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Q96FF7 (YS003_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein LOC113230
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length361 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Coding sequence diversityPolymorphism
   DomainCoiled coil
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 361361Uncharacterized protein LOC113230
PRO_0000318963

Regions

Coiled coil294 – 31825 Potential

Natural variations

Natural variant3401V → A.
Corresponds to variant rs7258963 [ dbSNP | Ensembl ].
VAR_039392

Sequences

Sequence LengthMass (Da)Tools
Q96FF7 [UniParc].

Last modified February 26, 2008. Version 3.
Checksum: B0F0A14E86DE60CC

FASTA36139,005
        10         20         30         40         50         60 
MAPQRAGPGL GKPSSKKSRA LRGGPGVPRA RQRSPRAAAE LNTEVPKPSA KDVEILEQES 

        70         80         90        100        110        120 
EVLEPSVEQD AESPGLSTAA GFESPEPGRD DPGPSEAQRA EVQGQHPPPG PKTSSSRSGS 

       130        140        150        160        170        180 
EAPHLRFPPC PEAPQRPPEE RFMETPIERE IRRSCEREES LRRSRGLSPG RAGRELVELR 

       190        200        210        220        230        240 
VRPVLNLPGP GPALPRALER ARAGAQMQRD IEREAHRQAA LARPAVPEPR ARSPPQPLGE 

       250        260        270        280        290        300 
LKRFFEAAAG SGSSAGAGDG AGPQRLPEPG GRPRSAVQGG CRVLGSAPPP FTPSLLEQEV 

       310        320        330        340        350        360 
RAVREREQEL QRQRRSVYGT AEFKEPTPSL TASRGDGKLV VIWPPRRKVS ENGLEQEERK 


P 

« Hide

References

[1]"The DNA sequence and biology of human chromosome 19."
Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V. expand/collapse author list , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 43-361.
Tissue: Lung.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC022098 Genomic DNA. No translation available.
BC011002 mRNA. No translation available.
UniGeneHs.372775.

3D structure databases

ProteinModelPortalQ96FF7.
ModBaseSearch...
MobiDBSearch...

PTM databases

PhosphoSiteQ96FF7.

Polymorphism databases

DMDM172045854.

Proteomic databases

PaxDbQ96FF7.
PRIDEQ96FF7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCuc002mxz.3. human.

Organism-specific databases

GeneCardsGC19P014187.
HPAHPA042225.
neXtProtNX_Q96FF7.

Phylogenomic databases

eggNOGNOG249161.
HOGENOMHOG000155689.
InParanoidQ96FF7.
OMAFPPCPEA.
PhylomeDBQ96FF7.

Gene expression databases

ArrayExpressQ96FF7.
BgeeQ96FF7.
GenevestigatorQ96FF7.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameYS003_HUMAN
AccessionPrimary (citable) accession number: Q96FF7
Entry history
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: February 26, 2008
Last modified: April 16, 2014
This is version 62 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human chromosome 19

Human chromosome 19: entries, gene names and cross-references to MIM