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Reviewed, UniProtKB/Swiss-Prot Q96L91 (EP400_HUMAN)

Last modified June 16, 2009. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (5) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Web resources · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    E1A-binding protein p400
    EC=3.6.1.-
Alternative name(s):
    p400 kDa SWI2/SNF2-related protein
    Domino homolog
      Short name=hDomino
    CAG repeat protein 32
    Trinucleotide repeat-containing gene 12 protein
Gene names
Name: EP400
Synonyms: CAGH32, KIAA1498, KIAA1818, TNRC12
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length3160 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Function

Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. May be required for transcriptional activation of E2F1 and MYC target genes during cellular proliferation. The NuA4 complex ATPase and helicase activities seem to be, at least in part, contributed by the association of RUVBL1 and RUVBL2 with EP400. May regulate ZNF42 transcription activity.

Subunit structure

Component of the NuA4 histone acetyltransferase complex which contains the catalytic subunit HTATIP/TIP60 and the subunits EP400, TRRAP/PAF400, BRD8/SMAP, EPC1, DMAP1/DNMAP1, RUVBL1/TIP49, RUVBL2, ING3, actin, ACTL6A/BAF53A, MORF4L1/MRG15, MORF4L2/MRGX, MRGBP, YEATS4/GAS41, VPS72/YL1 and EAF6. May also participate in the formation of NuA4 related complexes which lack the HTATIP/TIP60 catalytic subunit, but which include the SWI/SNF related protein SRCAP. The NuA4 complex interacts with MYC and the adenovirus E1A protein. EP400 interacts with TRRAP, RUVBL1 and RUVBL2. Interacts with ZNF42 By similarity.

Subcellular location

Nucleus By similarity.

Tissue specificity

Ubiquitously expressed. Ref.1

Sequence similarities

Belongs to the SNF2/RAD54 helicase family. SWR1 subfamily.

Contains 1 helicase ATP-binding domain.

Contains 1 helicase C-terminal domain.

Contains 1 HSA domain.

Contains 1 Myb-like domain.

Sequence caution

The sequence AAB91441.1 differs from that shown. Reason: Frameshift at positions 2959 and 3020.

The sequence AAH37208.1 differs from that shown. Reason: Miscellaneous discrepancy. Intron retention.

The sequence AAH64554.1 differs from that shown. Reason: Miscellaneous discrepancy. Contaminating sequence. Potential poly-A sequence.

Ontologies

Keywords
   Cellular componentNucleus
   Coding sequence diversityAlternative splicing
Polymorphism
   LigandATP-binding
DNA-binding
Nucleotide-binding
   Molecular functionChromatin regulator
Helicase
Hydrolase
   PTMPhosphoprotein
Gene Ontology (GO)
   Biological processchromatin modification

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentNuA4 histone acetyltransferase complex Ref.10

Inferred from direct assay. Source: UniProtKB

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

DNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

helicase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Alternative products

This entry describes 4 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q96L91-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 (identifier: Q96L91-2)

The sequence of this isoform differs from the canonical sequence as follows:
     446-481: Missing.
Isoform 3 (identifier: Q96L91-3)

The sequence of this isoform differs from the canonical sequence as follows:
     446-481: Missing.
     482-482: Missing.
     515-550: Missing.
Note: No experimental confirmation available.
Isoform 4 (identifier: Q96L91-4)

The sequence of this isoform differs from the canonical sequence as follows:
     446-481: Missing.
     1519-1600: AAAAPFQTSQ...PSQAQARLPS → G
Note: No experimental confirmation available.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 31603160E1A-binding protein p400
PRO_0000074312

Regions

Domain799 – 87173HSA
Domain1103 – 1268166Helicase ATP-binding
Domain1899 – 2056158Helicase C-terminal
Domain2360 – 242970Myb-like
Nucleotide binding1116 – 11238ATP Potential
Region951 – 1365415Interactions with RUVBL1 and RUVBL2
Region2524 – 2789266Interaction with ZNF42 By similarity
Motif1219 – 12224DEAH box-like
Compositional bias278 – 2814Poly-Gln
Compositional bias316 – 3194Poly-Pro
Compositional bias426 – 43712Poly-Glu
Compositional bias1517 – 15226Poly-Ala
Compositional bias2543 – 255412Poly-Pro
Compositional bias2557 – 25648Poly-Pro
Compositional bias2756 – 278530Poly-Gln
Compositional bias2829 – 28357Poly-Pro

Amino acid modifications

Modified residue3141Phosphothreonine Ref.13
Modified residue3151Phosphoserine Ref.13
Modified residue3201Phosphothreonine Ref.13
Modified residue7361Phosphoserine Ref.11
Modified residue7551Phosphoserine By similarity
Modified residue9411Phosphoserine Ref.13
Modified residue9431Phosphoserine Ref.13
Modified residue9451Phosphothreonine Ref.13
Modified residue15471Phosphoserine Ref.12
Modified residue17281Phosphoserine Ref.13
Modified residue17321Phosphoserine Ref.13
Modified residue28141Phosphothreonine Ref.13

Natural variations

Alternative sequence446 – 48136Missing in isoform 2, isoform 3 and isoform 4.
VSP_011992
Alternative sequence4821Missing in isoform 3.
VSP_011993
Alternative sequence515 – 55036Missing in isoform 3.
VSP_011994
Alternative sequence1519 – 160082AAAAP…ARLPS → G in isoform 4.
VSP_011995
Natural variant13081T → I: dbSNP rs13377636.
VAR_046957

Experimental info

Sequence conflict5371D → G in AAH37208. Ref.5
Sequence conflict8101S → P in AAH37208. Ref.5
Sequence conflict15631S → F in AAK97789. Ref.1
Sequence conflict16421L → F AA sequence Ref.1
Sequence conflict16451L → F AA sequence Ref.1
Sequence conflict27561Missing in AC137590. Ref.2
Sequence conflict27561Missing in AC137632. Ref.2
Sequence conflict28451T → A in AAK97789. Ref.1
Sequence conflict28451T → A in AAB91441. Ref.7
Sequence conflict28981A → S in AAK97789. Ref.1
Sequence conflict28981A → S in AAB91441. Ref.7
Sequence conflict2913 – 29153ALA → PLP in AAK97789. Ref.1
Sequence conflict2913 – 29153ALA → PLP in AAB91441. Ref.7
Sequence conflict29911A → T in AAK97789. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified October 14, 2008. Version 3.
Checksum: 541EC3DC0B25FB80

FASTA3,160343,617
        10         20         30         40         50         60 
MHHGTGPQNV QHQLQRSRAC PGSEGEEQPA HPNPPPSPAA PFAPSASPSA PQSPSYQIQQ 

        70         80         90        100        110        120 
LMNRSPATGQ NVNITLQSVG PVVGGNQQIT LAPLPLPSPT SPGFQFSAQP RRFEHGSPSY 

       130        140        150        160        170        180 
IQVTSPLSQQ VQTQSPTQPS PGPGQALQNV RAGAPGPGLG LCSSSPTGGF VDASVLVRQI 

       190        200        210        220        230        240 
SLSPSSGGHF VFQDGSGLTQ IAQGAQVQLQ HPGTPITVRE RRPSQPHTQS GGTIHHLGPQ 

       250        260        270        280        290        300 
SPAAAGGAGL QPLASPSHIT TANLPPQISS IIQGQLVQQQ QVLQGPPLPR PLGFERTPGV 

       310        320        330        340        350        360 
LLPGAGGAAG FGMTSPPPPT SPSRTAVPPG LSSLPLTSVG NTGMKKVPKK LEEIPPASPE 

       370        380        390        400        410        420 
MAQMRKQCLD YHYQEMQALK EVFKEYLIEL FFLQHFQGNM MDFLAFKKKH YAPLQAYLRQ 

       430        440        450        460        470        480 
NDLDIEEEEE EEEEEEEKSE VINDEVKVVT GKDGQTGTPV AIATQLPPKV SAAFSSQQQP 

       490        500        510        520        530        540 
FQQALAGSLV AGAGSTVETD LFKRQQAMPS TGMAEQSKRP RLEVGHQGVV FQHPGADAGV 

       550        560        570        580        590        600 
PLQQLMPTAQ GGMPPTPQAA QLAGQRQSQQ QYDPSTGPPV QNAASLHTPL PQLPGRLPPA 

       610        620        630        640        650        660 
GVPTAALSSA LQFAQQPQVV EAQTQLQIPV KTQQPNVPIP APPSSQLPIP PSQPAQLALH 

       670        680        690        700        710        720 
VPTPGKVQVQ ASQLSSLPQM VASTRLPVDP APPCPRPLPT SSTSSLAPVS GSGPGPSPAR 

       730        740        750        760        770        780 
SSPVNRPSSA TNKALSPVTS RTPGVVASAP TKPQSPAQNA TSSQDSSQDT LTEQITLENQ 

       790        800        810        820        830        840 
VHQRIAELRK AGLWSQRRLP KLQEAPRPKS HWDYLLEEMQ WMATDFAQER RWKVAAAKKL 

       850        860        870        880        890        900 
VRTVVRHHEE KQLREERGKK EEQSRLRRIA ASTAREIECF WSNIEQVVEI KLRVELEEKR 

       910        920        930        940        950        960 
KKALNLQKVS RRGKELRPKG FDALQESSLD SGMSGRKRKA SISLTDDEVD DEEETIEEEE 

       970        980        990       1000       1010       1020 
ANEGVVDHQT ELSNLAKEAE LPLLDLMKLY EGAFLPSSQW PRPKPDGEDT SGEEDADDCP 

      1030       1040       1050       1060       1070       1080 
GDRESRKDLV LIDSLFIMDQ FKAAERMNIG KPNAKDIADV TAVAEAILPK GSARVTTSVK 

      1090       1100       1110       1120       1130       1140 
FNAPSLLYGA LRDYQKIGLD WLAKLYRKNL NGILADEAGL GKTVQIIAFF AHLACNEGNW 

      1150       1160       1170       1180       1190       1200 
GPHLVVVRSC NILKWELELK RWCPGLKILS YIGSHRELKA KRQEWAEPNS FHVCITSYTQ 

      1210       1220       1230       1240       1250       1260 
FFRGLTAFTR VRWKCLVIDE MQRVKGMTER HWEAVFTLQS QQRLLLIDSP LHNTFLELWT 

      1270       1280       1290       1300       1310       1320 
MVHFLVPGIS RPYLSSPLRA PSEESQDYYH KVVIRLHRVT QPFILRRTKR DVEKQLTKKY 

      1330       1340       1350       1360       1370       1380 
EHVLKCRLSN RQKALYEDVI LQPGTQEALK SGHFVNVLSI LVRLQRICNH PGLVEPRHPG 

      1390       1400       1410       1420       1430       1440 
SSYVAGPLEY PSASLILKAL ERDFWKEADL SMFDLIGLEN KITRHEAELL SKKKIPRKLM 

      1450       1460       1470       1480       1490       1500 
EEISTSAAPA ARPAAAKLKA SRLFQPVQYG QKPEGRTVAF PSTHPPRTAA PTTASAAPQG 

      1510       1520       1530       1540       1550       1560 
PLRGRPPIAT FSANPEAKAA AAPFQTSQAS ASAPRHQPAS ASSTAASPAH PAKLRAQTTA 

      1570       1580       1590       1600       1610       1620 
QASTPGQPPP QPQAPSHAAG QSALPQRLVL PSQAQARLPS GEVVKIAQLA SITGPQSRVA 

      1630       1640       1650       1660       1670       1680 
QPETPVTLQF QGSKFTLSHS QLRQLTAGQP LQLQGSVLQI VSAPGQPYLR APGPVVMQTV 

      1690       1700       1710       1720       1730       1740 
SQAGAVHGAL GSKPPAGGPS PAPLTPQVGV PGRVAVNALA VGEPGTASKP ASPIGGPTQE 

      1750       1760       1770       1780       1790       1800 
EKTRLLKERL DQIYLVNERR CSQAPVYGRD LLRICALPSH GRVQWRGSLD GRRGKEAGPA 

      1810       1820       1830       1840       1850       1860 
HSYTSSSESP SELMLTLCRC GESLQDVIDR VAFVIPPVVA APPSLRVPRP PPLYSHRMRI 

      1870       1880       1890       1900       1910       1920 
LRQGLREHAA PYFQQLRQTT APRLLQFPEL RLVQFDSGKL EALAILLQKL KSEGRRVLIL 

      1930       1940       1950       1960       1970       1980 
SQMILMLDIL EMFLNFHYLT YVRIDENASS EQRQELMRSF NRDRRIFCAI LSTHSRTTGI 

      1990       2000       2010       2020       2030       2040 
NLVEADTVVF YDNDLNPVMD AKAQEWCDRI GRCKDIHIYR LVSGNSIEEK LLKNGTKDLI 

      2050       2060       2070       2080       2090       2100 
REVAAQGNDY SMAFLTQRTI QELFEVYSPM DDAGFPVKAE EFVVLSQEPS VTETIAPKIA 

      2110       2120       2130       2140       2150       2160 
RPFIEALKSI EYLEEDAQKS AQEGVLGPHT DALSSDSENM PCDEEPSQLE ELADFMEQLT 

      2170       2180       2190       2200       2210       2220 
PIEKYALNYL ELFHTSIEQE KERNSEDAVM TAVRAWEFWN LKTLQEREAR LRLEQEEAEL 

      2230       2240       2250       2260       2270       2280 
LTYTREDAYS MEYVYEDVDG QTEVMPLWTP PTPPQDDSDI YLDSVMCLMY EATPIPEAKL 

      2290       2300       2310       2320       2330       2340 
PPVYVRKERK RHKTDPSAAG RKKKQRHGEA VVPPRSLFDR ATPGLLKIRR EGKEQKKNIL 

      2350       2360       2370       2380       2390       2400 
LKQQVPFAKP LPTFAKPTAE PGQDNPEWLI SEDWALLQAV KQLLELPLNL TIVSPAHTPN 

      2410       2420       2430       2440       2450       2460 
WDLVSDVVNS CSRIYRSSKQ CRNRYENVII PREEGKSKNN RPLRTSQIYA QDENATHTQL 

      2470       2480       2490       2500       2510       2520 
YTSHFDLMKM TAGKRSPPIK PLLGMNPFQK NPKHASVLAE SGINYDKPLP PIQVASLRAE 

      2530       2540       2550       2560       2570       2580 
RIAKEKKALA DQQKAQQPAV AQPPPPQPQP PPPPQQPPPP LPQPQAAGSQ PPAGPPAVQP 

      2590       2600       2610       2620       2630       2640 
QPQPQPQTQP QPVQAPAKAQ PAITTGGSAA VLAGTIKTSV TGTSMPTGAV SGNVIVNTIA 

      2650       2660       2670       2680       2690       2700 
GVPAATFQSI NKRLASPVAP GALTTPGGSA PAQVVHTQPP PRAVGSPATA TPDLVSMATT 

      2710       2720       2730       2740       2750       2760 
QGVRAVTSVT ASAVVTTNLT PVQTPARSLV PQVSQATGVQ LPGKTITPAH FQLLRQQQQQ 

      2770       2780       2790       2800       2810       2820 
QQQQQQQQQQ QQQQQQQQQQ QQQQQTTTTS QVQVPQIQGQ AQSPAQIKAV GKLTPEHLIK 

      2830       2840       2850       2860       2870       2880 
MQKQKLQMPP QPPPPQAQSA PPQPTAQVQV QTSQPPQQQS PQLTTVTAPR PGALLTGTTV 

      2890       2900       2910       2920       2930       2940 
ANLQVARLTR VPTSQLQAQG QMQTQAPQPA QVALAKPPVV SVPAAVVSSP GVTTLPMNVA 

      2950       2960       2970       2980       2990       3000 
GISVAIGQPQ KAAGQTVVAQ PVHMQQLLKL KQQAVQQQKA IQPQAAQGPA AVQQKITAQQ 

      3010       3020       3030       3040       3050       3060 
ITTPGAQQKV AYAAQPALKT QFLTTPISQA QKLAGAQQVQ TQIQVAKLPQ VVQQQTPVAS 

      3070       3080       3090       3100       3110       3120 
IQQVASASQQ ASPQTVALTQ ATAAGQQVQM IPAVTATAQV VQQKLIQQQV VTTASAPLQT 

      3130       3140       3150       3160 
PGAPNPAQVP ASSDSPSQQP KLQMRVPAVR LKTPTKPPCQ 

« Hide

Isoform 2.

Checksum: E094F8814F0785C8
Show »

FASTA3,124339,951
Isoform 3.

Checksum: 39D0F895EE08DBFF
Show »

FASTA3,087335,934
Isoform 4.

Checksum: 627DC4071EF8A035
Show »

FASTA3,043331,906

References

« Hide 'large scale' references
[1]"The p400 complex is an essential E1A transformation target."
Fuchs M., Gerber J., Drapkin R., Sif S., Ikura T., Ogryzko V., Lane W.S., Nakatani Y., Livingston D.M.
Cell 106:297-307(2001) [PubMed: 11509179] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), IDENTIFICATION BY MASS SPECTROMETRY, ROLE OF EP400-CONTAINING COMPLEXES IN CELLULAR TRANSFORMATION BY ADENOVIRUS E1A PROTEIN, TISSUE SPECIFICITY, INTERACTION WITH TRRAP; RUVBL1 AND RUVBL2.
[2]"The finished DNA sequence of human chromosome 12."
Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R. expand/collapse author list , Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Montgomery K.T., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.-Z., Steffen D., Lovering R.C., Wheeler D.A., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clerc-Blankenburg K.P., Davis C., Delgado O., Dinh H.H., Draper H., Gonzalez-Garay M.L., Havlak P., Jackson L.R., Jacob L.S., Kelly S.H., Li L., Li Z., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V., Okwuonu G.O., Pasternak S., Perez L.M., Plopper F.J.H., Santibanez J., Shen H., Tabor P.E., Verduzco D., Waldron L., Wang Q., Williams G.A., Zhang J., Zhou J., Allen C.C., Amin A.G., Anyalebechi V., Bailey M., Barbaria J.A., Bimage K.E., Bryant N.P., Burch P.E., Burkett C.E., Burrell K.L., Calderon E., Cardenas V., Carter K., Casias K., Cavazos I., Cavazos S.R., Ceasar H., Chacko J., Chan S.N., Chavez D., Christopoulos C., Chu J., Cockrell R., Cox C.D., Dang M., Dathorne S.R., David R., Davis C.M., Davy-Carroll L., Deshazo D.R., Donlin J.E., D'Souza L., Eaves K.A., Egan A., Emery-Cohen A.J., Escotto M., Flagg N., Forbes L.D., Gabisi A.M., Garza M., Hamilton C., Henderson N., Hernandez O., Hines S., Hogues M.E., Huang M., Idlebird D.G., Johnson R., Jolivet A., Jones S., Kagan R., King L.M., Leal B., Lebow H., Lee S., LeVan J.M., Lewis L.C., London P., Lorensuhewa L.M., Loulseged H., Lovett D.A., Lucier A., Lucier R.L., Ma J., Madu R.C., Mapua P., Martindale A.D., Martinez E., Massey E., Mawhiney S., Meador M.G., Mendez S., Mercado C., Mercado I.C., Merritt C.E., Miner Z.L., Minja E., Mitchell T., Mohabbat F., Mohabbat K., Montgomery B., Moore N., Morris S., Munidasa M., Ngo R.N., Nguyen N.B., Nickerson E., Nwaokelemeh O.O., Nwokenkwo S., Obregon M., Oguh M., Oragunye N., Oviedo R.J., Parish B.J., Parker D.N., Parrish J., Parks K.L., Paul H.A., Payton B.A., Perez A., Perrin W., Pickens A., Primus E.L., Pu L.-L., Puazo M., Quiles M.M., Quiroz J.B., Rabata D., Reeves K., Ruiz S.J., Shao H., Sisson I., Sonaike T., Sorelle R.P., Sutton A.E., Svatek A.F., Svetz L.A., Tamerisa K.S., Taylor T.R., Teague B., Thomas N., Thorn R.D., Trejos Z.Y., Trevino B.K., Ukegbu O.N., Urban J.B., Vasquez L.I., Vera V.A., Villasana D.M., Wang L., Ward-Moore S., Warren J.T., Wei X., White F., Williamson A.L., Wleczyk R., Wooden H.S., Wooden S.H., Yen J., Yoon L., Yoon V., Zorrilla S.E., Nelson D., Kucherlapati R., Weinstock G., Gibbs R.A.
Nature 440:346-351(2006) [PubMed: 16541075] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]"Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro."
Nagase T., Kikuno R., Ishikawa K., Hirosawa M., Ohara O.
DNA Res. 7:143-150(2000) [PubMed: 10819331] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-1847 (ISOFORM 4).
Tissue: Brain.
[4]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-897 (ISOFORM 3).
[5]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-978 (ISOFORM 1), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-895 (ISOFORM 3).
Tissue: Lymph and Testis.
[6]"Prediction of the coding sequences of unidentified human genes. XX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro."
Nagase T., Nakayama M., Nakajima D., Kikuno R., Ohara O.
DNA Res. 8:85-95(2001) [PubMed: 11347906] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2004-3160.
Tissue: Brain.
[7]"cDNAs with long CAG trinucleotide repeats from human brain."
Margolis R.L., Abraham M.R., Gatchell S.B., Li S.-H., Kidwai A.S., Breschel T.S., Stine O.C., Callahan C., McInnis M.G., Ross C.A.
Hum. Genet. 100:114-122(1997) [PubMed: 9225980] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 2463-3160.
Tissue: Brain.
[8]"Identification of new subunits of the multiprotein mammalian TRRAP/TIP60-containing histone acetyltransferase complex."
Cai Y., Jin J., Tomomori-Sato C., Sato S., Sorokina I., Parmely T.J., Conaway R.C., Conaway J.W.
J. Biol. Chem. 278:42733-42736(2003) [PubMed: 12963728] [Abstract]
Cited for: IDENTIFICATION IN NUA4 COMPLEX.
[9]"The highly conserved and multifunctional NuA4 HAT complex."
Doyon Y., Cote J.
Curr. Opin. Genet. Dev. 14:147-154(2004) [PubMed: 15196461] [Abstract]
Cited for: REVIEW ON NUA4 COMPLEX.
[10]"Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans."
Doyon Y., Selleck W., Lane W.S., Tan S., Cote J.
Mol. Cell. Biol. 24:1884-1896(2004) [PubMed: 14966270] [Abstract]
Cited for: FUNCTION, IDENTIFICATION BY MASS SPECTROMETRY, IDENTIFICATION IN NUA4 COMPLEX, IDENTIFICATION IN SRCAP-CONTAINING COMPLEX.
[11]"Large-scale characterization of HeLa cell nuclear phosphoproteins."
Beausoleil S.A., Jedrychowski M., Schwartz D., Elias J.E., Villen J., Li J., Cohn M.A., Cantley L.C., Gygi S.P.
Proc. Natl. Acad. Sci. U.S.A. 101:12130-12135(2004) [PubMed: 15302935] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-736, MASS SPECTROMETRY.
Tissue: Epithelium.
[12]"Improved titanium dioxide enrichment of phosphopeptides from HeLa cells and high confident phosphopeptide identification by cross-validation of MS/MS and MS/MS/MS spectra."
Yu L.-R., Zhu Z., Chan K.C., Issaq H.J., Dimitrov D.S., Veenstra T.D.
J. Proteome Res. 6:4150-4162(2007) [PubMed: 17924679] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1547, MASS SPECTROMETRY.
Tissue: Epithelium.
[13]"A quantitative atlas of mitotic phosphorylation."
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P.
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-314; SER-315; THR-320; SER-941; SER-943; THR-945; SER-1728; SER-1732 AND THR-2814, MASS SPECTROMETRY.
+Additional computationally mapped references.

Cross-references

Sequence databases

AY044869 mRNA. Translation: AAK97789.1.
AC137590 Genomic DNA. No translation available.
AC137632 Genomic DNA. No translation available.
AB040931 mRNA. Translation: BAA96022.1. Different initiation.
AK096311 mRNA. Translation: BAC04759.1.
BC037208 mRNA. Translation: AAH37208.1. Sequence problems.
BC064554 mRNA. Translation: AAH64554.1. Sequence problems.
AB058721 mRNA. Translation: BAB47447.1.
U80743 mRNA. Translation: AAB91441.1. Frameshift.
IPIIPI00064931.
IPI00167535.
IPI00783692.
IPI00798339.
RefSeqNP_056224.2.
UniGeneHs.699245

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ96L91. 5 interactions.

PTM databases

PhosphoSiteQ96L91.

Proteomic databases

PRIDEQ96L91.

Genome annotation databases

EnsemblENSG00000183495. Homo sapiens. [Contig view]
GeneID57634.
KEGGhsa:57634.

Organism-specific databases

GeneCardsGC12P131000.
H-InvDBHIX0021564.
HIX0023235.
HGNCHGNC:11958. EP400.
HPAHPA016704.
MIM606265. gene.
PharmGKBPA27808.
HUGESearch...
Search...
GenAtlasSearch...

Phylogenomic databases

HOVERGENQ96L91.

Gene expression databases

ArrayExpressQ96L91.
BgeeQ96L91.
CleanExHS_EP400.
GermOnlineENSG00000183495. Homo sapiens.

Family and domain databases

InterProIPR014001. DEAD-like_N.
IPR001650. DNA/RNA_helicase_C.
IPR002464. DNA/RNA_helicase_DEAH_CS.
IPR013999. HAS_subgroup.
IPR014012. Helicase/SANT-assoc_DNA_bd.
IPR014021. Helicase_SF1/SF2_ATP-bd.
IPR006562. HSA.
IPR017877. MYB-like.
IPR001005. SANT_DNA-bd.
IPR000330. SNF2_N.
[Graphical view]
PfamPF00271. Helicase_C. 1 hit.
PF07529. HSA. 1 hit.
PF00176. SNF2_N. 1 hit.
[Graphical view]
SMARTSM00487. DEXDc. 1 hit.
SM00573. HSA. 1 hit.
SM00717. SANT. 1 hit.
[Graphical view]
PROSITEPS00690. DEAH_ATP_HELICASE. False negative.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51204. HSA. 1 hit.
PS50090. MYB_LIKE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio64345.
SOURCESearch...

Entry information

Entry nameEP400_HUMAN
AccessionPrimary (citable) accession number: Q96L91
Secondary accession number(s): O15411 expand/collapse secondary AC list , Q6P2F5, Q8N8Q7, Q8NE05, Q96JK7, Q9P230
Entry history
Integrated into UniProtKB/Swiss-Prot: November 23, 2004
Last sequence update: October 14, 2008
Last modified: June 16, 2009
This is version 80 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

Relevant documents

Human chromosome 12

Human chromosome 12: entries, gene names and cross-references to MIM

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Web resources · Cross-references · Entry information · Relevant documents