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Protein

Protein FAM212A

Gene

FAM212A

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  1. neural tube development Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM212A
Gene namesi
Name:FAM212A
Synonyms:C3orf54
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 3

Organism-specific databases

HGNCiHGNC:32480. FAM212A.

Subcellular locationi

GO - Cellular componenti

  1. extracellular vesicular exosome Source: UniProtKB
Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA143485330.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 285285Protein FAM212APRO_0000239717Add
BLAST

Proteomic databases

PaxDbiQ96EL1.
PRIDEiQ96EL1.

PTM databases

PhosphoSiteiQ96EL1.

Expressioni

Gene expression databases

BgeeiQ96EL1.
CleanExiHS_C3orf54.
GenevestigatoriQ96EL1.

Organism-specific databases

HPAiHPA041879.

Interactioni

Protein-protein interaction databases

BioGridi132984. 2 interactions.
STRINGi9606.ENSP00000329735.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi63 – 719Poly-Glu

Sequence similaritiesi

Belongs to the FAM212 family.Curated

Phylogenomic databases

eggNOGiNOG44123.
HOGENOMiHOG000294066.
HOVERGENiHBG066206.
InParanoidiQ96EL1.
OrthoDBiEOG79CZ04.
PhylomeDBiQ96EL1.
TreeFamiTF332839.

Family and domain databases

InterProiIPR029267. FAM212.
[Graphical view]
PfamiPF15342. FAM212. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q96EL1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHSARLDSFL SQLRWELLCG RDTGSPSMPG PLQPTSQTGP DVQPSHQLRA
60 70 80 90 100
SGALEEDSVC CVEEEEEEEE EAVVTEDRDA ALGGPREHAL DWDSGFSEVS
110 120 130 140 150
GSTWREEELP VSQRPAPSAQ PLRRQCLSVS GLPMPSRAPV ASVPPVHHPR
160 170 180 190 200
PKSTPDACLE HWQGLEAEDW TAALLNRGRS RQPLVLGDNC FADLVHNWME
210 220 230 240 250
LPETGSEGGD GGGHRARARP PQFLLGLSEQ LRRRLARARR TAMAGKRLSC
260 270 280
PPRPEPELPA DVSRFAALMS CRSRQPIICN DVSYL
Length:285
Mass (Da):31,328
Last modified:December 1, 2001 - v1
Checksum:i230722F958009C12
GO

Sequence cautioni

The sequence AAH12170.2 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC139451 Genomic DNA. No translation available.
BC012170 mRNA. Translation: AAH12170.2. Different initiation.
RefSeqiNP_976248.1. NM_203370.1.
UniGeneiHs.86674.

Genome annotation databases

EnsembliENST00000333323; ENSP00000329735; ENSG00000185614.
GeneIDi389119.
KEGGihsa:389119.
UCSCiuc003cxq.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC139451 Genomic DNA. No translation available.
BC012170 mRNA. Translation: AAH12170.2. Different initiation.
RefSeqiNP_976248.1. NM_203370.1.
UniGeneiHs.86674.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi132984. 2 interactions.
STRINGi9606.ENSP00000329735.

PTM databases

PhosphoSiteiQ96EL1.

Proteomic databases

PaxDbiQ96EL1.
PRIDEiQ96EL1.

Protocols and materials databases

DNASUi389119.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000333323; ENSP00000329735; ENSG00000185614.
GeneIDi389119.
KEGGihsa:389119.
UCSCiuc003cxq.1. human.

Organism-specific databases

CTDi389119.
GeneCardsiGC03P049840.
HGNCiHGNC:32480. FAM212A.
HPAiHPA041879.
neXtProtiNX_Q96EL1.
PharmGKBiPA143485330.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG44123.
HOGENOMiHOG000294066.
HOVERGENiHBG066206.
InParanoidiQ96EL1.
OrthoDBiEOG79CZ04.
PhylomeDBiQ96EL1.
TreeFamiTF332839.

Miscellaneous databases

GenomeRNAii389119.
NextBioi102604.
PROiQ96EL1.

Gene expression databases

BgeeiQ96EL1.
CleanExiHS_C3orf54.
GenevestigatoriQ96EL1.

Family and domain databases

InterProiIPR029267. FAM212.
[Graphical view]
PfamiPF15342. FAM212. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence, annotation and analysis of human chromosome 3."
    Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J.
    , Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.-Z., Steffen D., Wei S., Wheeler D.A., Wright M.W., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P., Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H., Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J., Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W., Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V., Okwuonu G.O., Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B., Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H., Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J., Wang J., Wang Q., Williams G.A., Wong G.K.-S., Yao Z., Zhang J., Zhang X., Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R., Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.
    Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Skin.

Entry informationi

Entry nameiF212A_HUMAN
AccessioniPrimary (citable) accession number: Q96EL1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 13, 2006
Last sequence update: December 1, 2001
Last modified: March 4, 2015
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 3
    Human chromosome 3: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.