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Protein

Protein FAM89A

Gene

FAM89A

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM89A
Gene namesi
Name:FAM89A
Synonyms:C1orf153
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

HGNCiHGNC:25057. FAM89A.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA142671794.

Polymorphism and mutation databases

BioMutaiFAM89A.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 184184Protein FAM89APRO_0000271761Add
BLAST

Proteomic databases

MaxQBiQ96GI7.
PaxDbiQ96GI7.
PRIDEiQ96GI7.

PTM databases

iPTMnetiQ96GI7.
PhosphoSiteiQ96GI7.

Expressioni

Gene expression databases

BgeeiQ96GI7.
CleanExiHS_FAM89A.
GenevisibleiQ96GI7. HS.

Organism-specific databases

HPAiHPA059052.
HPA059578.

Interactioni

Protein-protein interaction databases

BioGridi131954. 1 interaction.
STRINGi9606.ENSP00000355614.

Structurei

3D structure databases

ProteinModelPortaliQ96GI7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FAM89 family.Curated

Phylogenomic databases

eggNOGiENOG410IWGT. Eukaryota.
ENOG4112BND. LUCA.
GeneTreeiENSGT00640000091503.
HOGENOMiHOG000112489.
HOVERGENiHBG081515.
InParanoidiQ96GI7.
OMAiEYKGSCQ.
OrthoDBiEOG7BP84B.
PhylomeDBiQ96GI7.

Sequencei

Sequence statusi: Complete.

Q96GI7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGARAAPGA AGNGAVRGLR VDGLPPLPKS LSGLLHSASG GGASGGWRHL
60 70 80 90 100
ERLYAQKSRI QDELSRGGPG GGGARAAALP AKPPNLDAAL ALLRKEMVGL
110 120 130 140 150
RQLDMSLLCQ LYSLYESIQE YKGACQAASS PDCTYALENG FFDEEEEYFQ
160 170 180
EQNSLHDRRD RGPPRDLSLP VSSLSSSDWI LESI
Length:184
Mass (Da):19,569
Last modified:December 1, 2001 - v1
Checksum:iE727C153156C0004
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL732414 Genomic DNA. Translation: CAH73704.1.
BC009447 mRNA. Translation: AAH09447.1.
CCDSiCCDS1590.1.
RefSeqiNP_940954.1. NM_198552.2.
UniGeneiHs.38516.

Genome annotation databases

EnsembliENST00000366654; ENSP00000355614; ENSG00000182118.
GeneIDi375061.
KEGGihsa:375061.
UCSCiuc001hui.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL732414 Genomic DNA. Translation: CAH73704.1.
BC009447 mRNA. Translation: AAH09447.1.
CCDSiCCDS1590.1.
RefSeqiNP_940954.1. NM_198552.2.
UniGeneiHs.38516.

3D structure databases

ProteinModelPortaliQ96GI7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi131954. 1 interaction.
STRINGi9606.ENSP00000355614.

PTM databases

iPTMnetiQ96GI7.
PhosphoSiteiQ96GI7.

Polymorphism and mutation databases

BioMutaiFAM89A.

Proteomic databases

MaxQBiQ96GI7.
PaxDbiQ96GI7.
PRIDEiQ96GI7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000366654; ENSP00000355614; ENSG00000182118.
GeneIDi375061.
KEGGihsa:375061.
UCSCiuc001hui.3. human.

Organism-specific databases

CTDi375061.
GeneCardsiFAM89A.
HGNCiHGNC:25057. FAM89A.
HPAiHPA059052.
HPA059578.
neXtProtiNX_Q96GI7.
PharmGKBiPA142671794.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IWGT. Eukaryota.
ENOG4112BND. LUCA.
GeneTreeiENSGT00640000091503.
HOGENOMiHOG000112489.
HOVERGENiHBG081515.
InParanoidiQ96GI7.
OMAiEYKGSCQ.
OrthoDBiEOG7BP84B.
PhylomeDBiQ96GI7.

Miscellaneous databases

GenomeRNAii375061.
PROiQ96GI7.

Gene expression databases

BgeeiQ96GI7.
CleanExiHS_FAM89A.
GenevisibleiQ96GI7. HS.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence and biological annotation of human chromosome 1."
    Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
    , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.
    Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Muscle.
  3. "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome."
    Bian Y., Song C., Cheng K., Dong M., Wang F., Huang J., Sun D., Wang L., Ye M., Zou H.
    J. Proteomics 96:253-262(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Liver.

Entry informationi

Entry nameiFA89A_HUMAN
AccessioniPrimary (citable) accession number: Q96GI7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: December 1, 2001
Last modified: June 8, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.