Reviewed,
UniProtKB/Swiss-Prot Q96HF1 (SFRP2_HUMAN)
Last modified
January 19, 2010.
Version 71.
History...
Clusters with 100%,
90%,
50% identity |
Documents (5) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Secreted frizzled-related protein 2 Short name=sFRP-2 Alternative name(s): Secreted apoptosis-related protein 1 Short name=SARP-1 Frizzled-related protein 2 Short name=FRP-2 | ||||||
| Gene names |
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| Organism | Homo sapiens (Human) [Complete proteome] | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 295 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Soluble frizzled-related proteins (sFRPS) function as modulators of Wnt signaling through direct interaction with Wnts. They have a role in regulating cell growth and differentiation in specific cell types. SFRP2 may be important for eye retinal development and for myogenesis. |
| Subcellular location | Secreted By similarity. |
| Tissue specificity | Expressed in adipose tissue, heart, brain, skeletal muscle, pancreas, thymus, prostate, testis, ovary, small intestine and colon. Highest levels in adipose tissue, small intestine and colon. Ref.1 Ref.7 |
| Domain | The FZ domain is involved in binding with Wnt ligands By similarity. |
| Sequence similarities | Belongs to the secreted frizzled-related protein (sFRP) family. Contains 1 FZ (frizzled) domain. Contains 1 NTR domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Differentiation Wnt signaling pathway |
| Cellular component | Secreted |
| Coding sequence diversity | Polymorphism |
| Domain | Signal |
| Molecular function | Developmental protein |
| PTM | Disulfide bond Phosphoprotein |
| Technical term | Complete proteome Direct protein sequencing |
| Gene Ontology (GO) | |
| Biological process | Wnt receptor signaling pathway Inferred from electronic annotation. Source: UniProtKB-KW cell differentiationInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | extracellular region Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | protein binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 24 | 24 | Ref.8 | ||||||||
| Chain | 25 – 295 | 271 | Secreted frizzled-related protein 2 | PRO_0000032542 | |||||||
Regions | |||||||||||
| Domain | 35 – 155 | 121 | FZ | ||||||||
| Domain | 172 – 295 | 124 | NTR | ||||||||
Amino acid modifications | |||||||||||
| Modified residue | 289 | 1 | Phosphoserine Ref.9 | ||||||||
| Disulfide bond | 40 ↔ 103 | By similarity | |||||||||
| Disulfide bond | 50 ↔ 96 | By similarity | |||||||||
| Disulfide bond | 87 ↔ 125 | By similarity | |||||||||
| Disulfide bond | 114 ↔ 152 | By similarity | |||||||||
| Disulfide bond | 118 ↔ 142 | By similarity | |||||||||
| Disulfide bond | 172 ↔ 245 | By similarity | |||||||||
| Disulfide bond | 175 ↔ 247 | By similarity | |||||||||
| Disulfide bond | 190 ↔ 295 | By similarity | |||||||||
Natural variations | |||||||||||
| Natural variant | 45 | 1 | A → V: dbSNP rs4643790. Ref.3 Ref.6 | VAR_051963 | |||||||
Experimental info | |||||||||||
| Sequence conflict | 132 – 133 | 2 | Missing in AAB70792. Ref.7 | ||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Tissue restricted expression of two human Frzbs in preadipocytes and pancreas." Hu E., Zhu Y., Fredrickson T., Barnes M., Kelsell D., Beeley L., Brooks D. Biochem. Biophys. Res. Commun. 247:287-293(1998) [PubMed: 9642118] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY. |
| [2] | "Characterization of FKSG12, a novel protein related to pancreas tumor." Wang Y.-G. Submitted (OCT-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [3] | "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment." Clark H.F., Gurney A.L., Abaya E., Baker K., Baldwin D.T., Brush J., Chen J., Chow B., Chui C., Crowley C., Currell B., Deuel B., Dowd P., Eaton D., Foster J.S., Grimaldi C., Gu Q., Hass P.E. Gray A.M.Genome Res. 13:2265-2270(2003) [PubMed: 12975309] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT VAL-45. |
| [4] | "Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries." Otsuki T., Ota T., Nishikawa T., Hayashi K., Suzuki Y., Yamamoto J., Wakamatsu A., Kimura K., Sakamoto K., Hatano N., Kawai Y., Ishii S., Saito K., Kojima S., Sugiyama T., Ono T., Okano K., Yoshikawa Y. Isogai T.DNA Res. 12:117-126(2005) [PubMed: 16303743] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [5] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT VAL-45. Tissue: Eye. |
| [7] | "SARPs: a family of secreted apoptosis-related proteins." Melkonyan H.S., Chang W.C., Shapiro J.P., Mahadevappa M., Fitzpatrick P.A., Kiefer M.C., Tomei L.D., Umansky S.R. Proc. Natl. Acad. Sci. U.S.A. 94:13636-13641(1997) [PubMed: 9391078] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1-208, TISSUE SPECIFICITY. |
| [8] | "Signal peptide prediction based on analysis of experimentally verified cleavage sites." Zhang Z., Henzel W.J. Protein Sci. 13:2819-2824(2004) [PubMed: 15340161] [Abstract] Cited for: PROTEIN SEQUENCE OF 25-39. |
| [9] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed: 17081983] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-289, MASS SPECTROMETRY. Tissue: Epithelium. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF311912 mRNA. Translation: AAG24923.1. AY359001 mRNA. Translation: AAQ89360.1. AK075372 mRNA. Translation: BAG52124.1. CH471056 Genomic DNA. Translation: EAX04949.1. BC008666 mRNA. Translation: AAH08666.1. AF017986 mRNA. Translation: AAB70792.1. |
| IPI | IPI00027596. |
| PIR | JE0174. |
| RefSeq | NP_003004.1. |
| UniGene | Hs.481022 |
3D structure databases | |
| SMR | Q96HF1. Positions 39-154. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q96HF1. |
Proteomic databases | |
| PRIDE | Q96HF1. |
Genome annotation databases | |
| Ensembl | ENST00000274063; ENSP00000274063; ENSG00000145423; Homo sapiens. [Genome view] |
| GeneID | 6423. |
| KEGG | hsa:6423. |
| UCSC | uc003inv.1. human. |
Organism-specific databases | |
| CTD | 6423. |
| GeneCards | GC04M154921. |
| H-InvDB | HIX0004583. |
| HGNC | HGNC:10777. SFRP2. |
| HPA | HPA002652. |
| MIM | 604157. gene. |
| PharmGKB | PA35693. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG08093. |
| HOGENOM | HBG713519. |
| HOVERGEN | Q96HF1. |
| InParanoid | Q96HF1. |
| OMA | CKNKNED. |
| OrthoDB | EOG9WWV46. |
| PhylomeDB | Q96HF1. |
Gene expression databases | |
| ArrayExpress | Q96HF1. |
| Bgee | Q96HF1. |
| CleanEx | HS_SFRP2. |
| Genevestigator | Q96HF1. |
| GermOnline | ENSG00000145423. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR020067. Frizzled-like_dom. IPR000024. Frizzled_Cys-rich. IPR020068. Frizzled_dom_subgr. IPR015526. Frizzled_related. IPR001134. Netrin_domain. IPR018933. Netrin_module_non-TIMP. IPR008993. TIMP-like_OB-fold. [Graphical view] |
| Gene3D | G3DSA:1.10.2000.10. Frizzled_Cys-rich. 1 hit. |
| PANTHER | PTHR11309. Fz_related. 1 hit. |
| Pfam | PF01392. Fz. 1 hit. PF01759. NTR. 1 hit. [Graphical view] |
| SMART | SM00643. C345C. 1 hit. SM00063. FRI. 1 hit. [Graphical view] |
| PROSITE | PS50038. FZ. 1 hit. PS50189. NTR. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 24943. |
| SOURCE | Search... |
Entry information
| Entry name | SFRP2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q96HF1 Secondary accession number(s): B3KQR2, O14778, Q9HAP5 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 4 Human chromosome 4: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


