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Q96S59

- RANB9_HUMAN

UniProt

Q96S59 - RANB9_HUMAN

Protein

Ran-binding protein 9

Gene

RANBP9

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 117 (01 Oct 2014)
      Sequence version 1 (01 Dec 2001)
      Previous versions | rss
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    Functioni

    May act as an adapter protein to couple membrane receptors to intracellular signaling pathways. May be involved in signaling of ITGB2/LFA-1 and other integrins. Enhances HGF-MET signaling by recruiting Sos and activating the Ras pathway. Enhances dihydrotestosterone-induced transactivation activity of AR, as well as dexamethasone-induced transactivation activity of NR3C1, but not affect estrogen-induced transactivation. Stabilizes TP73 isoform Alpha, probably by inhibiting its ubiquitination, and increases its proapoptotic activity. Inhibits the kinase activity of DYRK1A and DYRK1B. Inhibits FMR1 binding to RNA By similarity.By similarity

    GO - Molecular functioni

    1. enzyme binding Source: UniProtKB
    2. protein binding Source: UniProtKB
    3. Ran GTPase binding Source: ProtInc

    GO - Biological processi

    1. axon guidance Source: Reactome
    2. microtubule nucleation Source: UniProtKB
    3. protein complex assembly Source: ProtInc

    Enzyme and pathway databases

    ReactomeiREACT_22205. L1CAM interactions.
    SignaLinkiQ96S59.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ran-binding protein 9
    Short name:
    RanBP9
    Alternative name(s):
    BPM-L
    BPM90
    Ran-binding protein M
    Short name:
    RanBPM
    RanBP7
    Gene namesi
    Name:RANBP9
    Synonyms:RANBPM
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 6

    Organism-specific databases

    HGNCiHGNC:13727. RANBP9.

    Subcellular locationi

    Cytoplasmcytosol. Nucleus
    Note: =Predominantly cytoplasmic. A phosphorylated form is associated with the plasma membrane.

    GO - Cellular componenti

    1. cytosol Source: Reactome
    2. microtubule associated complex Source: ProtInc
    3. nucleus Source: UniProtKB

    Keywords - Cellular componenti

    Cytoplasm, Nucleus

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA34215.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 729729Ran-binding protein 9PRO_0000097169Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei405 – 4051N6-acetyllysine1 Publication
    Modified residuei487 – 4871Phosphoserine1 Publication

    Post-translational modificationi

    Phosphorylated in response to stress. Can be phosphorylated by the cleaved p110 form of CDC2L1 (p110C).3 Publications
    Ubiquitinated. Polyubiquitination targets the protein for rapid degradation via the ubiquitin system. Can be deubiquitinated by USP11.1 Publication

    Keywords - PTMi

    Acetylation, Phosphoprotein, Ubl conjugation

    Proteomic databases

    MaxQBiQ96S59.
    PaxDbiQ96S59.
    PRIDEiQ96S59.

    PTM databases

    PhosphoSiteiQ96S59.

    Expressioni

    Tissue specificityi

    Ubiquitously expressed, with highest levels in testes, placenta, heart, and muscle, and lowest levels in lung. Within the brain, expressed predominantly by neurons in the gray matter of cortex, the granular layer of cerebellum and the Purkinje cells.3 Publications

    Gene expression databases

    ArrayExpressiQ96S59.
    BgeeiQ96S59.
    CleanExiHS_RANBP9.
    GenevestigatoriQ96S59.

    Organism-specific databases

    HPAiCAB033767.
    HPA050007.

    Interactioni

    Subunit structurei

    Interacts with NGFR and DDX4 By similarity. Interacts with GTP-bound Ran, AR, CDC2L1/p110C, CALB1, S100A7, USP11, MKLN1, SOS1 or SOS2, GID8, and FMR1. Interacts with the Dyrk kinases HIPK2, DYRK1A, and DYRK1B. Interacts with TP73 isoform Alpha but not with TP53. Interacts with the HGF receptor MET and the integrins ITGB1 and ITGB2, but not with ITGAL. Part of a complex consisting of RANBP9, MKLN1 and GID8. Part of a complex consisting of RANBP9, RAN, DYRK1B and COPS5. Directly interacts with RANBP10.By similarity15 Publications

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    DISC1Q9NRI56EBI-636085,EBI-529989
    DYRK1BQ9Y4634EBI-636085,EBI-634187
    ENTPD1P499615EBI-636085,EBI-8074749
    Grm2P314214EBI-636085,EBI-7090147From a different organism.
    OPRM1P353725EBI-636085,EBI-2624570
    PPP1CCP36873-23EBI-636085,EBI-3964623
    S100A7P311513EBI-636085,EBI-357520

    Protein-protein interaction databases

    BioGridi115359. 71 interactions.
    IntActiQ96S59. 34 interactions.
    MINTiMINT-243263.
    STRINGi9606.ENSP00000011619.

    Structurei

    3D structure databases

    ProteinModelPortaliQ96S59.
    SMRiQ96S59. Positions 216-325.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini147 – 334188B30.2/SPRYPROSITE-ProRule annotationAdd
    BLAST
    Domaini365 – 39733LisHPROSITE-ProRule annotationAdd
    BLAST
    Domaini403 – 46058CTLHPROSITE-ProRule annotationAdd
    BLAST

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni401 – 4077Interaction with CALB1Curated
    Regioni615 – 729115Interaction with FMR1Add
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi5 – 106Poly-Pro
    Compositional biasi11 – 188Poly-Gln
    Compositional biasi21 – 244Poly-Pro
    Compositional biasi25 – 131107Ala-richAdd
    BLAST
    Compositional biasi62 – 665Poly-Ala
    Compositional biasi71 – 777Poly-Pro
    Compositional biasi82 – 9211Poly-ProAdd
    BLAST

    Domaini

    The SPRY domain mediates the interaction with MET, AR, and CDC2L1.

    Sequence similaritiesi

    Belongs to the RANBP9/10 family.Curated
    Contains 1 B30.2/SPRY domain.PROSITE-ProRule annotation
    Contains 1 CTLH domain.PROSITE-ProRule annotation
    Contains 1 LisH domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiNOG316575.
    HOGENOMiHOG000008133.
    HOVERGENiHBG053444.
    InParanoidiQ96S59.
    OMAiYSNPWAS.
    OrthoDBiEOG76MK7Z.
    PhylomeDBiQ96S59.
    TreeFamiTF331658.

    Family and domain databases

    InterProiIPR001870. B30.2/SPRY.
    IPR008985. ConA-like_lec_gl_sf.
    IPR013144. CRA_dom.
    IPR024964. CTLH/CRA.
    IPR006595. CTLH_C.
    IPR006594. LisH_dimerisation.
    IPR013720. LisH_dimerisation_subgr.
    IPR018355. SPla/RYanodine_receptor_subgr.
    IPR003877. SPRY_rcpt.
    [Graphical view]
    PfamiPF10607. CLTH. 1 hit.
    PF08513. LisH. 1 hit.
    PF00622. SPRY. 1 hit.
    [Graphical view]
    SMARTiSM00757. CRA. 1 hit.
    SM00668. CTLH. 1 hit.
    SM00667. LisH. 1 hit.
    SM00449. SPRY. 1 hit.
    [Graphical view]
    SUPFAMiSSF49899. SSF49899. 1 hit.
    PROSITEiPS50188. B302_SPRY. 1 hit.
    PS50897. CTLH. 1 hit.
    PS50896. LISH. 1 hit.
    [Graphical view]

    Sequences (3)i

    Sequence statusi: Complete.

    This entry describes 3 isoformsi produced by alternative splicing. Align

    Isoform 1 (identifier: Q96S59-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MSGQPPPPPP QQQQQQQQLS PPPPAALAPV SGVVLPAPPA VSAGSSPAGS    50
    PGGGAGGEGL GAAAAALLLH PPPPPPPATA APPPPPPPPP PPASAAAPAS 100
    GPPAPPGLAA GPGPAGGAPT PALVAGSSAA APFPHGDSAL NEQEKELQRR 150
    LKRLYPAVDE QETPLPRSWS PKDKFSYIGL SQNNLRVHYK GHGKTPKDAA 200
    SVRATHPIPA ACGIYYFEVK IVSKGRDGYM GIGLSAQGVN MNRLPGWDKH 250
    SYGYHGDDGH SFCSSGTGQP YGPTFTTGDV IGCCVNLINN TCFYTKNGHS 300
    LGIAFTDLPP NLYPTVGLQT PGEVVDANFG QHPFVFDIED YMREWRTKIQ 350
    AQIDRFPIGD REGEWQTMIQ KMVSSYLVHH GYCATAEAFA RSTDQTVLEE 400
    LASIKNRQRI QKLVLAGRMG EAIETTQQLY PSLLERNPNL LFTLKVRQFI 450
    EMVNGTDSEV RCLGGRSPKS QDSYPVSPRP FSSPSMSPSH GMNIHNLASG 500
    KGSTAHFSGF ESCSNGVISN KAHQSYCHSN KHQSSNLNVP ELNSINMSRS 550
    QQVNNFTSND VDMETDHYSN GVGETSSNGF LNGSSKHDHE MEDCDTEMEV 600
    DSSQLRRQLC GGSQAAIERM IHFGRELQAM SEQLRRDCGK NTANKKMLKD 650
    AFSLLAYSDP WNSPVGNQLD PIQREPVCSA LNSAILETHN LPKQPPLALA 700
    MGQATQCLGL MARSGIGSCA FATVEDYLH 729
    Length:729
    Mass (Da):77,847
    Last modified:December 1, 2001 - v1
    Checksum:i50DF1127B7FDA6C8
    GO
    Isoform 2 (identifier: Q96S59-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         1-341: Missing.

    Show »
    Length:388
    Mass (Da):43,064
    Checksum:i28332F38EEB013B8
    GO
    Isoform 3 (identifier: Q96S59-3) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         1-229: Missing.

    Note: No experimental confirmation available.

    Show »
    Length:500
    Mass (Da):55,082
    Checksum:iCB0A1FD22BCF1B82
    GO

    Sequence cautioni

    The sequence AAH19886.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence.
    The sequence AAH52781.1 differs from that shown. Reason: Frameshift at positions 13, 30 and 34.
    The sequence AAK15469.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.
    The sequence BAA23216.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti87 – 871P → S in BAA23216. (PubMed:9817760)Curated

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei1 – 341341Missing in isoform 2. 1 PublicationVSP_013175Add
    BLAST
    Alternative sequencei1 – 229229Missing in isoform 3. 1 PublicationVSP_056049Add
    BLAST

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB055311 mRNA. Translation: BAB62525.1.
    AK313334 mRNA. Translation: BAG36138.1.
    AL441883, Z93020 Genomic DNA. Translation: CAI19841.1.
    Z93020, AL441883 Genomic DNA. Translation: CAI21594.1.
    BC019886 mRNA. Translation: AAH19886.1. Sequence problems.
    BC052781 mRNA. Translation: AAH52781.1. Frameshift.
    BC063849 mRNA. Translation: AAH63849.1.
    AB008515 mRNA. Translation: BAA23216.1. Different initiation.
    AF306510 mRNA. Translation: AAK15469.1. Different initiation.
    CCDSiCCDS4529.1. [Q96S59-1]
    RefSeqiNP_005484.2. NM_005493.2. [Q96S59-1]
    XP_006715008.1. XM_006714945.1.
    UniGeneiHs.708182.

    Genome annotation databases

    EnsembliENST00000011619; ENSP00000011619; ENSG00000010017. [Q96S59-1]
    ENST00000539980; ENSP00000438162; ENSG00000010017.
    GeneIDi10048.
    KEGGihsa:10048.
    UCSCiuc003nba.3. human. [Q96S59-1]

    Polymorphism databases

    DMDMi61215334.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Web resourcesi

    Atlas of Genetics and Cytogenetics in Oncology and Haematology

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB055311 mRNA. Translation: BAB62525.1 .
    AK313334 mRNA. Translation: BAG36138.1 .
    AL441883 , Z93020 Genomic DNA. Translation: CAI19841.1 .
    Z93020 , AL441883 Genomic DNA. Translation: CAI21594.1 .
    BC019886 mRNA. Translation: AAH19886.1 . Sequence problems.
    BC052781 mRNA. Translation: AAH52781.1 . Frameshift.
    BC063849 mRNA. Translation: AAH63849.1 .
    AB008515 mRNA. Translation: BAA23216.1 . Different initiation.
    AF306510 mRNA. Translation: AAK15469.1 . Different initiation.
    CCDSi CCDS4529.1. [Q96S59-1 ]
    RefSeqi NP_005484.2. NM_005493.2. [Q96S59-1 ]
    XP_006715008.1. XM_006714945.1.
    UniGenei Hs.708182.

    3D structure databases

    ProteinModelPortali Q96S59.
    SMRi Q96S59. Positions 216-325.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 115359. 71 interactions.
    IntActi Q96S59. 34 interactions.
    MINTi MINT-243263.
    STRINGi 9606.ENSP00000011619.

    PTM databases

    PhosphoSitei Q96S59.

    Polymorphism databases

    DMDMi 61215334.

    Proteomic databases

    MaxQBi Q96S59.
    PaxDbi Q96S59.
    PRIDEi Q96S59.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000011619 ; ENSP00000011619 ; ENSG00000010017 . [Q96S59-1 ]
    ENST00000539980 ; ENSP00000438162 ; ENSG00000010017 .
    GeneIDi 10048.
    KEGGi hsa:10048.
    UCSCi uc003nba.3. human. [Q96S59-1 ]

    Organism-specific databases

    CTDi 10048.
    GeneCardsi GC06M013621.
    H-InvDB HIX0032741.
    HGNCi HGNC:13727. RANBP9.
    HPAi CAB033767.
    HPA050007.
    MIMi 603854. gene.
    neXtProti NX_Q96S59.
    PharmGKBi PA34215.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG316575.
    HOGENOMi HOG000008133.
    HOVERGENi HBG053444.
    InParanoidi Q96S59.
    OMAi YSNPWAS.
    OrthoDBi EOG76MK7Z.
    PhylomeDBi Q96S59.
    TreeFami TF331658.

    Enzyme and pathway databases

    Reactomei REACT_22205. L1CAM interactions.
    SignaLinki Q96S59.

    Miscellaneous databases

    ChiTaRSi RANBP9. human.
    GeneWikii RANBP9.
    GenomeRNAii 10048.
    NextBioi 37955.
    PROi Q96S59.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q96S59.
    Bgeei Q96S59.
    CleanExi HS_RANBP9.
    Genevestigatori Q96S59.

    Family and domain databases

    InterProi IPR001870. B30.2/SPRY.
    IPR008985. ConA-like_lec_gl_sf.
    IPR013144. CRA_dom.
    IPR024964. CTLH/CRA.
    IPR006595. CTLH_C.
    IPR006594. LisH_dimerisation.
    IPR013720. LisH_dimerisation_subgr.
    IPR018355. SPla/RYanodine_receptor_subgr.
    IPR003877. SPRY_rcpt.
    [Graphical view ]
    Pfami PF10607. CLTH. 1 hit.
    PF08513. LisH. 1 hit.
    PF00622. SPRY. 1 hit.
    [Graphical view ]
    SMARTi SM00757. CRA. 1 hit.
    SM00668. CTLH. 1 hit.
    SM00667. LisH. 1 hit.
    SM00449. SPRY. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49899. SSF49899. 1 hit.
    PROSITEi PS50188. B302_SPRY. 1 hit.
    PS50897. CTLH. 1 hit.
    PS50896. LISH. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Full-sized RanBPM cDNA encodes a protein possessing a long stretch of proline and glutamine within the N-terminal region, comprising a large protein complex."
      Nishitani H., Hirose E., Uchimura Y., Nakamura M., Umeda M., Nishii K., Mori N., Nishimoto T.
      Gene 272:25-33(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), SUBCELLULAR LOCATION.
    2. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3).
      Tissue: Testis.
    3. "The DNA sequence and analysis of human chromosome 6."
      Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D.
      , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.
      Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    4. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
      Tissue: Lymph, Spinal ganglion and Testis.
    5. "When overexpressed, a novel centrosomal protein, RanBPM, causes ectopic microtubule nucleation similar to gamma-tubulin."
      Nakamura M., Masuda H., Horii J., Kuma K., Yokoyama N., Ohba T., Nishitani H., Miyata T., Tanaka M., Nishimoto T.
      J. Cell Biol. 143:1041-1052(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 85-729 (ISOFORM 1), INTERACTION WITH RAN.
    6. Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 136-729 (ISOFORM 1), INTERACTION WITH HIPK2, SUBCELLULAR LOCATION.
    7. "RanBPM, a nuclear protein that interacts with and regulates transcriptional activity of androgen receptor and glucocorticoid receptor."
      Rao M.A., Cheng H., Quayle A.N., Nishitani H., Nelson C.C., Rennie P.S.
      J. Biol. Chem. 277:48020-48027(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 148-729 (ISOFORM 1), FUNCTION, TISSUE SPECIFICITY, INTERACTION WITH AR.
      Tissue: Prostate.
    8. "Structural and functional characterization of the USP11 deubiquitinating enzyme, which interacts with the RanGTP-associated protein RanBPM."
      Ideguchi H., Ueda A., Tanaka M., Yang J., Tsuji T., Ohno S., Hagiwara E., Aoki A., Ishigatsubo Y.
      Biochem. J. 367:87-95(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: INTERACTION WITH USP11, UBIQUITINATION.
    9. "RanBPM interacts with psoriasin in vitro and their expression correlates with specific clinical features in vivo in breast cancer."
      Emberley E.D., Gietz R.D., Campbell J.D., Hayglass K.T., Murphy L.C., Watson P.H.
      BMC Cancer 2:28-28(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: INTERACTION WITH S100A7.
    10. "Activation of Ras/Erk pathway by a novel MET-interacting protein RanBPM."
      Wang D., Li Z., Messing E.M., Wu G.
      J. Biol. Chem. 277:36216-36222(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: FUNCTION IN RAS SIGNALING, INTERACTION WITH MET AND SOS, TISSUE SPECIFICITY.
    11. "Calbindin D28K interacts with Ran-binding protein M: identification of interacting domains by NMR spectroscopy."
      Lutz W., Frank E.M., Craig T.A., Thompson R., Venters R.A., Kojetin D., Cavanagh J., Kumar R.
      Biochem. Biophys. Res. Commun. 303:1186-1192(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: INTERACTION WITH CALB1.
    12. "The cyclin-dependent kinase 11(p46) isoform interacts with RanBPM."
      Mikolajczyk M., Shi J., Vaillancourt R.R., Sachs N.A., Nelson M.
      Biochem. Biophys. Res. Commun. 310:14-18(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: INTERACTION WITH CDC2L1, PHOSPHORYLATION, SUBCELLULAR LOCATION.
    13. "A novel nuclear protein, Twa1, and Muskelin comprise a complex with RanBPM."
      Umeda M., Nishitani H., Nishimoto T.
      Gene 303:47-54(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: INTERACTION WITH MKLN1 AND GID8, IDENTIFICATION IN A COMPLEX WITH MKLN1 AND GID8.
    14. "Serine/threonine kinase Mirk/Dyrk1B is an inhibitor of epithelial cell migration and is negatively regulated by the Met adaptor Ran-binding protein M."
      Zou Y., Lim S., Lee K., Deng X., Friedman E.
      J. Biol. Chem. 278:49573-49581(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: FUNCTION, INTERACTION WITH DYRK1A AND DYRK1B, IDENTIFICATION IN A COMPLEX WITH RAN; DYRK1B AND COPS5.
    15. "A novel MET-interacting protein shares high sequence similarity with RanBPM, but fails to stimulate MET-induced Ras/Erk signaling."
      Wang D., Li Z., Schoen S.R., Messing E.M., Wu G.
      Biochem. Biophys. Res. Commun. 313:320-326(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: INTERACTION WITH RAN AND MET.
    16. "RanBPM is a phosphoprotein that associates with the plasma membrane and interacts with the integrin LFA-1."
      Denti S., Sirri A., Cheli A., Rogge L., Innamorati G., Putignano S., Fabbri M., Pardi R., Bianchi E.
      J. Biol. Chem. 279:13027-13034(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: FUNCTION, INTERACTION WITH ITGB1 AND ITGB2, SUBCELLULAR LOCATION, PHOSPHORYLATION.
    17. "The C-terminus of fragile X mental retardation protein interacts with the multi-domain Ran-binding protein in the microtubule-organising centre."
      Menon R.P., Gibson T.J., Pastore A.
      J. Mol. Biol. 343:43-53(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: FUNCTION, INTERACTION WITH FMR1, TISSUE SPECIFICITY, SUBCELLULAR LOCATION.
    18. "Protein stability and function of p73 are modulated by a physical interaction with RanBPM in mammalian cultured cells."
      Kramer S., Ozaki T., Miyazaki K., Kato C., Hanamoto T., Nakagawara A.
      Oncogene 24:938-944(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH TP73.
    19. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Embryonic kidney.
    20. "RanBP10 acts as a novel coactivator for the androgen receptor."
      Harada N., Yokoyama T., Yamaji R., Nakano Y., Inui H.
      Biochem. Biophys. Res. Commun. 368:121-125(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: FUNCTION, INTERACTION WITH RANBP10, SUBCELLULAR LOCATION.
    21. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-487, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Cervix carcinoma.
    22. "Lysine acetylation targets protein complexes and co-regulates major cellular functions."
      Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M.
      Science 325:834-840(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-405, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    23. "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
      Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
      Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Cervix carcinoma.
    24. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiRANB9_HUMAN
    AccessioniPrimary (citable) accession number: Q96S59
    Secondary accession number(s): A0PJA2
    , B2R8E1, O94764, Q6P3T7, Q7LBR2, Q7Z7F9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 15, 2005
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 117 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 6
      Human chromosome 6: entries, gene names and cross-references to MIM
    2. MIM cross-references
      Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3