER-646; SER-665; SER-681; SER-692 AND SER-696, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [12] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-568; SER-638; SER-641; SER-646; SER-665 AND SER-681, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [13] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [14] | "FAM129B/MINERVA, a novel adherens junction-associated protein, suppresses apoptosis in HeLa cells." Chen S., Evans H.G., Evans D.R. J. Biol. Chem. 286:10201-10209(2011) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION. |
| [15] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-665 AND SER-681, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF151783 mRNA. Translation: AAK57556.1. AF192911 mRNA. Translation: AAQ13825.1. AL445222, AL390116 Genomic DNA. Translation: CAH72914.1. AL445222, AL390116 Genomic DNA. Translation: CAH72915.1. AL390116, AL445222 Genomic DNA. Translation: CAH73084.1. AL390116, AL445222 Genomic DNA. Translation: CAH73085.1. CH471090 Genomic DNA. Translation: EAW87675.1. CH471090 Genomic DNA. Translation: EAW87677.1. AB210016 mRNA. Translation: BAE06098.1. AL137555 mRNA. Translation: CAB70809.1. BC001979 mRNA. Translation: AAH01979.2. |
| IPI | IPI00456750. IPI00647286. |
| PIR | T46394. |
| RefSeq | NP_001030611.1. NM_001035534.1. NP_073744.2. NM_022833.2. |
| UniGene | Hs.522401. |
3D structure databases | |
| ProteinModelPortal | Q96TA1. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q96TA1. 2 interactions. |
| MINT | MINT-1193681. |
| STRING | 9606.ENSP00000362409. |
PTM databases | |
| PhosphoSite | Q96TA1. |
Polymorphism databases | |
| DMDM | 22256935. |
Proteomic databases | |
| PaxDb | Q96TA1. |
| PRIDE | Q96TA1. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000373312; ENSP00000362409; ENSG00000136830. ENST00000373314; ENSP00000362411; ENSG00000136830. |
| GeneID | 64855. |
| KEGG | hsa:64855. |
| UCSC | uc004brh.3. human. uc004bri.3. human. |
Organism-specific databases | |
| CTD | 64855. |
| GeneCards | GC09M130267. |
| H-InvDB | HIX0008401. |
| HGNC | HGNC:25282. FAM129B. |
| HPA | HPA021284. HPA021417. HPA023261. HPA024312. |
| MIM | 614045. gene. |
| neXtProt | NX_Q96TA1. |
| PharmGKB | PA162385984. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG46977. |
| HOGENOM | HOG000220836. |
| HOVERGEN | HBG026217. |
| OMA | QGFTEVR. |
| OrthoDB | EOG4JQ3X5. |
Gene expression databases | |
| ArrayExpress | Q96TA1. |
| Bgee | Q96TA1. |
| CleanEx | HS_FAM129B. |
| Genevestigator | Q96TA1. |
| GermOnline | ENSG00000136830. Homo sapiens. |
Family and domain databases | |
| Gene3D | 2.30.29.30. 1 hit. |
| InterPro | IPR026088. Niban_like. IPR011993. PH_like_dom. IPR001849. Pleckstrin_homology. [Graphical view] |
| PANTHER | PTHR14392. PTHR14392. 1 hit. |
| SMART | SM00233. PH. 1 hit. [Graphical view] |
| PROSITE | PS50003. PH_DOMAIN. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | FAM129B. human. |
| GenomeRNAi | 64855. |
| NextBio | 66991. |
| SOURCE | Search... |
Entry information
| Entry name | NIBL1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q96TA1 Secondary accession number(s): Q4LE55 Q9NT35 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 9 Human chromosome 9: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
