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Q96EG3

- ZN837_HUMAN

UniProt

Q96EG3 - ZN837_HUMAN

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Protein
Zinc finger protein 837
Gene
ZNF837
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

May be involved in transcriptional regulation By similarity.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri271 – 29323C2H2-type 1
Add
BLAST
Zinc fingeri299 – 32123C2H2-type 2
Add
BLAST
Zinc fingeri363 – 38523C2H2-type 3
Add
BLAST
Zinc fingeri391 – 41323C2H2-type 4
Add
BLAST
Zinc fingeri419 – 44123C2H2-type 5
Add
BLAST
Zinc fingeri447 – 46923C2H2-type 6
Add
BLAST
Zinc fingeri475 – 49723C2H2-type 7
Add
BLAST
Zinc fingeri503 – 52523C2H2-type 8
Add
BLAST

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein 837
Gene namesi
Name:ZNF837
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 19

Organism-specific databases

HGNCiHGNC:25164. ZNF837.

Subcellular locationi

Nucleus Reviewed prediction

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162410789.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 531531Zinc finger protein 837
PRO_0000321906Add
BLAST

Proteomic databases

PaxDbiQ96EG3.
PRIDEiQ96EG3.

PTM databases

PhosphoSiteiQ96EG3.

Expressioni

Gene expression databases

BgeeiQ96EG3.
CleanExiHS_ZNF837.
GenevestigatoriQ96EG3.

Organism-specific databases

HPAiHPA042833.

Structurei

3D structure databases

ProteinModelPortaliQ96EG3.
SMRiQ96EG3. Positions 80-146, 202-525.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiCOG5048.
HOGENOMiHOG000234617.
InParanoidiQ96EG3.
OMAiLYACDEC.
OrthoDBiEOG7KSX7Q.
PhylomeDBiQ96EG3.
TreeFamiTF337005.

Family and domain databases

Gene3Di3.30.160.60. 8 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 8 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 8 hits.
PS50157. ZINC_FINGER_C2H2_2. 8 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q96EG3-1 [UniParc]FASTAAdd to Basket

« Hide

MEAPAQKAGQ GGLPKADAQG ASGAREKRPE EPRPLEEDRA GSRPTQKGDL    50
RGAAGGRTTP PGGGSRGCSL GVSPGPGTRH SAGTRPLVRE PCGPTSSQNP 100
ELVIPEGLQA REGPCRSPAR GGDCSRNSCL AWHRGAPAGE TPPVCDPCPE 150
RIQNHPRTQL CEVHTDCWPC QPGTGAPTCP RTPKPTSRGR NPLVEQPRAC 200
ACGEAFAWRA LRIPQERLQA TEEPRPCARC GKRFRPNQQQ QAGKSPPVCP 250
ECGQTSRPRP IVPDPPAQRL YACDECGKAF TRTSSLLQHQ RIHTGERPYE 300
CAECGKAFVR CSGLYRHQKT HSAERHRRGP VLARRAFRLG CPPCGDYSER 350
SPRRGSGAGE KPYECADCAK AFGLFSHLVE HRRVHTGEKP YACPECGKAF 400
NQRSNLSRHQ RTHSSAKPYA CPLCEKAFKG RSGLVQHQRA HTGERPYGCS 450
ECGKTFRGCS ELRQHERLHS GEKPYICRDC GKAFVRNCSL VRHLRTHTGE 500
RPYACGDCGR AFSQRSNLNE HRKRHGGRAA P 531
Length:531
Mass (Da):58,078
Last modified:September 19, 2006 - v2
Checksum:i40329D17EDD39737
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti153 – 1531Q → R.
Corresponds to variant rs7256940 [ dbSNP | Ensembl ].
VAR_039373
Natural varianti242 – 2421A → T.
Corresponds to variant rs7255596 [ dbSNP | Ensembl ].
VAR_061979

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC012365 mRNA. Translation: AAH12365.2.
CCDSiCCDS46216.1.
RefSeqiNP_612475.1. NM_138466.1.
UniGeneiHs.222236.

Genome annotation databases

EnsembliENST00000427624; ENSP00000405699; ENSG00000152475.
ENST00000597582; ENSP00000471478; ENSG00000152475.
GeneIDi116412.
KEGGihsa:116412.
UCSCiuc002qsl.4. human.

Polymorphism databases

DMDMi121946273.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC012365 mRNA. Translation: AAH12365.2 .
CCDSi CCDS46216.1.
RefSeqi NP_612475.1. NM_138466.1.
UniGenei Hs.222236.

3D structure databases

ProteinModelPortali Q96EG3.
SMRi Q96EG3. Positions 80-146, 202-525.
ModBasei Search...
MobiDBi Search...

PTM databases

PhosphoSitei Q96EG3.

Polymorphism databases

DMDMi 121946273.

Proteomic databases

PaxDbi Q96EG3.
PRIDEi Q96EG3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000427624 ; ENSP00000405699 ; ENSG00000152475 .
ENST00000597582 ; ENSP00000471478 ; ENSG00000152475 .
GeneIDi 116412.
KEGGi hsa:116412.
UCSCi uc002qsl.4. human.

Organism-specific databases

CTDi 116412.
GeneCardsi GC19M058878.
HGNCi HGNC:25164. ZNF837.
HPAi HPA042833.
neXtProti NX_Q96EG3.
PharmGKBi PA162410789.
GenAtlasi Search...

Phylogenomic databases

eggNOGi COG5048.
HOGENOMi HOG000234617.
InParanoidi Q96EG3.
OMAi LYACDEC.
OrthoDBi EOG7KSX7Q.
PhylomeDBi Q96EG3.
TreeFami TF337005.

Miscellaneous databases

GenomeRNAii 116412.
NextBioi 79901.
PROi Q96EG3.

Gene expression databases

Bgeei Q96EG3.
CleanExi HS_ZNF837.
Genevestigatori Q96EG3.

Family and domain databases

Gene3Di 3.30.160.60. 8 hits.
InterProi IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
SMARTi SM00355. ZnF_C2H2. 8 hits.
[Graphical view ]
PROSITEi PS00028. ZINC_FINGER_C2H2_1. 8 hits.
PS50157. ZINC_FINGER_C2H2_2. 8 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: B-cell.

Entry informationi

Entry nameiZN837_HUMAN
AccessioniPrimary (citable) accession number: Q96EG3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: September 19, 2006
Last modified: July 9, 2014
This is version 97 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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