Q96T17 (MA7D2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 66.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: MAP7 domain-containing protein 2 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 732 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Sequence similarities | Belongs to the MAP7 family. |
| Sequence caution | The sequence BAC05407.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Alternative products
| This entry describes 5 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q96T17-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q96T17-2) The sequence of this isoform differs from the canonical sequence as follows: 198-198: R → RAHHMHLSPMEAILVSRLLTPTQSSLARSRASVMLSGQANDS | ||||||
| Isoform 3 (identifier: Q96T17-3) The sequence of this isoform differs from the canonical sequence as follows: 161-161: D → DGESENTPPPPLGLAASTLPPDAGTTAAAAESTN 198-201: RVFH → QAEG 202-732: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 4 (identifier: Q96T17-4) The sequence of this isoform differs from the canonical sequence as follows: 162-206: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 5 (identifier: Q96T17-5) The sequence of this isoform differs from the canonical sequence as follows: 1-44: Missing. 199-206: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 732 | 732 | MAP7 domain-containing protein 2 | PRO_0000306809 | |||||
Regions | |||||||||
| Coiled coil | 51 – 146 | 96 | Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 195 | 1 | Phosphoserine By similarity | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 44 | 44 | Missing in isoform 5. | VSP_044657 | |||||
| Alternative sequence | 161 | 1 | D → DGESENTPPPPLGLAASTLP PDAGTTAAAAESTN in isoform 3. | VSP_028490 | |||||
| Alternative sequence | 162 – 206 | 45 | Missing in isoform 4. | VSP_043337 | |||||
| Alternative sequence | 198 – 201 | 4 | RVFH → QAEG in isoform 3. | VSP_028491 | |||||
| Alternative sequence | 198 | 1 | R → RAHHMHLSPMEAILVSRLLT PTQSSLARSRASVMLSGQAN DS in isoform 2. | VSP_028492 | |||||
| Alternative sequence | 199 – 206 | 8 | Missing in isoform 5. | VSP_044658 | |||||
| Alternative sequence | 202 – 732 | 531 | Missing in isoform 3. | VSP_028493 | |||||
| Natural variant | 32 | 1 | A → P in a breast cancer sample; somatic mutation. Ref.5 | VAR_035450 | |||||
| Natural variant | 182 | 1 | N → S. Ref.3 Corresponds to variant rs34519770 [ dbSNP | Ensembl ]. | VAR_035313 | |||||
Experimental info | |||||||||
| Sequence conflict | 14 | 1 | P → L in AAH89400. Ref.3 | ||||||
| Sequence conflict | 423 | 1 | L → V in BAB55093. Ref.1 | ||||||
| Sequence conflict | 557 | 1 | S → P in BAB55093. Ref.1 | ||||||
| Sequence conflict | 590 | 1 | N → S in BAH11884. Ref.1 | ||||||
Sequences
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References
| [1] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1; 4 AND 5), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 67-732 (ISOFORM 3). Tissue: Brain, Teratocarcinoma and Thalamus. |
| [2] | "The DNA sequence of the human X chromosome." Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C. Bentley D.R.Nature 434:325-337(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2), VARIANT SER-182. Tissue: Liver, Lymph and Testis. |
| [4] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [5] | "The consensus coding sequences of human breast and colorectal cancers." Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V. Velculescu V.E.Science 314:268-274(2006) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT [LARGE SCALE ANALYSIS] PRO-32. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AK027409 mRNA. Translation: BAB55093.1. AK098768 mRNA. Translation: BAC05407.1. Different initiation. AK294788 mRNA. Translation: BAH11884.1. AK296319 mRNA. Translation: BAH12313.1. AL732366 Genomic DNA. Translation: CAI40549.1. BC037165 mRNA. Translation: AAH37165.1. BC089400 mRNA. Translation: AAH89400.1. BC136379 mRNA. Translation: AAI36380.1. |
| IPI | IPI00167142. IPI00554579. IPI00844217. IPI00922426. IPI00942170. |
| RefSeq | NP_001161937.1. NM_001168465.1. NP_001161938.1. NM_001168466.1. NP_001161939.1. NM_001168467.1. NP_689993.2. NM_152780.3. |
| UniGene | Hs.127951. |
3D structure databases | |
| ProteinModelPortal | Q96T17. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 9606.ENSP00000368972. |
PTM databases | |
| PhosphoSite | Q96T17. |
Polymorphism databases | |
| DMDM | 296434580. |
Proteomic databases | |
| PaxDb | Q96T17. |
| PRIDE | Q96T17. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000379643; ENSP00000368964; ENSG00000184368. ENST00000379651; ENSP00000368972; ENSG00000184368. ENST00000443379; ENSP00000388239; ENSG00000184368. ENST00000452324; ENSP00000413301; ENSG00000184368. |
| GeneID | 256714. |
| KEGG | hsa:256714. |
| UCSC | uc004czr.2. human. uc010nfo.2. human. |
Organism-specific databases | |
| CTD | 256714. |
| GeneCards | GC0XM020024. |
| H-InvDB | HIX0016691. |
| HGNC | HGNC:25899. MAP7D2. |
| HPA | HPA051508. |
| neXtProt | NX_Q96T17. |
| PharmGKB | PA162394971. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG127918. |
| HOGENOM | HOG000232157. |
| HOVERGEN | HBG055348. |
| OMA | AMIEKQK. |
| OrthoDB | EOG4TF0MP. |
| PhylomeDB | Q96T17. |
Gene expression databases | |
| ArrayExpress | Q96T17. |
| Bgee | Q96T17. |
| CleanEx | HS_MAP7D2. |
| Genevestigator | Q96T17. |
Family and domain databases | |
| InterPro | IPR008604. E-MAP-115. [Graphical view] |
| PANTHER | PTHR15073. PTHR15073. 1 hit. |
| Pfam | PF05672. MAP7. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | MAP7D2. human. |
| GenomeRNAi | 256714. |
| NextBio | 92856. |
Entry information
| Entry name | MA7D2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q96T17 Secondary accession number(s): B7Z2J8 Q8N792 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome X Human chromosome X: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with
