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Reviewed, UniProtKB/Swiss-Prot Q96D31 (CRCM1_HUMAN)

Last modified October 13, 2009. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (5) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Web resources · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Calcium release-activated calcium channel protein 1
Alternative name(s):
    Protein orai-1
    Transmembrane protein 142A
Gene names
Name: ORAI1
Synonyms: CRACM1, TMEM142A
OrganismHomo sapiens (Human) [Complete proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length301 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Function

Ca2+ release-activated Ca2+ (CRAC) channel subunit which mediates Ca2+ influx following depletion of intracellular Ca2+ stores and channel activation by the Ca2+ sensor, STIM1. CRAC channels are the main pathway for Ca2+ influx in T-cells and promote the immune response to pathogens by activating the transcription factor NFAT. Ref.4 Ref.5 Ref.6 Ref.7 Ref.10

Subunit structure

Interacts with STIM1 and STIM2. Ref.8

Subcellular location

Cell membrane; Multi-pass membrane protein. Ref.7 Ref.10

Involvement in disease

Defects in ORAI1 are a cause of severe combined immunodeficiency with CRAC channel dysfunction (CRAC-SCID) [MIM:610277]. SCID refers to a genetically and clinically heterogeneous group of rare congenital disorders characterized by impairment of both humoral and cell-mediated immunity, leukopenia, and low or absent antibody levels. Patients with SCID present in infancy with recurrent, persistent infections by opportunistic organisms. The common characteristic of all types of SCID is absence of T-cell-mediated cellular immunity due to a defect in T-cell development. Ref.10 Ref.3

Miscellaneous

In Greek mythology, the 'Orai' are the keepers of the gates of heaven: Eunomia (order or harmony), Dike (justice) and Eirene (peace).

Sequence similarities

Belongs to the Orai family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 301301Calcium release-activated calcium channel protein 1
PRO_0000234381

Regions

Topological domain1 – 8787Cytoplasmic Potential
Transmembrane88 – 10518 Potential
Topological domain106 – 11914Extracellular Potential
Transmembrane120 – 14021 Potential
Topological domain141 – 17333Cytoplasmic Potential
Transmembrane174 – 19421 Potential
Topological domain195 – 23440Extracellular Potential
Transmembrane235 – 25521 Potential
Topological domain256 – 30146Cytoplasmic Potential
Compositional bias3 – 4745Pro-rich

Amino acid modifications

Modified residue2951Phosphothreonine Ref.9
Modified residue2981Phosphoserine Ref.9
Glycosylation2231N-linked (GlcNAc...) Potential

Natural variations

Natural variant911R → W in CRAC-SCID. Ref.10
VAR_026226
Natural variant2181S → G: dbSNP rs3741596. Ref.1 Ref.2
VAR_038608

Experimental info

Sequence conflict2551V → F in BAB55068. Ref.2

Sequences

Sequence LengthMass (Da)Tools
Q96D31-1 [UniParc].

Last modified May 16, 2006. Version 2.
Checksum: F85F7C06F36628D4

FASTA30132,668
        10         20         30         40         50         60 
MHPEPAPPPS RSSPELPPSG GSTTSGSRRS RRRSGDGEPP GAPPPPPSAV TYPDWIGQSY 

        70         80         90        100        110        120 
SEVMSLNEHS MQALSWRKLY LSRAKLKASS RTSALLSGFA MVAMVEVQLD ADHDYPPGLL 

       130        140        150        160        170        180 
IAFSACTTVL VAVHLFALMI STCILPNIEA VSNVHNLNSV KESPHERMHR HIELAWAFST 

       190        200        210        220        230        240 
VIGTLLFLAE VVLLCWVKFL PLKKQPGQPR PTSKPPASGA AANVSTSGIT PGQAAAIAST 

       250        260        270        280        290        300 
TIMVPFGLIF IVFAVHFYRS LVSHKTDRQF QELNELAEFA RLQDQLDHRG DHPLTPGSHY 


A 

« Hide

References

« Hide 'large scale' references
[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT GLY-218.
Tissue: Bone marrow, Ovary, Prostate and Uterus.
[2]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 22-301, VARIANT GLY-218.
Tissue: Mammary gland.
[3]"A severe defect in CRAC Ca2+ channel activation and altered K+ channel gating in T cells from immunodeficient patients."
Feske S., Prakriya M., Rao A., Lewis R.S.
J. Exp. Med. 202:651-662(2005) [PubMed: 16147976] [Abstract]
Cited for: INVOLVEMENT IN CRAC-SCID.
[4]"Orai1 and STIM reconstitute store-operated calcium channel function."
Soboloff J., Spassova M.A., Tang X.D., Hewavitharana T., Xu W., Gill D.L.
J. Biol. Chem. 281:20661-20665(2006) [PubMed: 16766533] [Abstract]
Cited for: FUNCTION.
[5]"Large store-operated calcium selective currents due to co-expression of Orai1 or Orai2 with the intracellular calcium sensor, Stim1."
Mercer J.C., Dehaven W.I., Smyth J.T., Wedel B., Boyles R.R., Bird G.S., Putney J.W. Jr.
J. Biol. Chem. 281:24979-24990(2006) [PubMed: 16807233] [Abstract]
Cited for: FUNCTION.
[6]"Amplification of CRAC current by STIM1 and CRACM1 (Orai1)."
Peinelt C., Vig M., Koomoa D.L., Beck A., Nadler M.J.S., Koblan-Huberson M., Lis A., Fleig A., Penner R., Kinet J.-P.
Nat. Cell Biol. 8:771-773(2006) [PubMed: 16733527] [Abstract]
Cited for: FUNCTION.
[7]"CRACM1 is a plasma membrane protein essential for store-operated Ca2+ entry."
Vig M., Peinelt C., Beck A., Koomoa D.L., Rabah D., Koblan-Huberson M., Kraft S., Turner H., Fleig A., Penner R., Kinet J.-P.
Science 312:1220-1223(2006) [PubMed: 16645049] [Abstract]
Cited for: FUNCTION, SUBCELLULAR LOCATION.
[8]"STIM2 protein mediates distinct store-dependent and store-independent modes of CRAC channel activation."
Parvez S., Beck A., Peinelt C., Soboloff J., Lis A., Monteilh-Zoller M., Gill D.L., Fleig A., Penner R.
FASEB J. 22:752-761(2008) [PubMed: 17905723] [Abstract]
Cited for: INTERACTION WITH STIM1 AND STIM2.
[9]"A quantitative atlas of mitotic phosphorylation."
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P.
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-295 AND SER-298, MASS SPECTROMETRY.
[10]"A mutation in Orai1 causes immune deficiency by abrogating CRAC channel function."
Feske S., Gwack Y., Prakriya M., Srikanth S., Puppel S.-H., Tanasa B., Hogan P.G., Lewis R.S., Daly M., Rao A.
Nature 441:179-185(2006) [PubMed: 16582901] [Abstract]
Cited for: VARIANT CRAC-SCID TRP-91, SUBCELLULAR LOCATION, FUNCTION.
+Additional computationally mapped references.

Web resources

ORAI1base

ORAI1 mutation db

Cross-references

Sequence databases

BC013386 mRNA. Translation: AAH13386.1. Different initiation.
BC015369 mRNA. Translation: AAH15369.2.
BC075831 mRNA. Translation: AAH75831.1.
BC104633 mRNA. Translation: AAI04634.1. Different initiation.
AK027372 mRNA. Translation: BAB55068.1. Different initiation.
IPIIPI00303699.
RefSeqNP_116179.2.
UniGeneHs.55148

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ96D31.

Protein family/group databases

TCDB1.A.52.1.1. Ca2+ release-activated Ca2+ (CRAC) channel (CRAC-C) family.

PTM databases

PhosphoSiteQ96D31.

Proteomic databases

PRIDEQ96D31.

Genome annotation databases

EnsemblENST00000330079; ENSP00000328216; ENSG00000182500; Homo sapiens. [Genome view]
GeneID84876.
KEGGhsa:84876.
UCSCuc009zxg.1. human.

Organism-specific databases

CTD84876.
GeneCardsGC12P120550.
HGNCHGNC:25896. ORAI1.
HPAHPA016583.
MIM610277. gene+phenotype.
GenAtlasSearch...

Phylogenomic databases

HOGENOMQ96D31.
HOVERGENQ96D31.

Enzyme and pathway databases

Pathway_Interaction_DBtcrpathway. TCR signaling in naive CD4+ T cells.
cd8tcrpathway. TCR signaling in naive CD8+ T cells.

Gene expression databases

ArrayExpressQ96D31.
BgeeQ96D31.
CleanExHS_ORAI1.
GenevestigatorQ96D31.
GermOnlineENSG00000182500. Homo sapiens.

Family and domain databases

InterProIPR012446. DUF1650.
[Graphical view]
PfamPF07856. DUF1650. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio75181.
SOURCESearch...

Entry information

Entry nameCRCM1_HUMAN
AccessionPrimary (citable) accession number: Q96D31
Secondary accession number(s): Q3MHV3 expand/collapse secondary AC list , Q6DHX2, Q96BP7, Q96K71
Entry history
Integrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: May 16, 2006
Last modified: October 13, 2009
This is version 48 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 12

Human chromosome 12: entries, gene names and cross-references to MIM

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Web resources · Cross-references · Entry information · Relevant documents