Reviewed, UniProtKB/Swiss-Prot Q96M91 (CCD11_HUMAN)

Names and origin

Protein names

Recommended name:
    Coiled-coil domain-containing protein 11

Gene names

Name:

CCDC11

Organism

Homo sapiens (Human) [Complete proteome]

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	514 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Coding sequence diversity	Polymorphism
Domain	Coiled coil
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 514	514	Coiled-coil domain-containing protein 11		PRO_0000089407
Regions
	Coiled coil	91 – 148	58	Potential
	Coiled coil	203 – 474	272	Potential
Natural variations
	Natural variant	231	1	R → C: dbSNP rs12607385.		VAR_050746
	Natural variant	294	1	E → K: dbSNP rs35193847. Ref.1		VAR_050747

Sequences

	Sequence		Length	Mass (Da)
	Q96M91-1 [UniParc]. Last modified November 28, 2006. Version 2. Checksum: 50D8D72F26D227E3	FASTA	514	61,835
	10 20 30 40 50 60 MYSQRFGTVQ REVKGPTPKV VIVRSKPPKG QGAEHHLERI RRSHQKHNAI LASIKSSERD 70 80 90 100 110 120 RLKAEWDQHN DCKILDSLVR ARIKDAVQGF IINIEERRNK LRELLALEEN EYFTEMQLKK 130 140 150 160 170 180 ETIEEKKDRM REKTKLLKEK NEKERQDFVA EKLDQQFRER CEELRVELLS IHQKKVCEER 190 200 210 220 230 240 KAQIAFNEEL SRQKLVEEQM FSKLWEEDRL AKEKREAQEA RRQKELMENT RLGLNAQITS 250 260 270 280 290 300 IKAQRQATQL LKEEEARLVE SNNAQIKHEN EQDMLKKQKA KQETRTILQK ALQERIEHIQ 310 320 330 340 350 360 QEYRDEQDLN MKLVQRALQD LQEEADKKKQ KREDMIREQK IYHKYLAQRR EEEKAQEKEF 370 380 390 400 410 420 DRILEEDKAK KLAEKDKELR LEKEARRQLV DEVMCTRKLQ VQEKLQREAK EQEERAMEQK 430 440 450 460 470 480 HINESLKELN CEEKENFARR QRLAQEYRKQ LQMQIAYQQQ SQEAEKEEKR REFEAGVAAN 490 500 510 KMCLDKVQEV LSTHQVLPQN IHPMRKACPS KLPP

References

[1]

"Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S. Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT LYS-294. Tissue: Testis.

[2]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Testis.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AK057305 mRNA. Translation: BAB71418.1. Different initiation. AK302114 mRNA. Translation: BAG63493.1. BC030606 mRNA. Translation: AAH30606.2.
IPI	IPI00065428.
RefSeq	NP_659457.2.
UniGene	Hs.658630
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	Q96M91. 2 interactions.
STRING	Q96M91.
Proteomic databases
PRIDE	Q96M91.
Genome annotation databases
Ensembl	ENST00000398545; ENSP00000381553; ENSG00000172361; Homo sapiens. [Genome view]
GeneID	220136.
KEGG	hsa:220136.
UCSC	uc002lee.1. human.
Organism-specific databases
CTD	220136.
GeneCards	GC18M046008.
HGNC	HGNC:26530. CCDC11.
PharmGKB	PA134960690.
GenAtlas	Search...
Phylogenomic databases
HOGENOM	Q96M91.
HOVERGEN	Q96M91.
OMA	QLQMQIA
OrthoDB	EOG9KM1PF
Gene expression databases
ArrayExpress	Q96M91.
Bgee	Q96M91.
CleanEx	HS_CCDC11.
Genevestigator	Q96M91.
GermOnline	ENSG00000172361. Homo sapiens.
Family and domain databases
ProtoNet	Search...
Other Resources
NextBio	91009.

Entry information

Entry name

CCD11_HUMAN

Accession

Primary (citable) accession number: Q96M91
Secondary accession number(s): B4DXT1

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 15, 2005
Last sequence update:	November 28, 2006
Last modified:	November 24, 2009
This is version 53 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HPI (Human Proteome Initiative)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.