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Q96T17 (MA7D2_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
MAP7 domain-containing protein 2
Gene names
Name:MAP7D2
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length732 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the MAP7 family.

Sequence caution

The sequence BAC05407.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

Ontologies

Keywords
   Coding sequence diversityAlternative splicing
Polymorphism
   DomainCoiled coil
   PTMPhosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Alternative products

This entry describes 5 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q96T17-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 (identifier: Q96T17-2)

The sequence of this isoform differs from the canonical sequence as follows:
     198-198: R → RAHHMHLSPMEAILVSRLLTPTQSSLARSRASVMLSGQANDS
Isoform 3 (identifier: Q96T17-3)

The sequence of this isoform differs from the canonical sequence as follows:
     161-161: D → DGESENTPPPPLGLAASTLPPDAGTTAAAAESTN
     198-201: RVFH → QAEG
     202-732: Missing.
Note: No experimental confirmation available.
Isoform 4 (identifier: Q96T17-4)

The sequence of this isoform differs from the canonical sequence as follows:
     162-206: Missing.
Note: No experimental confirmation available.
Isoform 5 (identifier: Q96T17-5)

The sequence of this isoform differs from the canonical sequence as follows:
     1-44: Missing.
     199-206: Missing.
Note: No experimental confirmation available.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 732732MAP7 domain-containing protein 2
PRO_0000306809

Regions

Coiled coil51 – 14696 Potential

Amino acid modifications

Modified residue1951Phosphoserine By similarity

Natural variations

Alternative sequence1 – 4444Missing in isoform 5.
VSP_044657
Alternative sequence1611D → DGESENTPPPPLGLAASTLP PDAGTTAAAAESTN in isoform 3.
VSP_028490
Alternative sequence162 – 20645Missing in isoform 4.
VSP_043337
Alternative sequence198 – 2014RVFH → QAEG in isoform 3.
VSP_028491
Alternative sequence1981R → RAHHMHLSPMEAILVSRLLT PTQSSLARSRASVMLSGQAN DS in isoform 2.
VSP_028492
Alternative sequence199 – 2068Missing in isoform 5.
VSP_044658
Alternative sequence202 – 732531Missing in isoform 3.
VSP_028493
Natural variant321A → P in a breast cancer sample; somatic mutation. Ref.5
VAR_035450
Natural variant1821N → S. Ref.3
Corresponds to variant rs34519770 [ dbSNP | Ensembl ].
VAR_035313

Experimental info

Sequence conflict141P → L in AAH89400. Ref.3
Sequence conflict4231L → V in BAB55093. Ref.1
Sequence conflict5571S → P in BAB55093. Ref.1
Sequence conflict5901N → S in BAH11884. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified May 18, 2010. Version 2.
Checksum: 9F3C004D6942F08E

FASTA73281,965
        10         20         30         40         50         60 
MERGGGGSGT GSRPEGTARG TSLPGKIAEP GAVRTSQPNY RPQGMEGFLK SDERQRLAKE 

        70         80         90        100        110        120 
RREEREKCLA AREQQILEKQ KRARLQYEKQ MEERWRKLEE QRQREDQKRA AVEEKRKQKL 

       130        140        150        160        170        180 
REEEERLEAM MRRSLERTQQ LELKKKYSWG APLAIGPGGH DACDKLSTST MSLPKPTEPP 

       190        200        210        220        230        240 
MNKRLSSSTV AISYSPDRVF HVCPRLAPLG PLNPSYKSSP TRNIEKKKAT STSTSGAGDV 

       250        260        270        280        290        300 
GKEALSGGEA SLVEKVKRGQ RTATSLPVVN FGSPLRRCEF SGGIPKRPSS PVISKTATKA 

       310        320        330        340        350        360 
YPQSPKTTKP PYPGSPVKYR LPALSGQDMP KRKAEKEKSN KEREGTLAQQ AAGPQGEEAL 

       370        380        390        400        410        420 
EKHVVDKHAS EKHAAAAGGK AENSAALGKP TAGTTDAGEA AKILAEKRRQ ARLQKEQEEQ 

       430        440        450        460        470        480 
ERLEKEEQDR LEREELKRKA EEERLRLEEE ARKQEEERKR QEEEKKKQEG EEKRKAGEEA 

       490        500        510        520        530        540 
KRKAEEELLL KEKQEQEKQE KAMIEKQKEA AETKAREVAE QMRLEREQIM LQIEQERLER 

       550        560        570        580        590        600 
KKRIDEIMKR TRKSDVSPQV KKEDPKVGVQ PAVCVEKKTK LVVPNKMEIN GLNTCQEVNG 

       610        620        630        640        650        660 
VDHAAPETYP QDIFSNGLKP AGGLIHLDAL DGKSNSLDDS TEEVQSMDVS PVSKEELISI 

       670        680        690        700        710        720 
PEFSPVSEMI PGVSLDQNGT GNARALQDLL DFTGPPTFPK RSSENLSLDD CNKNLIEGFN 

       730 
SPGQETPLNT FC 

« Hide

Isoform 2 [UniParc].

Checksum: 22097F6CE24953C0
Show »

FASTA77386,349
Isoform 3 [UniParc].

Checksum: A975E2E6AD4083AB
Show »

FASTA23426,071
Isoform 4 [UniParc].

Checksum: E1544B277C4FB5E2
Show »

FASTA68777,034
Isoform 5 [UniParc].

Checksum: 3E3721049F201381
Show »

FASTA68076,647

References

[1]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1; 4 AND 5), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 67-732 (ISOFORM 3).
Tissue: Brain, Teratocarcinoma and Thalamus.
[2]"The DNA sequence of the human X chromosome."
Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C. expand/collapse author list , Hurles M.E., Andrews T.D., Scott C.E., Searle S., Ramser J., Whittaker A., Deadman R., Carter N.P., Hunt S.E., Chen R., Cree A., Gunaratne P., Havlak P., Hodgson A., Metzker M.L., Richards S., Scott G., Steffen D., Sodergren E., Wheeler D.A., Worley K.C., Ainscough R., Ambrose K.D., Ansari-Lari M.A., Aradhya S., Ashwell R.I., Babbage A.K., Bagguley C.L., Ballabio A., Banerjee R., Barker G.E., Barlow K.F., Barrett I.P., Bates K.N., Beare D.M., Beasley H., Beasley O., Beck A., Bethel G., Blechschmidt K., Brady N., Bray-Allen S., Bridgeman A.M., Brown A.J., Brown M.J., Bonnin D., Bruford E.A., Buhay C., Burch P., Burford D., Burgess J., Burrill W., Burton J., Bye J.M., Carder C., Carrel L., Chako J., Chapman J.C., Chavez D., Chen E., Chen G., Chen Y., Chen Z., Chinault C., Ciccodicola A., Clark S.Y., Clarke G., Clee C.M., Clegg S., Clerc-Blankenburg K., Clifford K., Cobley V., Cole C.G., Conquer J.S., Corby N., Connor R.E., David R., Davies J., Davis C., Davis J., Delgado O., Deshazo D., Dhami P., Ding Y., Dinh H., Dodsworth S., Draper H., Dugan-Rocha S., Dunham A., Dunn M., Durbin K.J., Dutta I., Eades T., Ellwood M., Emery-Cohen A., Errington H., Evans K.L., Faulkner L., Francis F., Frankland J., Fraser A.E., Galgoczy P., Gilbert J., Gill R., Gloeckner G., Gregory S.G., Gribble S., Griffiths C., Grocock R., Gu Y., Gwilliam R., Hamilton C., Hart E.A., Hawes A., Heath P.D., Heitmann K., Hennig S., Hernandez J., Hinzmann B., Ho S., Hoffs M., Howden P.J., Huckle E.J., Hume J., Hunt P.J., Hunt A.R., Isherwood J., Jacob L., Johnson D., Jones S., de Jong P.J., Joseph S.S., Keenan S., Kelly S., Kershaw J.K., Khan Z., Kioschis P., Klages S., Knights A.J., Kosiura A., Kovar-Smith C., Laird G.K., Langford C., Lawlor S., Leversha M., Lewis L., Liu W., Lloyd C., Lloyd D.M., Loulseged H., Loveland J.E., Lovell J.D., Lozado R., Lu J., Lyne R., Ma J., Maheshwari M., Matthews L.H., McDowall J., McLaren S., McMurray A., Meidl P., Meitinger T., Milne S., Miner G., Mistry S.L., Morgan M., Morris S., Mueller I., Mullikin J.C., Nguyen N., Nordsiek G., Nyakatura G., O'dell C.N., Okwuonu G., Palmer S., Pandian R., Parker D., Parrish J., Pasternak S., Patel D., Pearce A.V., Pearson D.M., Pelan S.E., Perez L., Porter K.M., Ramsey Y., Reichwald K., Rhodes S., Ridler K.A., Schlessinger D., Schueler M.G., Sehra H.K., Shaw-Smith C., Shen H., Sheridan E.M., Shownkeen R., Skuce C.D., Smith M.L., Sotheran E.C., Steingruber H.E., Steward C.A., Storey R., Swann R.M., Swarbreck D., Tabor P.E., Taudien S., Taylor T., Teague B., Thomas K., Thorpe A., Timms K., Tracey A., Trevanion S., Tromans A.C., d'Urso M., Verduzco D., Villasana D., Waldron L., Wall M., Wang Q., Warren J., Warry G.L., Wei X., West A., Whitehead S.L., Whiteley M.N., Wilkinson J.E., Willey D.L., Williams G., Williams L., Williamson A., Williamson H., Wilming L., Woodmansey R.L., Wray P.W., Yen J., Zhang J., Zhou J., Zoghbi H., Zorilla S., Buck D., Reinhardt R., Poustka A., Rosenthal A., Lehrach H., Meindl A., Minx P.J., Hillier L.W., Willard H.F., Wilson R.K., Waterston R.H., Rice C.M., Vaudin M., Coulson A., Nelson D.L., Weinstock G., Sulston J.E., Durbin R.M., Hubbard T., Gibbs R.A., Beck S., Rogers J., Bentley D.R.
Nature 434:325-337(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2), VARIANT SER-182.
Tissue: Liver, Lymph and Testis.
[4]"Lysine acetylation targets protein complexes and co-regulates major cellular functions."
Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M.
Science 325:834-840(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[5]"The consensus coding sequences of human breast and colorectal cancers."
Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V. expand/collapse author list , Gazdar A.F., Hartigan J., Wu L., Liu C., Parmigiani G., Park B.H., Bachman K.E., Papadopoulos N., Vogelstein B., Kinzler K.W., Velculescu V.E.
Science 314:268-274(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: VARIANT [LARGE SCALE ANALYSIS] PRO-32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK027409 mRNA. Translation: BAB55093.1.
AK098768 mRNA. Translation: BAC05407.1. Different initiation.
AK294788 mRNA. Translation: BAH11884.1.
AK296319 mRNA. Translation: BAH12313.1.
AL732366 Genomic DNA. Translation: CAI40549.1.
BC037165 mRNA. Translation: AAH37165.1.
BC089400 mRNA. Translation: AAH89400.1.
BC136379 mRNA. Translation: AAI36380.1.
IPIIPI00167142.
IPI00554579.
IPI00844217.
IPI00922426.
IPI00942170.
RefSeqNP_001161937.1. NM_001168465.1.
NP_001161938.1. NM_001168466.1.
NP_001161939.1. NM_001168467.1.
NP_689993.2. NM_152780.3.
UniGeneHs.127951.

3D structure databases

ProteinModelPortalQ96T17.
ModBaseSearch...

Protein-protein interaction databases

STRING9606.ENSP00000368972.

PTM databases

PhosphoSiteQ96T17.

Polymorphism databases

DMDM296434580.

Proteomic databases

PaxDbQ96T17.
PRIDEQ96T17.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000379643; ENSP00000368964; ENSG00000184368.
ENST00000379651; ENSP00000368972; ENSG00000184368.
ENST00000443379; ENSP00000388239; ENSG00000184368.
ENST00000452324; ENSP00000413301; ENSG00000184368.
GeneID256714.
KEGGhsa:256714.
UCSCuc004czr.2. human.
uc010nfo.2. human.

Organism-specific databases

CTD256714.
GeneCardsGC0XM020024.
H-InvDBHIX0016691.
HGNCHGNC:25899. MAP7D2.
HPAHPA051508.
neXtProtNX_Q96T17.
PharmGKBPA162394971.
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG127918.
HOGENOMHOG000232157.
HOVERGENHBG055348.
OMAAMIEKQK.
OrthoDBEOG4TF0MP.
PhylomeDBQ96T17.

Gene expression databases

ArrayExpressQ96T17.
BgeeQ96T17.
CleanExHS_MAP7D2.
GenevestigatorQ96T17.

Family and domain databases

InterProIPR008604. E-MAP-115.
[Graphical view]
PANTHERPTHR15073. PTHR15073. 1 hit.
PfamPF05672. MAP7. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSMAP7D2. human.
GenomeRNAi256714.
NextBio92856.

Entry information

Entry nameMA7D2_HUMAN
AccessionPrimary (citable) accession number: Q96T17
Secondary accession number(s): B7Z2J8 expand/collapse secondary AC list , B7Z3S7, B9EGC7, C9JMA4, C9JYW0, Q5EBN1, Q5JPS7, Q6PIC7, Q8N792
Entry history
Integrated into UniProtKB/Swiss-Prot: October 2, 2007
Last sequence update: May 18, 2010
Last modified: April 3, 2013
This is version 66 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome X

Human chromosome X: entries, gene names and cross-references to MIM

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

SIMILARITY comments

Index of protein domains and families