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Protein

FANCD2 opposite strand protein

Gene

FANCD2OS

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
FANCD2 opposite strand protein
Alternative name(s):
Fanconi anemia group D2 protein opposite strand transcript protein
Gene namesi
Name:FANCD2OS
Synonyms:C3orf24
ORF Names:HSD19
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 3

Organism-specific databases

HGNCiHGNC:28623. FANCD2OS.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA142672385.

Polymorphism and mutation databases

BioMutaiFANCD2OS.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 177177FANCD2 opposite strand proteinPRO_0000235343Add
BLAST

Proteomic databases

PaxDbiQ96PS1.
PRIDEiQ96PS1.

PTM databases

iPTMnetiQ96PS1.
PhosphoSiteiQ96PS1.

Expressioni

Gene expression databases

BgeeiENSG00000163705.
CleanExiHS_C3orf24.
ExpressionAtlasiQ96PS1. baseline and differential.
GenevisibleiQ96PS1. HS.

Structurei

3D structure databases

ProteinModelPortaliQ96PS1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IIPW. Eukaryota.
ENOG4111RHB. LUCA.
GeneTreeiENSGT00390000000631.
HOGENOMiHOG000116121.
HOVERGENiHBG056743.
InParanoidiQ96PS1.
OMAiREHQWPT.
OrthoDBiEOG091G0LR1.
PhylomeDBiQ96PS1.
TreeFamiTF337186.

Family and domain databases

InterProiIPR027966. FANCD2OS.
[Graphical view]
PANTHERiPTHR31036. PTHR31036. 1 hit.
PfamiPF15124. DUF4563. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q96PS1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGYQLWSPW TPLDESFQWL RHTTPTPSSK HPFKASPCFP HTPSDLEVQL
60 70 80 90 100
CFQEVTLVLD SPFLESGVSP KLPCHTSELR TMNNKGLVRK PQPIRLSGVD
110 120 130 140 150
SVFGRVITAQ PPKWTGTFRV SDKSAFCKII SREHQWPIGL KEPQIQMTVT
160 170
MCKQMLRSIL LLYATYKKCT FALQHSK
Length:177
Mass (Da):20,188
Last modified:December 1, 2001 - v1
Checksum:i4D193F8362CB6BEB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF230334 mRNA. Translation: AAL05979.1.
AY248899 mRNA. Translation: AAP20050.1.
AC034193 Genomic DNA. No translation available.
BC028122 mRNA. Translation: AAH28122.1.
CCDSiCCDS2596.1.
RefSeqiNP_001158311.1. NM_001164839.1.
NP_775743.1. NM_173472.1.
XP_011531633.1. XM_011533331.2.
UniGeneiHs.190413.

Genome annotation databases

EnsembliENST00000450660; ENSP00000429608; ENSG00000163705.
ENST00000524279; ENSP00000429663; ENSG00000163705.
GeneIDi115795.
KEGGihsa:115795.
UCSCiuc003buz.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF230334 mRNA. Translation: AAL05979.1.
AY248899 mRNA. Translation: AAP20050.1.
AC034193 Genomic DNA. No translation available.
BC028122 mRNA. Translation: AAH28122.1.
CCDSiCCDS2596.1.
RefSeqiNP_001158311.1. NM_001164839.1.
NP_775743.1. NM_173472.1.
XP_011531633.1. XM_011533331.2.
UniGeneiHs.190413.

3D structure databases

ProteinModelPortaliQ96PS1.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

iPTMnetiQ96PS1.
PhosphoSiteiQ96PS1.

Polymorphism and mutation databases

BioMutaiFANCD2OS.

Proteomic databases

PaxDbiQ96PS1.
PRIDEiQ96PS1.

Protocols and materials databases

DNASUi115795.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000450660; ENSP00000429608; ENSG00000163705.
ENST00000524279; ENSP00000429663; ENSG00000163705.
GeneIDi115795.
KEGGihsa:115795.
UCSCiuc003buz.3. human.

Organism-specific databases

CTDi115795.
GeneCardsiFANCD2OS.
HGNCiHGNC:28623. FANCD2OS.
neXtProtiNX_Q96PS1.
PharmGKBiPA142672385.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IIPW. Eukaryota.
ENOG4111RHB. LUCA.
GeneTreeiENSGT00390000000631.
HOGENOMiHOG000116121.
HOVERGENiHBG056743.
InParanoidiQ96PS1.
OMAiREHQWPT.
OrthoDBiEOG091G0LR1.
PhylomeDBiQ96PS1.
TreeFamiTF337186.

Miscellaneous databases

GenomeRNAii115795.
PROiQ96PS1.

Gene expression databases

BgeeiENSG00000163705.
CleanExiHS_C3orf24.
ExpressionAtlasiQ96PS1. baseline and differential.
GenevisibleiQ96PS1. HS.

Family and domain databases

InterProiIPR027966. FANCD2OS.
[Graphical view]
PANTHERiPTHR31036. PTHR31036. 1 hit.
PfamiPF15124. DUF4563. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiFACOS_HUMAN
AccessioniPrimary (citable) accession number: Q96PS1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: December 1, 2001
Last modified: September 7, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 3
    Human chromosome 3: entries, gene names and cross-references to MIM

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.