Q96DT5 (DYH11_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 29, 2013.
Version 108.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Dynein heavy chain 11, axonemal Alternative name(s): Axonemal beta dynein heavy chain 11 Ciliary dynein heavy chain 11 | ||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 4523 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. |
| Subunit structure | Consists of at least two heavy chains and a number of intermediate and light chains. |
| Subcellular location | |
| Domain | Dynein heavy chains probably consist of an N-terminal stem (which binds cargo and interacts with other dynein components), and the head or motor domain. The motor contains six tandemly-linked AAA domains in the head, which form a ring. A stalk-like structure (formed by two of the coiled coil domains) protrudes between AAA 4 and AAA 5 and terminates in a microtubule-binding site. A seventh domain may also contribute to this ring; it is not clear whether the N-terminus or the C-terminus forms this extra domain. There are four well-conserved and two non-conserved ATPase sites, one per AAA domain. Probably only one of these (within AAA 1) actually hydrolyzes ATP, the others may serve a regulatory function. |
| Involvement in disease | Kartagener syndrome (KTGS) [MIM:244400]: An autosomal recessive disorder characterized by the association of primary ciliary dyskinesia with situs inversus. Clinical features include recurrent respiratory infections, bronchiectasis, infertility, and lateral transposition of the viscera of the thorax and abdomen. The situs inversus is most often total, although it can be partial in some cases (isolated dextrocardia or isolated transposition of abdominal viscera). Primary ciliary dyskinesia 7 (CILD7) [MIM:611884]: A disorder characterized by abnormalities of motile cilia. Respiratory infections leading to chronic inflammation and bronchiectasis are recurrent, due to defects in the respiratory cilia; reduced fertility is often observed in male patients due to abnormalities of sperm tails. Half of the patients exhibit randomization of left-right body asymmetry and situs inversus, due to dysfunction of monocilia at the embryonic node. Primary ciliary dyskinesia associated with situs inversus is referred to as Kartagener syndrome. |
| Sequence similarities | Belongs to the dynein heavy chain family. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 4523 | 4523 | Dynein heavy chain 11, axonemal | PRO_0000114633 | |||||
Regions | |||||||||
| Nucleotide binding | 1900 – 1907 | 8 | ATP Potential | ||||||
| Nucleotide binding | 2181 – 2188 | 8 | ATP Potential | ||||||
| Nucleotide binding | 2517 – 2524 | 8 | ATP Potential | ||||||
| Nucleotide binding | 2862 – 2869 | 8 | ATP Potential | ||||||
| Region | 1 – 1861 | 1861 | Stem By similarity | ||||||
| Region | 1862 – 2083 | 222 | AAA 1 By similarity | ||||||
| Region | 2143 – 2373 | 231 | AAA 2 By similarity | ||||||
| Region | 2479 – 2726 | 248 | AAA 3 By similarity | ||||||
| Region | 2824 – 3073 | 250 | AAA 4 By similarity | ||||||
| Region | 3079 – 3410 | 332 | Stalk By similarity | ||||||
| Region | 3466 – 3693 | 228 | AAA 5 By similarity | ||||||
| Region | 3903 – 4129 | 227 | AAA 6 By similarity | ||||||
| Coiled coil | 1274 – 1327 | 54 | Potential | ||||||
| Coiled coil | 3079 – 3143 | 65 | Potential | ||||||
| Coiled coil | 3319 – 3410 | 92 | Potential | ||||||
| Coiled coil | 3675 – 3710 | 36 | Potential | ||||||
Natural variations | |||||||||
| Natural variant | 34 | 1 | E → L Requires 2 nucleotide substitutions. Ref.1 | VAR_013851 | |||||
| Natural variant | 34 | 1 | E → V. Corresponds to variant rs2285944 [ dbSNP | Ensembl ]. | VAR_042944 | |||||
| Natural variant | 639 | 1 | Q → R. Ref.1 Corresponds to variant rs12670130 [ dbSNP | Ensembl ]. | VAR_013852 | |||||
| Natural variant | 654 | 1 | S → C. Ref.1 | VAR_013853 | |||||
| Natural variant | 1023 | 1 | V → A. Ref.1 Ref.4 Corresponds to variant rs10269582 [ dbSNP | Ensembl ]. | VAR_013854 | |||||
| Natural variant | 1038 | 1 | T → A. Ref.1 Ref.4 Corresponds to variant rs10224537 [ dbSNP | Ensembl ]. | VAR_013855 | |||||
| Natural variant | 1316 | 1 | M → V. Corresponds to variant rs17144788 [ dbSNP | Ensembl ]. | VAR_042945 | |||||
| Natural variant | 1640 | 1 | D → G. Ref.1 Corresponds to variant rs17144835 [ dbSNP | Ensembl ]. | VAR_013856 | |||||
| Natural variant | 2593 | 1 | Y → H. Corresponds to variant rs2003417 [ dbSNP | Ensembl ]. | VAR_060141 | |||||
| Natural variant | 2641 | 1 | S → N. Ref.1 Ref.4 Corresponds to variant rs9639393 [ dbSNP | Ensembl ]. | VAR_013857 | |||||
| Natural variant | 2682 | 1 | I → V. | VAR_013858 | |||||
| Natural variant | 3004 | 1 | R → Q in CILD7; not proven to be pathogenic. Ref.1 Corresponds to variant rs35865357 [ dbSNP | Ensembl ]. | VAR_013859 | |||||
| Natural variant | 3474 | 1 | A → T. Ref.1 Corresponds to variant rs2214326 [ dbSNP | Ensembl ]. | VAR_013860 | |||||
| Natural variant | 3715 | 1 | L → V. Ref.1 Ref.4 Corresponds to variant rs4722064 [ dbSNP | Ensembl ]. | VAR_013861 | |||||
| Natural variant | 3765 | 1 | S → P. Ref.1 Corresponds to variant rs17145720 [ dbSNP | Ensembl ]. | VAR_013862 | |||||
| Natural variant | 4172 | 1 | M → V. Ref.1 Ref.4 Corresponds to variant rs6461613 [ dbSNP | Ensembl ]. | VAR_042946 | |||||
| Natural variant | 4177 | 1 | T → I. Ref.1 Ref.4 Corresponds to variant rs12537531 [ dbSNP | Ensembl ]. | VAR_013863 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Mutations in the DNAH11 (axonemal heavy chain dynein type 11) gene cause one form of situs inversus totalis and most likely primary ciliary dyskinesia." Bartoloni L., Blouin J.-L., Pan Y., Gehrig C., Maiti A.K., Scamuffa N., Rossier C., Jorissen M., Armengot M., Meeks M., Mitchison H.M., Chung E.M.K., Delozier-Blanchet C.D., Craigen W.J., Antonarakis S.E. Proc. Natl. Acad. Sci. U.S.A. 99:10282-10286(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], INVOLVEMENT IN KTGS, VARIANT CILD7 GLN-3004, VARIANTS LEU-34; ARG-639; CYS-654; ALA-1023; ALA-1038; GLY-1640; ASN-2641; THR-3474; VAL-3715; PRO-3765; VAL-4172 AND ILE-4177. Tissue: Nasal epithelium and Testis. |
| [2] | "The DNA sequence of human chromosome 7." Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L. Wilson R.K.Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "Chromosomal localization of human dynein heavy chain genes." Maiti A.K., Mattei M.-G., Jorissen M., Volz A., Ziegler A., Bouvagnet P. Submitted (JAN-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1904-2004. Tissue: Nasal polyp. |
| [4] | "Primary ciliary dyskinesia associated with normal axoneme ultrastructure is caused by DNAH11 mutations." Schwabe G.C., Hoffmann K., Loges N.T., Birker D., Rossier C., de Santi M.M., Olbrich H., Fliegauf M., Failly M., Liebers U., Collura M., Gaedicke G., Mundlos S., Wahn U., Blouin J.-L., Niggemann B., Omran H., Antonarakis S.E., Bartoloni L. Hum. Mutat. 29:289-298(2008) [PubMed] [Europe PMC] [Abstract] Cited for: INVOLVEMENT IN CILD7, INVOLVEMENT IN KTGS, VARIANTS ALA-1023; ALA-1038; ASN-2641; VAL-3715; VAL-4172 AND ILE-4177. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AJ320497 mRNA. Translation: CAC60121.1. AC004595 Genomic DNA. No translation available. AC102952 Genomic DNA. No translation available. AC073102 Genomic DNA. No translation available. AC013481 Genomic DNA. No translation available. AC005078 Genomic DNA. No translation available. AC004002 Genomic DNA. No translation available. AC099653 Genomic DNA. No translation available. AJ132087 mRNA. Translation: CAA10560.1. |
| IPI | IPI00335711. |
| RefSeq | NP_001264044.1. NM_001277115.1. |
| UniGene | Hs.520245. Hs.744069. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 9606.ENSP00000387188. |
PTM databases | |
| PhosphoSite | Q96DT5. |
Polymorphism databases | |
| DMDM | 311033455. |
Proteomic databases | |
| PaxDb | Q96DT5. |
| PRIDE | Q96DT5. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000328843; ENSP00000330671; ENSG00000105877. |
| GeneID | 8701. |
| KEGG | hsa:8701. |
Organism-specific databases | |
| CTD | 8701. |
| GeneCards | GC07P021582. |
| H-InvDB | HIX0006509. HIX0167830. |
| HGNC | HGNC:2942. DNAH11. |
| HPA | HPA045880. |
| MIM | 244400. phenotype. 603339. gene. 611884. phenotype. |
| neXtProt | NX_Q96DT5. |
| Orphanet | 244. Primary ciliary dyskinesia. 98861. Primary ciliary dyskinesia, Kartagener type. |
| PharmGKB | PA27396. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG5245. |
| HOGENOM | HOG000237309. |
| HOVERGEN | HBG107831. |
Gene expression databases | |
| ArrayExpress | Q96DT5. |
| Bgee | Q96DT5. |
| CleanEx | HS_DNAH11. |
| Genevestigator | Q96DT5. |
| GermOnline | ENSG00000105877. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR003593. AAA+_ATPase. IPR011704. ATPase_dyneun-rel_AAA. IPR026983. DHC_fam. IPR024743. Dynein_HC_stalk. IPR024317. Dynein_heavy_chain_D4_dom. IPR004273. Dynein_heavy_dom. IPR013594. Dynein_heavy_dom-1. IPR013602. Dynein_heavy_dom-2. IPR027417. P-loop_NTPase. [Graphical view] |
| PANTHER | PTHR10676. PTHR10676. 1 hit. |
| Pfam | PF07728. AAA_5. 1 hit. PF12780. AAA_8. 1 hit. PF08385. DHC_N1. 1 hit. PF08393. DHC_N2. 1 hit. PF03028. Dynein_heavy. 1 hit. PF12777. MT. 1 hit. [Graphical view] |
| SMART | SM00382. AAA. 4 hits. [Graphical view] |
| SUPFAM | SSF52540. SSF52540. 4 hits. |
| ProtoNet | Search... |
Other | |
| ChiTaRS | DNAH11. human. |
| GenomeRNAi | 8701. |
| NextBio | 32621. |
| SOURCE | Search... |
Entry information
| Entry name | DYH11_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q96DT5 Secondary accession number(s): Q9UJ82 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 7 Human chromosome 7: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
