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Q96EL1

- F212A_HUMAN

UniProt

Q96EL1 - F212A_HUMAN

Protein

Protein FAM212A

Gene

FAM212A

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 1 (01 Dec 2001)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. neural tube development Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein FAM212A
    Gene namesi
    Name:FAM212A
    Synonyms:C3orf54
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 3

    Organism-specific databases

    HGNCiHGNC:32480. FAM212A.

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular vesicular exosome Source: UniProt

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA143485330.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 285285Protein FAM212APRO_0000239717Add
    BLAST

    Proteomic databases

    PaxDbiQ96EL1.
    PRIDEiQ96EL1.

    PTM databases

    PhosphoSiteiQ96EL1.

    Expressioni

    Gene expression databases

    BgeeiQ96EL1.
    CleanExiHS_C3orf54.
    GenevestigatoriQ96EL1.

    Organism-specific databases

    HPAiHPA041879.

    Interactioni

    Protein-protein interaction databases

    BioGridi132984. 1 interaction.
    STRINGi9606.ENSP00000329735.

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi63 – 719Poly-Glu

    Sequence similaritiesi

    Belongs to the FAM212 family.Curated

    Phylogenomic databases

    eggNOGiNOG44123.
    HOGENOMiHOG000294066.
    HOVERGENiHBG066206.
    InParanoidiQ96EL1.
    OrthoDBiEOG79CZ04.
    PhylomeDBiQ96EL1.
    TreeFamiTF332839.

    Family and domain databases

    InterProiIPR029267. FAM212.
    [Graphical view]
    PfamiPF15342. FAM212. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q96EL1-1 [UniParc]FASTAAdd to Basket

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    MHSARLDSFL SQLRWELLCG RDTGSPSMPG PLQPTSQTGP DVQPSHQLRA    50
    SGALEEDSVC CVEEEEEEEE EAVVTEDRDA ALGGPREHAL DWDSGFSEVS 100
    GSTWREEELP VSQRPAPSAQ PLRRQCLSVS GLPMPSRAPV ASVPPVHHPR 150
    PKSTPDACLE HWQGLEAEDW TAALLNRGRS RQPLVLGDNC FADLVHNWME 200
    LPETGSEGGD GGGHRARARP PQFLLGLSEQ LRRRLARARR TAMAGKRLSC 250
    PPRPEPELPA DVSRFAALMS CRSRQPIICN DVSYL 285
    Length:285
    Mass (Da):31,328
    Last modified:December 1, 2001 - v1
    Checksum:i230722F958009C12
    GO

    Sequence cautioni

    The sequence AAH12170.2 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC139451 Genomic DNA. No translation available.
    BC012170 mRNA. Translation: AAH12170.2. Different initiation.
    RefSeqiNP_976248.1. NM_203370.1.
    UniGeneiHs.86674.

    Genome annotation databases

    EnsembliENST00000333323; ENSP00000329735; ENSG00000185614.
    GeneIDi389119.
    KEGGihsa:389119.
    UCSCiuc003cxq.1. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC139451 Genomic DNA. No translation available.
    BC012170 mRNA. Translation: AAH12170.2 . Different initiation.
    RefSeqi NP_976248.1. NM_203370.1.
    UniGenei Hs.86674.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 132984. 1 interaction.
    STRINGi 9606.ENSP00000329735.

    PTM databases

    PhosphoSitei Q96EL1.

    Proteomic databases

    PaxDbi Q96EL1.
    PRIDEi Q96EL1.

    Protocols and materials databases

    DNASUi 389119.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000333323 ; ENSP00000329735 ; ENSG00000185614 .
    GeneIDi 389119.
    KEGGi hsa:389119.
    UCSCi uc003cxq.1. human.

    Organism-specific databases

    CTDi 389119.
    GeneCardsi GC03P049840.
    HGNCi HGNC:32480. FAM212A.
    HPAi HPA041879.
    neXtProti NX_Q96EL1.
    PharmGKBi PA143485330.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG44123.
    HOGENOMi HOG000294066.
    HOVERGENi HBG066206.
    InParanoidi Q96EL1.
    OrthoDBi EOG79CZ04.
    PhylomeDBi Q96EL1.
    TreeFami TF332839.

    Miscellaneous databases

    GenomeRNAii 389119.
    NextBioi 102604.
    PROi Q96EL1.

    Gene expression databases

    Bgeei Q96EL1.
    CleanExi HS_C3orf54.
    Genevestigatori Q96EL1.

    Family and domain databases

    InterProi IPR029267. FAM212.
    [Graphical view ]
    Pfami PF15342. FAM212. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence, annotation and analysis of human chromosome 3."
      Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J.
      , Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.-Z., Steffen D., Wei S., Wheeler D.A., Wright M.W., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P., Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H., Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J., Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W., Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V., Okwuonu G.O., Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B., Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H., Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J., Wang J., Wang Q., Williams G.A., Wong G.K.-S., Yao Z., Zhang J., Zhang X., Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R., Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.
      Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Skin.

    Entry informationi

    Entry nameiF212A_HUMAN
    AccessioniPrimary (citable) accession number: Q96EL1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 13, 2006
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 74 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 3
      Human chromosome 3: entries, gene names and cross-references to MIM
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3