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Protein
Submitted name:

PIGS protein

Gene

PIGS

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
PIGS proteinImported
Gene namesi
Name:PIGSImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei438 – 46124HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA33301.

PTM / Processingi

Proteomic databases

PaxDbiQ96IR5.
PRIDEiQ96IR5.

Expressioni

Gene expression databases

BgeeiQ96IR5.
GenevisibleiQ96IR5. HS.

Interactioni

Protein-protein interaction databases

IntActiQ96IR5. 1 interaction.
STRINGi9606.ENSP00000309430.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2459. Eukaryota.
ENOG410XR9U. LUCA.
HOVERGENiHBG031822.
KOiK05291.

Family and domain databases

InterProiIPR019540. PtdIno-glycan_biosynth_class_S.
[Graphical view]
PANTHERiPTHR21072. PTHR21072. 1 hit.
PfamiPF10510. PIG-S. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q96IR5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
LPFTVVHERE IPLKYKMKIK CRFQKAYRRA LDHEEEALSS GSVQEAEAML
60 70 80 90 100
DEPQEQAEGS LTVYVISEHS SLLPQDMMSY IGPKRTAVVR GIMHREAFNI
110 120 130 140 150
IGRRIVQVAQ AMSLTEDVLA AALADHLPED KWSAEKRRPL KSSLGYEITF
160 170 180 190 200
SLLNPDPKSH DVYWDIEGAV RRYVQPFLNA LGAAGNFSVD SQILYYAMLG
210 220 230 240 250
VNPRFDSASS SYYLDMHSLP HVINPVESRL GSSAASLYPV LNFLLYVPEL
260 270 280 290 300
AHSPLYIQDK DGAPVATNAF HSPRWGGIMV YNVDSKTYNA SVLPVRVEVD
310 320 330 340 350
MVRVMEVFLA QLRLLFGIAQ PQLPPKCLLS GPTSEGLMTW ELDRLLWARS
360 370 380 390 400
VENLATATTT LTSLAQLLGK ISNIVIKDDV ASEVYKAVAA VQKSAEELAS
410 420 430 440 450
GHLASAFVAS QEAVTSSELA FFDPSLLHLL YFPDDQKFAI YIPLFLPMAV
460 470
PILLSLVKIF LETRKSWRKP EKTD
Length:474
Mass (Da):52,875
Last modified:December 16, 2008 - v2
Checksum:iAEFE091FBC4936F0
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC007301 mRNA. Translation: AAH07301.2.
RefSeqiNP_149975.1. NM_033198.3.
UniGeneiHs.462550.

Genome annotation databases

GeneIDi94005.
KEGGihsa:94005.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC007301 mRNA. Translation: AAH07301.2.
RefSeqiNP_149975.1. NM_033198.3.
UniGeneiHs.462550.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ96IR5. 1 interaction.
STRINGi9606.ENSP00000309430.

Proteomic databases

PaxDbiQ96IR5.
PRIDEiQ96IR5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi94005.
KEGGihsa:94005.

Organism-specific databases

CTDi94005.
PharmGKBiPA33301.

Phylogenomic databases

eggNOGiKOG2459. Eukaryota.
ENOG410XR9U. LUCA.
HOVERGENiHBG031822.
KOiK05291.

Miscellaneous databases

ChiTaRSiPIGS. human.
GenomeRNAii94005.

Gene expression databases

BgeeiQ96IR5.
GenevisibleiQ96IR5. HS.

Family and domain databases

InterProiIPR019540. PtdIno-glycan_biosynth_class_S.
[Graphical view]
PANTHERiPTHR21072. PTHR21072. 1 hit.
PfamiPF10510. PIG-S. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: EyeImported.

Entry informationi

Entry nameiQ96IR5_HUMAN
AccessioniPrimary (citable) accession number: Q96IR5
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 16, 2008
Last modified: June 8, 2016
This is version 63 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.