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Q96L21

- RL10L_HUMAN

UniProt

Q96L21 - RL10L_HUMAN

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Protein

60S ribosomal protein L10-like

Gene
RPL10L
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

May play a role in compensating for the inactivated X-linked gene during spermatogenesis.1 Publication

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. spermatogenesis Source: UniProtKB
  2. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L10-like
Gene namesi
Name:RPL10L
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 14

Organism-specific databases

HGNCiHGNC:17976. RPL10L.

Subcellular locationi

GO - Cellular componenti

  1. cytosolic large ribosomal subunit Source: UniProtKB
  2. nucleus Source: LIFEdb
Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA34662.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 21421460S ribosomal protein L10-likePRO_0000147106Add
BLAST

Proteomic databases

PaxDbiQ96L21.
PeptideAtlasiQ96L21.
PRIDEiQ96L21.

PTM databases

PhosphoSiteiQ96L21.

Expressioni

Tissue specificityi

Testis specific.1 Publication

Gene expression databases

BgeeiQ96L21.
CleanExiHS_RPL10L.
GenevestigatoriQ96L21.

Organism-specific databases

HPAiHPA011311.

Interactioni

Protein-protein interaction databases

BioGridi126711. 75 interactions.
IntActiQ96L21. 3 interactions.
MINTiMINT-1140193.
STRINGi9606.ENSP00000298283.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3J3Belectron microscopy5.00I1-214[»]
ProteinModelPortaliQ96L21.
SMRiQ96L21. Positions 2-214.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0197.
HOGENOMiHOG000223754.
HOVERGENiHBG002287.
InParanoidiQ96L21.
KOiK02866.
OMAiMVAKKCL.
OrthoDBiEOG76MK97.
PhylomeDBiQ96L21.
TreeFamiTF300082.

Family and domain databases

Gene3Di3.90.1170.10. 1 hit.
InterProiIPR001197. Ribosomal_L10e.
IPR016180. Ribosomal_L10e/L16.
IPR018255. Ribosomal_L10e_CS.
[Graphical view]
PfamiPF00252. Ribosomal_L16. 1 hit.
[Graphical view]
PIRSFiPIRSF005590. Ribosomal_L10. 1 hit.
SUPFAMiSSF54686. SSF54686. 1 hit.
TIGRFAMsiTIGR00279. L10e. 1 hit.
PROSITEiPS01257. RIBOSOMAL_L10E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q96L21-1 [UniParc]FASTAAdd to Basket

« Hide

MGRRPARCYR YCKNKPYPKS RFCRGVPDAK IRIFDLGRKK AKVDEFPLGG    50
HMVSDEYEQL SSEALEAARI CANKYMVKSC GRDGFHMRVR LHPFHVIRIN 100
KMLSCAGADR LQTGMRGAFG KPQGTVARVH IGQVIMSIRT KLQNEEHVIE 150
ALRRAKFKFP GRQKIHISKK WGFTKFNADE FEDMVAKKCL IPDGCGVKYV 200
PSHGPLDKWR VLHS 214
Length:214
Mass (Da):24,519
Last modified:January 23, 2007 - v3
Checksum:i9119E2F8C40C2E37
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB063605 Genomic DNA. Translation: BAC19833.1.
AB063608 mRNA. Translation: BAC19835.1.
BC014310 mRNA. Translation: AAH14310.1.
BC066312 mRNA. Translation: AAH66312.1.
CCDSiCCDS32071.1.
RefSeqiNP_542784.1. NM_080746.2.
UniGeneiHs.308332.

Genome annotation databases

EnsembliENST00000298283; ENSP00000298283; ENSG00000165496.
GeneIDi140801.
KEGGihsa:140801.
UCSCiuc001wwg.3. human.

Polymorphism databases

DMDMi57013008.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB063605 Genomic DNA. Translation: BAC19833.1 .
AB063608 mRNA. Translation: BAC19835.1 .
BC014310 mRNA. Translation: AAH14310.1 .
BC066312 mRNA. Translation: AAH66312.1 .
CCDSi CCDS32071.1.
RefSeqi NP_542784.1. NM_080746.2.
UniGenei Hs.308332.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3J3B electron microscopy 5.00 I 1-214 [» ]
ProteinModelPortali Q96L21.
SMRi Q96L21. Positions 2-214.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 126711. 75 interactions.
IntActi Q96L21. 3 interactions.
MINTi MINT-1140193.
STRINGi 9606.ENSP00000298283.

PTM databases

PhosphoSitei Q96L21.

Polymorphism databases

DMDMi 57013008.

Proteomic databases

PaxDbi Q96L21.
PeptideAtlasi Q96L21.
PRIDEi Q96L21.

Protocols and materials databases

DNASUi 140801.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000298283 ; ENSP00000298283 ; ENSG00000165496 .
GeneIDi 140801.
KEGGi hsa:140801.
UCSCi uc001wwg.3. human.

Organism-specific databases

CTDi 140801.
GeneCardsi GC14M047120.
HGNCi HGNC:17976. RPL10L.
HPAi HPA011311.
neXtProti NX_Q96L21.
PharmGKBi PA34662.
GenAtlasi Search...

Phylogenomic databases

eggNOGi COG0197.
HOGENOMi HOG000223754.
HOVERGENi HBG002287.
InParanoidi Q96L21.
KOi K02866.
OMAi MVAKKCL.
OrthoDBi EOG76MK97.
PhylomeDBi Q96L21.
TreeFami TF300082.

Miscellaneous databases

GeneWikii RPL10L.
GenomeRNAii 140801.
NextBioi 84401.
PROi Q96L21.

Gene expression databases

Bgeei Q96L21.
CleanExi HS_RPL10L.
Genevestigatori Q96L21.

Family and domain databases

Gene3Di 3.90.1170.10. 1 hit.
InterProi IPR001197. Ribosomal_L10e.
IPR016180. Ribosomal_L10e/L16.
IPR018255. Ribosomal_L10e_CS.
[Graphical view ]
Pfami PF00252. Ribosomal_L16. 1 hit.
[Graphical view ]
PIRSFi PIRSF005590. Ribosomal_L10. 1 hit.
SUPFAMi SSF54686. SSF54686. 1 hit.
TIGRFAMsi TIGR00279. L10e. 1 hit.
PROSITEi PS01257. RIBOSOMAL_L10E. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Functional second genes generated by retrotransposition of the X-linked ribosomal protein genes."
    Uechi T., Maeda N., Tanaka T., Kenmochi N.
    Nucleic Acids Res. 30:5369-5375(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.
  3. Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.0 ANGSTROMS) OF 80S RIBOSOME.

Entry informationi

Entry nameiRL10L_HUMAN
AccessioniPrimary (citable) accession number: Q96L21
Secondary accession number(s): Q8IUD1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 4, 2005
Last sequence update: January 23, 2007
Last modified: July 9, 2014
This is version 101 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Miscellaneous

This gene has no introns in its coding regions, and therefore was most likely produced by retrotransposition of the original X-linked gene during evolution.

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Human chromosome 14
    Human chromosome 14: entries, gene names and cross-references to MIM
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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