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Q96GX2

- A7L3B_HUMAN

UniProt

Q96GX2 - A7L3B_HUMAN

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Protein

Putative ataxin-7-like protein 3B

Gene
ATXN7L3B
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ataxin-7-like protein 3B
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 12

Organism-specific databases

HGNCiHGNC:37931. ATXN7L3B.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165512339.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9797Putative ataxin-7-like protein 3BPRO_0000392529Add
BLAST

Proteomic databases

MaxQBiQ96GX2.
PRIDEiQ96GX2.

PTM databases

PhosphoSiteiQ96GX2.

Expressioni

Gene expression databases

BgeeiQ96GX2.

Interactioni

Protein-protein interaction databases

BioGridi139266. 2 interactions.
IntActiQ96GX2. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliQ96GX2.

Family & Domainsi

Sequence similaritiesi

Belongs to the SGF11 family.

Phylogenomic databases

OMAiEYFETIM.
OrthoDBiEOG7BZVTK.
PhylomeDBiQ96GX2.
TreeFamiTF353123.

Sequencei

Sequence statusi: Complete.

Q96GX2-1 [UniParc]FASTAAdd to Basket

« Hide

MEEISLANLD TNKLEAIAQE IYVDLIEDSC LGFCFEVHRA VKCGYFYLEF   50
AETGSVKDFG IQPVEDKGAC RLPLCSLPGE PGNGPDQQLQ RSPPEFQ 97
Length:97
Mass (Da):10,771
Last modified:March 23, 2010 - v2
Checksum:i722ADB410FCEFC9A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC025257 Genomic DNA. No translation available.
BC009111 mRNA. Translation: AAH09111.1. Sequence problems.
CCDSiCCDS53815.1.
RefSeqiNP_001129734.1. NM_001136262.1.
UniGeneiHs.744849.

Genome annotation databases

EnsembliENST00000519948; ENSP00000430000; ENSG00000253719.
GeneIDi552889.
KEGGihsa:552889.
UCSCiuc001sxd.4. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC025257 Genomic DNA. No translation available.
BC009111 mRNA. Translation: AAH09111.1 . Sequence problems.
CCDSi CCDS53815.1.
RefSeqi NP_001129734.1. NM_001136262.1.
UniGenei Hs.744849.

3D structure databases

ProteinModelPortali Q96GX2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 139266. 2 interactions.
IntActi Q96GX2. 1 interaction.

PTM databases

PhosphoSitei Q96GX2.

Proteomic databases

MaxQBi Q96GX2.
PRIDEi Q96GX2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000519948 ; ENSP00000430000 ; ENSG00000253719 .
GeneIDi 552889.
KEGGi hsa:552889.
UCSCi uc001sxd.4. human.

Organism-specific databases

CTDi 552889.
GeneCardsi GC12P074931.
HGNCi HGNC:37931. ATXN7L3B.
MIMi 615579. gene.
neXtProti NX_Q96GX2.
PharmGKBi PA165512339.
GenAtlasi Search...

Phylogenomic databases

OMAi EYFETIM.
OrthoDBi EOG7BZVTK.
PhylomeDBi Q96GX2.
TreeFami TF353123.

Miscellaneous databases

ChiTaRSi ATXN7L3B. human.
GenomeRNAii 552889.
NextBioi 112362.
PROi Q96GX2.
SOURCEi Search...

Gene expression databases

Bgeei Q96GX2.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The finished DNA sequence of human chromosome 12."
    Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R.
    , Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Montgomery K.T., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.-Z., Steffen D., Lovering R.C., Wheeler D.A., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clerc-Blankenburg K.P., Davis C., Delgado O., Dinh H.H., Draper H., Gonzalez-Garay M.L., Havlak P., Jackson L.R., Jacob L.S., Kelly S.H., Li L., Li Z., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V., Okwuonu G.O., Pasternak S., Perez L.M., Plopper F.J.H., Santibanez J., Shen H., Tabor P.E., Verduzco D., Waldron L., Wang Q., Williams G.A., Zhang J., Zhou J., Allen C.C., Amin A.G., Anyalebechi V., Bailey M., Barbaria J.A., Bimage K.E., Bryant N.P., Burch P.E., Burkett C.E., Burrell K.L., Calderon E., Cardenas V., Carter K., Casias K., Cavazos I., Cavazos S.R., Ceasar H., Chacko J., Chan S.N., Chavez D., Christopoulos C., Chu J., Cockrell R., Cox C.D., Dang M., Dathorne S.R., David R., Davis C.M., Davy-Carroll L., Deshazo D.R., Donlin J.E., D'Souza L., Eaves K.A., Egan A., Emery-Cohen A.J., Escotto M., Flagg N., Forbes L.D., Gabisi A.M., Garza M., Hamilton C., Henderson N., Hernandez O., Hines S., Hogues M.E., Huang M., Idlebird D.G., Johnson R., Jolivet A., Jones S., Kagan R., King L.M., Leal B., Lebow H., Lee S., LeVan J.M., Lewis L.C., London P., Lorensuhewa L.M., Loulseged H., Lovett D.A., Lucier A., Lucier R.L., Ma J., Madu R.C., Mapua P., Martindale A.D., Martinez E., Massey E., Mawhiney S., Meador M.G., Mendez S., Mercado C., Mercado I.C., Merritt C.E., Miner Z.L., Minja E., Mitchell T., Mohabbat F., Mohabbat K., Montgomery B., Moore N., Morris S., Munidasa M., Ngo R.N., Nguyen N.B., Nickerson E., Nwaokelemeh O.O., Nwokenkwo S., Obregon M., Oguh M., Oragunye N., Oviedo R.J., Parish B.J., Parker D.N., Parrish J., Parks K.L., Paul H.A., Payton B.A., Perez A., Perrin W., Pickens A., Primus E.L., Pu L.-L., Puazo M., Quiles M.M., Quiroz J.B., Rabata D., Reeves K., Ruiz S.J., Shao H., Sisson I., Sonaike T., Sorelle R.P., Sutton A.E., Svatek A.F., Svetz L.A., Tamerisa K.S., Taylor T.R., Teague B., Thomas N., Thorn R.D., Trejos Z.Y., Trevino B.K., Ukegbu O.N., Urban J.B., Vasquez L.I., Vera V.A., Villasana D.M., Wang L., Ward-Moore S., Warren J.T., Wei X., White F., Williamson A.L., Wleczyk R., Wooden H.S., Wooden S.H., Yen J., Yoon L., Yoon V., Zorrilla S.E., Nelson D., Kucherlapati R., Weinstock G., Gibbs R.A.
    Nature 440:346-351(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Cervix.
  3. "Genome-wide survey for biologically functional pseudogenes."
    Svensson O., Arvestad L., Lagergren J.
    PLoS Comput. Biol. 2:E46-E46(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiA7L3B_HUMAN
AccessioniPrimary (citable) accession number: Q96GX2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 23, 2010
Last sequence update: March 23, 2010
Last modified: July 9, 2014
This is version 61 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Miscellaneous

Encoded by an expressed retrotransposed copy of the ATXN7L3 locus that emerged prior to the speciation event separating primates and rodents.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 12
    Human chromosome 12: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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