Q96PF2 (TSSK2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 122.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Testis-specific serine/threonine-protein kinase 2 Short name=TSK-2 Short name=TSK2 Short name=TSSK-2 Short name=Testis-specific kinase 2 EC=2.7.11.1 Alternative name(s): DiGeorge syndrome protein G Short name=DGS-G Serine/threonine-protein kinase 22B | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 358 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Testis-specific serine/threonine-protein kinase required during spermatid development. Phosphorylates TSKS at 'Ser-288' and SPAG16. Involved in the late stages of spermatogenesis, during the reconstruction of the cytoplasm. During spermatogenesis, required for the transformation of a ring-shaped structure around the base of the flagellum originating from the chromatoid body. Ref.2 Ref.8 Ref.9 |
| Catalytic activity | ATP + a protein = ADP + a phosphoprotein. Ref.9 |
| Cofactor | Magnesium. Ref.9 |
| Enzyme regulation | Activated by phosphorylation on Thr-174, potentially by autophosphorylation By similarity. |
| Subunit structure | |
| Subcellular location | Cytoplasm By similarity. Cytoplasm › cytoskeleton › centrosome › centriole. Note: Present in the cytoplasm of elongating spermatids. In spermatozoa, localizes in the equatorial segment, neck, the midpiece and in a specific sperm head compartment By similarity. In spermatids, concentrates in centrioles during flagellogenesis. Ref.7 |
| Tissue specificity | Testis-specific. Present in mature spermatozoa (at protein level). Ref.2 Ref.8 Ref.9 |
| Post-translational modification | |
| Miscellaneous | TSSK1B might be used as a target for male contraception or and intra-vaginal spermicides (Ref.6). |
| Sequence similarities | Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. Contains 1 protein kinase domain. |
| Biophysicochemical properties | Kinetic parameters: KM=10 µM for ATP Ref.9 |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| itself | 2 | EBI-852089,EBI-852089 | ||
| TSKS | Q9UJT2 | 3 | EBI-852089,EBI-852101 | |
| TSKS | Q9UJT2-2 | 2 | EBI-852089,EBI-852113 |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 358 | 358 | Testis-specific serine/threonine-protein kinase 2 | PRO_0000086768 | |||||
Regions | |||||||||
| Domain | 12 – 272 | 261 | Protein kinase | ||||||
| Nucleotide binding | 18 – 26 | 9 | ATP By similarity | ||||||
Sites | |||||||||
| Active site | 136 | 1 | Proton acceptor By similarity | ||||||
| Binding site | 41 | 1 | ATP By similarity | ||||||
Natural variations | |||||||||
| Natural variant | 27 | 1 | K → R May be associated with infertility. Ref.10 Ref.11 Corresponds to variant rs3747052 [ dbSNP | Ensembl ]. | VAR_041241 | |||||
| Natural variant | 61 | 1 | M → V. Ref.10 | VAR_041242 | |||||
| Natural variant | 197 | 1 | Y → C. Ref.10 | VAR_041243 | |||||
| Natural variant | 244 | 1 | E → K. Corresponds to variant rs35048893 [ dbSNP | Ensembl ]. | VAR_051677 | |||||
| Natural variant | 245 | 1 | C → S. Corresponds to variant rs8140743 [ dbSNP | Ensembl ]. | VAR_059770 | |||||
| Natural variant | 280 | 1 | T → M. Ref.10 Corresponds to variant rs1052763 [ dbSNP | Ensembl ]. | VAR_041244 | |||||
Experimental info | |||||||||
| Sequence conflict | 279 | 1 | A → P in AAK98531. Ref.2 | ||||||
| Sequence conflict | 304 | 1 | G → D in AAH37781. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "A transcription map of the DiGeorge and velo-cardio-facial syndrome minimal critical region on 22q11." Gong W., Emanuel B.S., Collins J., Kim D.H., Wang Z., Chen F., Zhang G., Roe B., Budarf M.L. Hum. Mol. Genet. 5:789-800(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "Expression analysis of the human testis-specific serine/threonine kinase (TSSK) homologues. A TSSK member is present in the equatorial segment of human sperm." Hao Z., Jha K.N., Kim Y.H., Vemuganti S., Westbrook V.A., Chertihin O., Markgraf K., Flickinger C.J., Coppola M., Herr J.C., Visconti P.E. Mol. Hum. Reprod. 10:433-444(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AUTOPHOSPHORYLATION, TISSUE SPECIFICITY, INTERACTION WITH TSSK1B. |
| [3] | "A genome annotation-driven approach to cloning the human ORFeome." Collins J.E., Wright C.L., Edwards C.A., Davis M.P., Grinham J.A., Cole C.G., Goward M.E., Aguado B., Mallya M., Mokrab Y., Huckle E.J., Beare D.M., Dunham I. Genome Biol. 5:R84.1-R84.11(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [4] | "The DNA sequence of human chromosome 22." Dunham I., Hunt A.R., Collins J.E., Bruskiewich R., Beare D.M., Clamp M., Smink L.J., Ainscough R., Almeida J.P., Babbage A.K., Bagguley C., Bailey J., Barlow K.F., Bates K.N., Beasley O.P., Bird C.P., Blakey S.E., Bridgeman A.M. Wright H.Nature 402:489-495(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Testis. |
| [6] | "Validation of a testis specific serine/threonine kinase [TSSK] family and the substrate of TSSK1 & 2, TSKS, as contraceptive targets." Xu B., Hao Z., Jha K.N., Digilio L., Urekar C., Kim Y.H., Pulido S., Flickinger C.J., Herr J.C. Soc. Reprod. Fertil. Suppl. 63:87-101(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PUTATIVE CONTRACEPTIVE TARGET. |
| [7] | "TSKS concentrates in spermatid centrioles during flagellogenesis." Xu B., Hao Z., Jha K.N., Zhang Z., Urekar C., Digilio L., Pulido S., Strauss J.F. III, Flickinger C.J., Herr J.C. Dev. Biol. 319:201-210(2008) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [8] | "Targeted deletion of Tssk1 and 2 causes male infertility due to haploinsufficiency." Xu B., Hao Z., Jha K.N., Zhang Z., Urekar C., Digilio L., Pulido S., Strauss J.F. III, Flickinger C.J., Herr J.C. Dev. Biol. 319:211-222(2008) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, TISSUE SPECIFICITY, INTERACTION WITH TSKS. |
| [9] | "Expression and localization of five members of the testis-specific serine kinase (Tssk) family in mouse and human sperm and testis." Li Y., Sosnik J., Brassard L., Reese M., Spiridonov N.A., Bates T.C., Johnson G.R., Anguita J., Visconti P.E., Salicioni A.M. Mol. Hum. Reprod. 17:42-56(2011) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, COFACTOR, BIOPHYSICOCHEMICAL PROPERTIES, AUTOPHOSPHORYLATION, CATALYTIC ACTIVITY, TISSUE SPECIFICITY. |
| [10] | "Patterns of somatic mutation in human cancer genomes." Greenman C., Stephens P., Smith R., Dalgliesh G.L., Hunter C., Bignell G., Davies H., Teague J., Butler A., Stevens C., Edkins S., O'Meara S., Vastrik I., Schmidt E.E., Avis T., Barthorpe S., Bhamra G., Buck G. Stratton M.R.Nature 446:153-158(2007) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS [LARGE SCALE ANALYSIS] ARG-27; VAL-61; CYS-197 AND MET-280. |
| [11] | "Some single-nucleotide polymorphisms of the TSSK2 gene may be associated with human spermatogenesis impairment." Zhang H., Su D., Yang Y., Zhang W., Liu Y., Bai G., Ma M., Ma Y., Zhang S. J. Androl. 31:388-392(2010) [PubMed] [Europe PMC] [Abstract] Cited for: CHARACTERIZATION OF VARIANT ARG-27. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | L77564 mRNA. No translation available. AF362953 mRNA. Translation: AAK98531.1. CR456587 mRNA. Translation: CAG30473.1. AC004471 Genomic DNA. No translation available. BC037781 mRNA. Translation: AAH37781.1. |
| IPI | IPI00289715. |
| RefSeq | NP_443732.3. NM_053006.4. |
| UniGene | Hs.694070. |
3D structure databases | |
| ProteinModelPortal | Q96PF2. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q96PF2. 3 interactions. |
| STRING | 9606.ENSP00000382544. |
PTM databases | |
| PhosphoSite | Q96PF2. |
Polymorphism databases | |
| DMDM | 30316269. |
Proteomic databases | |
| PaxDb | Q96PF2. |
| PRIDE | Q96PF2. |
Protocols and materials databases | |
| DNASU | 23617. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000399635; ENSP00000382544; ENSG00000206203. |
| GeneID | 23617. |
| KEGG | hsa:23617. |
| UCSC | uc002zow.2. human. |
Organism-specific databases | |
| CTD | 23617. |
| GeneCards | GC22P019118. |
| HGNC | HGNC:11401. TSSK2. |
| MIM | 610710. gene. |
| neXtProt | NX_Q96PF2. |
| PharmGKB | PA36208. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG0515. |
| HOGENOM | HOG000233016. |
| HOVERGEN | HBG101110. |
| InParanoid | Q96PF2. |
| KO | K08811. |
| OMA | SLAVKYC. |
| OrthoDB | EOG42BX8Q. |
| PhylomeDB | Q96PF2. |
Gene expression databases | |
| ArrayExpress | Q96PF2. |
| Bgee | Q96PF2. |
| CleanEx | HS_TSSK2. |
| Genevestigator | Q96PF2. |
| GermOnline | ENSG00000182490. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR011009. Kinase-like_dom. IPR000719. Prot_kinase_cat_dom. IPR017441. Protein_kinase_ATP_BS. IPR002290. Ser/Thr_dual-sp_kinase_dom. IPR008271. Ser/Thr_kinase_AS. [Graphical view] |
| Pfam | PF00069. Pkinase. 1 hit. [Graphical view] |
| SMART | SM00220. S_TKc. 1 hit. [Graphical view] |
| SUPFAM | SSF56112. Kinase_like. 1 hit. |
| PROSITE | PS00107. PROTEIN_KINASE_ATP. 1 hit. PS50011. PROTEIN_KINASE_DOM. 1 hit. PS00108. PROTEIN_KINASE_ST. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| BindingDB | Q96PF2. |
| ChEMBL | CHEMBL6014. |
| GenomeRNAi | 23617. |
| NextBio | 46342. |
| SOURCE | Search... |
Entry information
| Entry name | TSSK2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q96PF2 Secondary accession number(s): Q8IY55 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human and mouse protein kinases Human and mouse protein kinases: classification and index |
| Human chromosome 22 Human chromosome 22: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
