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Q96IH1 (Q96IH1_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length500 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Cytoplasmcytoskeleton By similarity PIRNR PIRNR005682.

Sequence similarities

Belongs to the fascin family. PIRNR PIRNR005682

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAH07539.1

Sequences

Sequence LengthMass (Da)Tools
Q96IH1 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 80B06895E8A6DD74

FASTA50055,136
        10         20         30         40         50         60 
SASSTATMTA NGTAEAVQIQ FGLINCGNKY LTAEAFGFKV NASASSLKKK QIWTLEQPPD 

        70         80         90        100        110        120 
EAGSAAVCLR SHLGRYLAAD KDGNVTCERE VPGPDCRFLI VAHDDGRWSL QSEAHRRYFG 

       130        140        150        160        170        180 
GTEDRLSCFA QTVSPAEKWS VHIAMHPQVN IYSVTRKRYA HLSARPADEI AVDRDVPWGV 

       190        200        210        220        230        240 
DSLITLAFQD QRYSVQTADH RFLRHDGRLV ARPEPATGYT LEFRSGKVAF RDCEGRYLAP 

       250        260        270        280        290        300 
SGPSGTLKAG KATKVGKDEL FALEQSCAQV VLQAANERNV STRQGMDLSA NQDEETDQET 

       310        320        330        340        350        360 
FQLEIDRDTK KCAFRTHTGK YWTLTATGGV QSTASSKNAS CYFDIEWRDR RITLRASNGK 

       370        380        390        400        410        420 
FVTSKKNGQL AASVETAGDS ELFLMKLINR PIIVFRGEHG FIGCRKVTGT LDANRSSYDV 

       430        440        450        460        470        480 
FQLEFNDGAY NIKDSTGKYW TVGSDSAVTS SGDTPVDFFF EFCDYNKVAI KVGGRYLKGD 

       490        500 
HAGVLKASAE TVDPASLWEY 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Muscle EMBL AAH07539.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC007539 mRNA. Translation: AAH07539.1.
UniGeneHs.118400.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

MINTMINT-1375527.

Proteomic databases

PRIDEQ96IH1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOGENOMHOG000267034.
HOVERGENHBG000968.

Gene expression databases

ArrayExpressQ96IH1.
BgeeQ96IH1.

Family and domain databases

InterProIPR008999. Actin_cross-linking.
IPR010431. Fascin.
IPR022768. Fascin-domain.
IPR024703. Fascin_metazoans.
[Graphical view]
PANTHERPTHR10551. PTHR10551. 1 hit.
PfamPF06268. Fascin. 4 hits.
[Graphical view]
PIRSFPIRSF005682. Fascin. 1 hit.
SUPFAMSSF50405. SSF50405. 4 hits.
ProtoNetSearch...

Other

ChiTaRSFSCN1. human.

Entry information

Entry nameQ96IH1_HUMAN
AccessionPrimary (citable) accession number: Q96IH1
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: April 16, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.