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Q96JQ0

- PCD16_HUMAN

UniProt

Q96JQ0 - PCD16_HUMAN

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Protein

Protocadherin-16

Gene

DCHS1

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli

Functioni

Calcium-dependent cell-adhesion protein. Mediates functions in neuroprogenitor cell proliferation and differentiation.

GO - Molecular functioni

  1. calcium ion binding Source: InterPro

GO - Biological processi

  1. branching involved in ureteric bud morphogenesis Source: Ensembl
  2. calcium-dependent cell-cell adhesion Source: UniProtKB
  3. cochlea development Source: Ensembl
  4. digestive tract development Source: Ensembl
  5. heart morphogenesis Source: Ensembl
  6. heterophilic cell-cell adhesion Source: UniProtKB
  7. hippo signaling Source: UniProtKB
  8. homophilic cell adhesion Source: InterPro
  9. neural tube development Source: Ensembl
  10. neurogenesis Source: UniProtKB
  11. ossification involved in bone maturation Source: Ensembl
  12. post-anal tail morphogenesis Source: Ensembl
Complete GO annotation...

Keywords - Biological processi

Cell adhesion

Keywords - Ligandi

Calcium

Names & Taxonomyi

Protein namesi
Recommended name:
Protocadherin-16
Alternative name(s):
Cadherin-19
Cadherin-25
Fibroblast cadherin-1
Protein dachsous homolog 1
Gene namesi
Name:DCHS1
Synonyms:CDH19, CDH25, FIB1, KIAA1773, PCDH16
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 11

Organism-specific databases

HGNCiHGNC:13681. DCHS1.

Subcellular locationi

Cell membrane By similarity; Single-pass type I membrane protein By similarity
Note: In the embryonic cortex, FAT4 and DCHS1 accumulated at the cell-cell boundaries located apical to the adherens junction.By similarity

GO - Cellular componenti

  1. apical part of cell Source: Ensembl
  2. integral component of membrane Source: UniProtKB-KW
  3. membrane Source: UniProtKB
  4. plasma membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

Pathology & Biotechi

Involvement in diseasei

Van Maldergem syndrome 1 (VMLDS1) [MIM:601390]: An autosomal recessive disorder characterized by intellectual disability, typical craniofacial features, auditory malformations resulting in hearing loss, and skeletal and limb malformations. Some patients have renal hypoplasia. Brain MRI typically shows periventricular nodular heterotopia.1 Publication
Note: The disease is caused by mutations affecting the gene represented in this entry.
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti2370 – 23701N → I in VMLDS1. 1 Publication
VAR_070928

Keywords - Diseasei

Deafness, Disease mutation, Mental retardation

Organism-specific databases

MIMi601390. phenotype.
Orphaneti314679. Cerebro-facio-articular syndrome.
PharmGKBiPA33000.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4242Sequence AnalysisAdd
BLAST
Chaini43 – 32983256Protocadherin-16PRO_0000004000Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi217 – 2171N-linked (GlcNAc...)Sequence Analysis
Glycosylationi256 – 2561N-linked (GlcNAc...)Sequence Analysis
Glycosylationi402 – 4021N-linked (GlcNAc...)Sequence Analysis
Glycosylationi584 – 5841N-linked (GlcNAc...)Sequence Analysis
Glycosylationi1249 – 12491N-linked (GlcNAc...)Sequence Analysis
Glycosylationi1521 – 15211N-linked (GlcNAc...)Sequence Analysis
Glycosylationi1718 – 17181N-linked (GlcNAc...)Sequence Analysis
Glycosylationi1996 – 19961N-linked (GlcNAc...)Sequence Analysis
Glycosylationi2361 – 23611N-linked (GlcNAc...)Sequence Analysis
Glycosylationi2428 – 24281N-linked (GlcNAc...)Sequence Analysis
Glycosylationi2569 – 25691N-linked (GlcNAc...)Sequence Analysis
Glycosylationi2761 – 27611N-linked (GlcNAc...)Sequence Analysis
Glycosylationi2792 – 27921N-linked (GlcNAc...)Sequence Analysis
Glycosylationi2862 – 28621N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ96JQ0.
PRIDEiQ96JQ0.

PTM databases

PhosphoSiteiQ96JQ0.

Expressioni

Tissue specificityi

Expressed in fibroblasts but not in melanocytes or keratinocytes.1 Publication

Gene expression databases

BgeeiQ96JQ0.
CleanExiHS_CDH19.
HS_DCHS1.
GenevestigatoriQ96JQ0.

Organism-specific databases

HPAiHPA017970.
HPA050246.

Interactioni

Subunit structurei

Heterophilic interaction with FAT4; this interaction affects their respective protein levels.By similarity

Protein-protein interaction databases

BioGridi114194. 2 interactions.
IntActiQ96JQ0. 2 interactions.
STRINGi9606.ENSP00000299441.

Structurei

3D structure databases

ProteinModelPortaliQ96JQ0.
SMRiQ96JQ0. Positions 56-2923.
ModBaseiSearch...
MobiDBiSearch...

Topological domain

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini43 – 29402898ExtracellularSequence AnalysisAdd
BLAST
Topological domaini2962 – 3298337CytoplasmicSequence AnalysisAdd
BLAST

Transmembrane

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei2941 – 296121HelicalSequence AnalysisAdd
BLAST

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini43 – 143101Cadherin 1PROSITE-ProRule annotationAdd
BLAST
Domaini144 – 255112Cadherin 2PROSITE-ProRule annotationAdd
BLAST
Domaini256 – 362107Cadherin 3PROSITE-ProRule annotationAdd
BLAST
Domaini367 – 472106Cadherin 4PROSITE-ProRule annotationAdd
BLAST
Domaini474 – 578105Cadherin 5PROSITE-ProRule annotationAdd
BLAST
Domaini579 – 685107Cadherin 6PROSITE-ProRule annotationAdd
BLAST
Domaini686 – 790105Cadherin 7PROSITE-ProRule annotationAdd
BLAST
Domaini791 – 894104Cadherin 8PROSITE-ProRule annotationAdd
BLAST
Domaini895 – 1000106Cadherin 9PROSITE-ProRule annotationAdd
BLAST
Domaini1001 – 1111111Cadherin 10PROSITE-ProRule annotationAdd
BLAST
Domaini1112 – 1211100Cadherin 11PROSITE-ProRule annotationAdd
BLAST
Domaini1218 – 1324107Cadherin 12PROSITE-ProRule annotationAdd
BLAST
Domaini1333 – 1436104Cadherin 13PROSITE-ProRule annotationAdd
BLAST
Domaini1437 – 1546110Cadherin 14PROSITE-ProRule annotationAdd
BLAST
Domaini1547 – 1649103Cadherin 15PROSITE-ProRule annotationAdd
BLAST
Domaini1650 – 1751102Cadherin 16PROSITE-ProRule annotationAdd
BLAST
Domaini1752 – 1855104Cadherin 17PROSITE-ProRule annotationAdd
BLAST
Domaini1856 – 1960105Cadherin 18PROSITE-ProRule annotationAdd
BLAST
Domaini1965 – 2068104Cadherin 19PROSITE-ProRule annotationAdd
BLAST
Domaini2069 – 2171103Cadherin 20PROSITE-ProRule annotationAdd
BLAST
Domaini2172 – 2277106Cadherin 21PROSITE-ProRule annotationAdd
BLAST
Domaini2278 – 237699Cadherin 22PROSITE-ProRule annotationAdd
BLAST
Domaini2377 – 2482106Cadherin 23PROSITE-ProRule annotationAdd
BLAST
Domaini2483 – 2602120Cadherin 24PROSITE-ProRule annotationAdd
BLAST
Domaini2603 – 2706104Cadherin 25PROSITE-ProRule annotationAdd
BLAST
Domaini2707 – 2813107Cadherin 26PROSITE-ProRule annotationAdd
BLAST
Domaini2814 – 2933120Cadherin 27PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 27 cadherin domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG12793.
GeneTreeiENSGT00760000118805.
HOGENOMiHOG000115466.
HOVERGENiHBG053522.
InParanoidiQ96JQ0.
KOiK16507.
OMAiLYQVMLL.
OrthoDBiEOG75TM9Z.
PhylomeDBiQ96JQ0.
TreeFamiTF316403.

Family and domain databases

Gene3Di2.60.40.60. 27 hits.
InterProiIPR002126. Cadherin.
IPR015919. Cadherin-like.
IPR020894. Cadherin_CS.
[Graphical view]
PfamiPF00028. Cadherin. 23 hits.
[Graphical view]
PRINTSiPR00205. CADHERIN.
SMARTiSM00112. CA. 27 hits.
[Graphical view]
SUPFAMiSSF49313. SSF49313. 27 hits.
PROSITEiPS00232. CADHERIN_1. 18 hits.
PS50268. CADHERIN_2. 27 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q96JQ0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQKELGIVPS CPGMKSPRPH LLLPLLLLLL LLLGAGVPGA WGQAGSLDLQ
60 70 80 90 100
IDEEQPAGTL IGDISAGLPA GTAAPLMYFI SAQEGSGVGT DLAIDEHSGV
110 120 130 140 150
VRTARVLDRE QRDRYRFTAV TPDGATVEVT VRVADINDHA PAFPQARAAL
160 170 180 190 200
QVPEHTAFGT RYPLEPARDA DAGRLGTQGY ALSGDGAGET FRLETRPGPD
210 220 230 240 250
GTPVPELVVT GELDRENRSH YMLQLEAYDG GSPPRRAQAL LDVTLLDIND
260 270 280 290 300
HAPAFNQSRY HAVVSESLAP GSPVLQVFAS DADAGVNGAV TYEINRRQSE
310 320 330 340 350
GDGPFSIDAH TGLLQLERPL DFEQRRVHEL VVQARDGGAH PELGSAFVTV
360 370 380 390 400
HVRDANDNQP SMTVIFLSAD GSPQVSEAAP PGQLVARISV SDPDDGDFAH
410 420 430 440 450
VNVSLEGGEG HFALSTQDSV IYLVCVARRL DREERDAYNL RVTATDSGSP
460 470 480 490 500
PLRAEAAFVL HVTDVNDNAP AFDRQLYRPE PLPEVALPGS FVVRVTARDP
510 520 530 540 550
DQGTNGQVTY SLAPGAHTHW FSIDPTSGII TTAASLDYEL EPQPQLIVVA
560 570 580 590 600
TDGGLPPLAS SATVSVALQD VNDNEPQFQR TFYNASLPEG TQPGTCFLQV
610 620 630 640 650
TATDADSGPF GLLSYSLGAG LGSSGSPPFR IDAHSGDVCT TRTLDRDQGP
660 670 680 690 700
SSFDFTVTAV DGGGLKSMVY VKVFLSDEND NPPQFYPREY AASISAQSPP
710 720 730 740 750
GTAVLRLRAH DPDQGSHGRL SYHILAGNSP PLFTLDEQSG LLTVAWPLAR
760 770 780 790 800
RANSVVQLEI GAEDGGGLQA EPSARVDISI VPGTPTPPIF EQLQYVFSVP
810 820 830 840 850
EDVAPGTSVG IVQAHNPPGR LAPVTLSLSG GDPRGLFSLD AVSGLLQTLR
860 870 880 890 900
PLDRELLGPV LELEVRAGSG VPPAFAVARV RVLLDDVNDN SPAFPAPEDT
910 920 930 940 950
VLLPPNTAPG TPIYTLRALD PDSGVNSRVT FTLLAGGGGA FTVDPTTGHV
960 970 980 990 1000
RLMRPLGPSG GPAHELELEA RDGGSPPRTS HFRLRVVVQD VGTRGLAPRF
1010 1020 1030 1040 1050
NSPTYRVDLP SGTTAGTQVL QVQAQAPDGG PITYHLAAEG ASSPFGLEPQ
1060 1070 1080 1090 1100
SGWLWVRAAL DREAQELYIL KVMAVSGSKA ELGQQTGTAT VRVSILNQNE
1110 1120 1130 1140 1150
HSPRLSEDPT FLAVAENQPP GTSVGRVFAT DRDSGPNGRL TYSLQQLSED
1160 1170 1180 1190 1200
SKAFRIHPQT GEVTTLQTLD REQQSSYQLL VQVQDGGSPP RSTTGTVHVA
1210 1220 1230 1240 1250
VLDLNDNSPT FLQASGAAGG GLPIQVPDRV PPGTLVTTLQ AKDPDEGENG
1260 1270 1280 1290 1300
TILYTLTGPG SELFSLHPHS GELLTAAPLI RAERPHYVLT LSAHDQGSPP
1310 1320 1330 1340 1350
RSASLQLLVQ VLPSARLAEP PPDLAERDPA APVPVVLTVT AAEGLRPGSL
1360 1370 1380 1390 1400
LGSVAAPEPA GVGALTYTLV GGADPEGTFA LDAASGRLYL ARPLDFEAGP
1410 1420 1430 1440 1450
PWRALTVRAE GPGGAGARLL RVQVQVQDEN EHAPAFARDP LALALPENPE
1460 1470 1480 1490 1500
PGAALYTFRA SDADGPGPNS DVRYRLLRQE PPVPALRLDA RTGALSAPRG
1510 1520 1530 1540 1550
LDRETTPALL LLVEATDRPA NASRRRAARV SARVFVTDEN DNAPVFASPS
1560 1570 1580 1590 1600
RVRLPEDQPP GPAALHVVAR DPDLGEAARV SYRLASGGDG HFRLHSSTGA
1610 1620 1630 1640 1650
LSVVRPLDRE QRAEHVLTVV ASDHGSPPRS ATQVLTVSVA DVNDEAPTFQ
1660 1670 1680 1690 1700
QQEYSVLLRE NNPPGTSLLT LRATDPDVGA NGQVTYGGVS SESFSLDPDT
1710 1720 1730 1740 1750
GVLTTLRALD REEQEEINLT VYAQDRGSPP QLTHVTVRVA VEDENDHAPT
1760 1770 1780 1790 1800
FGSAHLSLEV PEGQDPQTLT MLRASDPDVG ANGQLQYRIL DGDPSGAFVL
1810 1820 1830 1840 1850
DLASGEFGTM RPLDREVEPA FQLRIEARDG GQPALSATLL LTVTVLDAND
1860 1870 1880 1890 1900
HAPAFPVPAY SVEVPEDVPA GTLLLQLQAH DPDAGANGHV TYYLGAGTAG
1910 1920 1930 1940 1950
AFLLEPSSGE LRTAAALDRE QCPSYTFSVS AVDGAAAGPL STTVSVTITV
1960 1970 1980 1990 2000
RDVNDHAPTF PTSPLRLRLP RPGPSFSTPT LALATLRAED RDAGANASIL
2010 2020 2030 2040 2050
YRLAGTPPPG TTVDSYTGEI RVARSPVALG PRDRVLFIVA TDLGRPARSA
2060 2070 2080 2090 2100
TGVIIVGLQG EAERGPRFPR ASSEATIREN APPGTPIVSP RAVHAGGTNG
2110 2120 2130 2140 2150
PITYSILSGN EKGTFSIQPS TGAITVRSAE GLDFEVSPRL RLVLQAESGG
2160 2170 2180 2190 2200
AFAFTVLTLT LQDANDNAPR FLRPHYVAFL PESRPLEGPL LQVEADDLDQ
2210 2220 2230 2240 2250
GSGGQISYSL AASQPARGLF HVDPTTGTIT TTAILDREIW AETRLVLMAT
2260 2270 2280 2290 2300
DRGSPALVGS ATLTVMVIDT NDNRPTIPQP WELRVSEDAL LGSEIAQVTG
2310 2320 2330 2340 2350
NDVDSGPVLW YVLSPSGPQD PFSVGRYGGR VSLTGPLDFE QCDRYQLQLL
2360 2370 2380 2390 2400
AHDGPHEGRA NLTVLVEDVN DNAPAFSQSL YQVMLLEHTP PGSAILSVSA
2410 2420 2430 2440 2450
TDRDSGANGH ISYHLASPAD GFSVDPNNGT LFTIVGTVAL GHDGSGAVDV
2460 2470 2480 2490 2500
VLEARDHGAP GRAARATVHV QLQDQNDHAP SFTLSHYRVA VTEDLPPGST
2510 2520 2530 2540 2550
LLTLEATDAD GSRSHAAVDY SIISGNWGRV FQLEPRLAEA GESAGPGPRA
2560 2570 2580 2590 2600
LGCLVLLEPL DFESLTQYNL TVAAADRGQP PQSSVVPVTV TVLDVNDNPP
2610 2620 2630 2640 2650
VFTRASYRVT VPEDTPVGAE LLHVEASDAD PGPHGLVRFT VSSGDPSGLF
2660 2670 2680 2690 2700
ELDESSGTLR LAHALDCETQ ARHQLVVQAA DPAGAHFALA PVTIEVQDVN
2710 2720 2730 2740 2750
DHGPAFPLNL LSTSVAENQP PGTLVTTLHA IDGDAGAFGR LRYSLLEAGP
2760 2770 2780 2790 2800
GPEGREAFAL NSSTGELRAR VPFDYEHTES FRLLVGAADA GNLSASVTVS
2810 2820 2830 2840 2850
VLVTGEDEYD PVFLAPAFHF QVPEGARRGH SLGHVQATDE DGGADGLVLY
2860 2870 2880 2890 2900
SLATSSPYFG INQTTGALYL RVDSRAPGSG TATSGGGGRT RREAPRELRL
2910 2920 2930 2940 2950
EVIARGPLPG SRSATVPVTV DITHTALGLA PDLNLLLVGA VAASLGVVVV
2960 2970 2980 2990 3000
LALAALVLGL VRARSRKAEA APGPMSQAAP LASDSLQKLG REPPSPPPSE
3010 3020 3030 3040 3050
HLYHQTLPSY GGPGAGGPYP RGGSLDPSHS SGRGSAEAAE DDEIRMINEF
3060 3070 3080 3090 3100
PRVASVASSL AARGPDSGIQ QDADGLSDTS CEPPAPDTWY KGRKAGLLLP
3110 3120 3130 3140 3150
GAGATLYREE GPPATATAFL GGCGLSPAPT GDYGFPADGK PCVAGALTAI
3160 3170 3180 3190 3200
VAGEEELRGS YNWDYLLSWC PQFQPLASVF TEIARLKDEA RPCPPAPRID
3210 3220 3230 3240 3250
PPPLITAVAH PGAKSVPPKP ANTAAARAIF PPASHRSPIS HEGSLSSAAM
3260 3270 3280 3290
SPSFSPSLSP LAARSPVVSP FGVAQGPSAS ALSAESGLEP PDDTELHI
Length:3,298
Mass (Da):346,181
Last modified:December 1, 2001 - v1
Checksum:i6EE8D28BEF0795DB
GO

Sequence cautioni

The sequence BAB61903.2 differs from that shown. Reason: Erroneous initiation.

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti1583 – 15831R → W in a colorectal cancer sample; somatic mutation. 1 Publication
VAR_036110
Natural varianti1949 – 19491T → M.
Corresponds to variant rs4758443 [ dbSNP | Ensembl ].
VAR_048577
Natural varianti2172 – 21721L → Q.
Corresponds to variant rs56920123 [ dbSNP | Ensembl ].
VAR_061074
Natural varianti2331 – 23311V → I.
Corresponds to variant rs7924553 [ dbSNP | Ensembl ].
VAR_048578
Natural varianti2359 – 23591R → C.
Corresponds to variant rs2659875 [ dbSNP | Ensembl ].
VAR_048579
Natural varianti2370 – 23701N → I in VMLDS1. 1 Publication
VAR_070928

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB053446 mRNA. Translation: BAB61903.2. Different initiation.
AB000895 mRNA. Translation: BAA21133.1.
CCDSiCCDS7771.1.
PIRiPC4297.
RefSeqiNP_003728.1. NM_003737.3.
UniGeneiHs.199850.

Genome annotation databases

EnsembliENST00000299441; ENSP00000299441; ENSG00000166341.
GeneIDi8642.
KEGGihsa:8642.
UCSCiuc001mem.1. human.

Polymorphism databases

DMDMi20139065.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB053446 mRNA. Translation: BAB61903.2 . Different initiation.
AB000895 mRNA. Translation: BAA21133.1 .
CCDSi CCDS7771.1.
PIRi PC4297.
RefSeqi NP_003728.1. NM_003737.3.
UniGenei Hs.199850.

3D structure databases

ProteinModelPortali Q96JQ0.
SMRi Q96JQ0. Positions 56-2923.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 114194. 2 interactions.
IntActi Q96JQ0. 2 interactions.
STRINGi 9606.ENSP00000299441.

PTM databases

PhosphoSitei Q96JQ0.

Polymorphism databases

DMDMi 20139065.

Proteomic databases

PaxDbi Q96JQ0.
PRIDEi Q96JQ0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000299441 ; ENSP00000299441 ; ENSG00000166341 .
GeneIDi 8642.
KEGGi hsa:8642.
UCSCi uc001mem.1. human.

Organism-specific databases

CTDi 8642.
GeneCardsi GC11M006642.
HGNCi HGNC:13681. DCHS1.
HPAi HPA017970.
HPA050246.
MIMi 601390. phenotype.
603057. gene.
neXtProti NX_Q96JQ0.
Orphaneti 314679. Cerebro-facio-articular syndrome.
PharmGKBi PA33000.
HUGEi Search...
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG12793.
GeneTreei ENSGT00760000118805.
HOGENOMi HOG000115466.
HOVERGENi HBG053522.
InParanoidi Q96JQ0.
KOi K16507.
OMAi LYQVMLL.
OrthoDBi EOG75TM9Z.
PhylomeDBi Q96JQ0.
TreeFami TF316403.

Miscellaneous databases

GeneWikii DCHS1.
GenomeRNAii 8642.
NextBioi 32399.
PROi Q96JQ0.
SOURCEi Search...

Gene expression databases

Bgeei Q96JQ0.
CleanExi HS_CDH19.
HS_DCHS1.
Genevestigatori Q96JQ0.

Family and domain databases

Gene3Di 2.60.40.60. 27 hits.
InterProi IPR002126. Cadherin.
IPR015919. Cadherin-like.
IPR020894. Cadherin_CS.
[Graphical view ]
Pfami PF00028. Cadherin. 23 hits.
[Graphical view ]
PRINTSi PR00205. CADHERIN.
SMARTi SM00112. CA. 27 hits.
[Graphical view ]
SUPFAMi SSF49313. SSF49313. 27 hits.
PROSITEi PS00232. CADHERIN_1. 18 hits.
PS50268. CADHERIN_2. 27 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Identification of three novel non-classical cadherin genes through comprehensive analysis of large cDNAs."
    Nakajima D., Nakayama M., Kikuno R., Hirosawa M., Nagase T., Ohara O.
    Brain Res. Mol. Brain Res. 94:85-95(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Brain.
  2. Nakajima D., Nakayama M., Kikuno R., Nagase T., Ohara O.
    Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION.
  3. "Multiple cadherins are expressed in human fibroblasts."
    Matsuyoshi N., Imamura S.
    Biochem. Biophys. Res. Commun. 235:355-358(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 434-570, TISSUE SPECIFICITY.
  4. Cited for: VARIANT [LARGE SCALE ANALYSIS] TRP-1583.
  5. Cited for: VARIANT VMLDS1 ILE-2370.

Entry informationi

Entry nameiPCD16_HUMAN
AccessioniPrimary (citable) accession number: Q96JQ0
Secondary accession number(s): O15098
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 11, 2002
Last sequence update: December 1, 2001
Last modified: October 29, 2014
This is version 114 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3