Reviewed,
UniProtKB/Swiss-Prot Q96HY7 (DHTK1_HUMAN)
Last modified
October 13, 2009.
Version 53.
History...
Clusters with 100%,
90%,
50% identity |
Documents (4) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial EC=1.2.4.2 Alternative name(s): Dehydrogenase E1 and transketolase domain-containing protein 1 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 919 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO2. It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3) By similarity. |
| Catalytic activity | 2-oxoglutarate + [dihydrolipoyllysine-residue succinyltransferase] lipoyllysine = [dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine + CO2. |
| Cofactor | Thiamine pyrophosphate By similarity. |
| Subcellular location | Mitochondrion Potential. |
| Sequence similarities | Belongs to the alpha-ketoglutarate dehydrogenase family. |
| Sequence caution | The sequence BAB13456.1 differs from that shown. Reason: Miscellaneous discrepancy. Chimeric cDNA. C-terminal exons are derived from the neighboring gene. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Glycolysis |
| Cellular component | Mitochondrion |
| Coding sequence diversity | Polymorphism |
| Domain | Transit peptide |
| Ligand | Thiamine pyrophosphate |
| Molecular function | Oxidoreductase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | glycolysis Inferred from electronic annotation. Source: UniProtKB-KW oxidation reductionInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | mitochondrion Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamin pyrophosphate bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Transit peptide | 1 – ? | Mitochondrion Potential | |||||||
| Chain | ? – 919 | Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial | PRO_0000307936 | ||||||
Natural variations | |||||||||
| Natural variant | 20 | 1 | L → F: dbSNP rs1279138. | VAR_036715 | |||||
| Natural variant | 272 | 1 | Y → D: dbSNP rs3740015. Ref.1 Ref.2 | VAR_036716 | |||||
| Natural variant | 308 | 1 | R → L: dbSNP rs17849603. Ref.1 | VAR_036717 | |||||
| Natural variant | 350 | 1 | N → D: dbSNP rs34716552. | VAR_036718 | |||||
| Natural variant | 607 | 1 | I → M: dbSNP rs2062988. Ref.1 Ref.2 Ref.3 | VAR_036719 | |||||
Sequences
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References
| [1] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANTS ASP-272; LEU-308 AND MET-607. Tissue: Kidney and Uterus. |
| [2] | "Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Kikuno R., Nakayama M., Hirosawa M., Ohara O. DNA Res. 7:273-281(2000) [PubMed: 10997877] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-886, VARIANTS ASP-272 AND MET-607. Tissue: Brain. |
| [3] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed: 17974005] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 380-919, VARIANT MET-607. Tissue: Melanoma. |
Cross-references
Sequence databases | |
|---|---|
| BC002477 mRNA. Translation: AAH02477.1. BC007955 mRNA. Translation: AAH07955.1. AB046850 mRNA. Translation: BAB13456.1. Sequence problems. CR749726 mRNA. Translation: CAH18489.1. | |
| IPI | IPI00063408. |
| PIR | T50617. |
| RefSeq | NP_061176.3. |
| UniGene | Hs.104980 Hs.711138 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q96HY7. |
PTM databases | |
| PhosphoSite | Q96HY7. |
Proteomic databases | |
| PRIDE | Q96HY7. |
Genome annotation databases | |
| Ensembl | ENST00000263035; ENSP00000263035; ENSG00000181192; Homo sapiens. [Genome view] ENST00000415935; ENSP00000400625; ENSG00000181192; Homo sapiens. [Genome view] ENST00000437298; ENSP00000388163; ENSG00000181192; Homo sapiens. [Genome view] ENST00000448829; ENSP00000398482; ENSG00000181192; Homo sapiens. [Genome view] |
| GeneID | 55526. |
| KEGG | hsa:55526. |
| UCSC | uc001ild.2. human. |
Organism-specific databases | |
| CTD | 55526. |
| GeneCards | GC10P012150. |
| HGNC | HGNC:23537. DHTKD1. |
| PharmGKB | PA134962952. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | Q96HY7. |
| HOVERGEN | Q96HY7. |
Enzyme and pathway databases | |
| BRENDA | 1.2.4.2. 247. |
Gene expression databases | |
| ArrayExpress | Q96HY7. |
| Bgee | Q96HY7. |
| CleanEx | HS_DHTKD1. |
| Genevestigator | Q96HY7. |
Family and domain databases | |
| InterPro | IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view] |
| PANTHER | PTHR23152. 2oxoglutarate_DH_E1. 1 hit. |
| Pfam | PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view] |
| PIRSF | PIRSF000157. Oxoglu_dh_E1. 1 hit. |
| TIGRFAMs | TIGR00239. 2oxo_dh_E1. 1 hit. |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 59950. |
Entry information
| Entry name | DHTK1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q96HY7 Secondary accession number(s): Q68CU5, Q9BUM8, Q9HCE2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 10 Human chromosome 10: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with


