Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative uncharacterized protein C8orf44

Gene

C8orf44

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein C8orf44
Gene namesi
Name:C8orf44
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome 8

Organism-specific databases

HGNCiHGNC:25646. C8orf44.

Subcellular locationi

GO - Cellular componenti

  1. nucleoplasm Source: HPA
Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA142672363.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 159159Putative uncharacterized protein C8orf44PRO_0000279417Add
BLAST

Proteomic databases

PaxDbiQ96CB5.
PRIDEiQ96CB5.

PTM databases

PhosphoSiteiQ96CB5.

Expressioni

Gene expression databases

BgeeiQ96CB5.
CleanExiHS_C8orf44.
ExpressionAtlasiQ96CB5. baseline and differential.
GenevestigatoriQ96CB5.

Organism-specific databases

HPAiHPA043660.
HPA054753.

Structurei

3D structure databases

ProteinModelPortaliQ96CB5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG72508.
GeneTreeiENSGT00570000079469.
HOGENOMiHOG000172428.
InParanoidiQ96CB5.
OMAiGCVSKRP.
OrthoDBiEOG757D00.
PhylomeDBiQ96CB5.
TreeFamiTF340891.

Sequencei

Sequence statusi: Complete.

Q96CB5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKNESYLNQ PAPPIPIPTL SLMGGCREHF ENHWKGRARW LMPVIPALWE
60 70 80 90 100
AKAGRSPEVR SSKPAWPTWR NPIFTKNTKI SQVLELFLNY QSLICALEKQ
110 120 130 140 150
KRQKGSLAIF CWSFQGGCVS KRPDVPSLKS QKPKRKRITG RKRLSKGFWS

LLFSNLGRF
Length:159
Mass (Da):18,380
Last modified:May 18, 2010 - v2
Checksum:i1895B296E4A57F67
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti131 – 1311Q → R.
Corresponds to variant rs1909534 [ dbSNP | Ensembl ].
VAR_030888
Natural varianti148 – 1481F → S.1 Publication
Corresponds to variant rs1057463 [ dbSNP | Ensembl ].
VAR_030889

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK002129 mRNA. Translation: BAA92096.1.
AC090154 Genomic DNA. No translation available.
BC014448 mRNA. Translation: AAH14448.1.
CCDSiCCDS6193.1.
RefSeqiNP_062553.1. NM_019607.2.
UniGeneiHs.661238.

Genome annotation databases

EnsembliENST00000390159; ENSP00000375087; ENSG00000213865.
ENST00000519561; ENSP00000428002; ENSG00000213865.
GeneIDi56260.
KEGGihsa:56260.
UCSCiuc003xwo.2. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK002129 mRNA. Translation: BAA92096.1.
AC090154 Genomic DNA. No translation available.
BC014448 mRNA. Translation: AAH14448.1.
CCDSiCCDS6193.1.
RefSeqiNP_062553.1. NM_019607.2.
UniGeneiHs.661238.

3D structure databases

ProteinModelPortaliQ96CB5.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSiteiQ96CB5.

Proteomic databases

PaxDbiQ96CB5.
PRIDEiQ96CB5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000390159; ENSP00000375087; ENSG00000213865.
ENST00000519561; ENSP00000428002; ENSG00000213865.
GeneIDi56260.
KEGGihsa:56260.
UCSCiuc003xwo.2. human.

Organism-specific databases

CTDi56260.
GeneCardsiGC08P067588.
HGNCiHGNC:25646. C8orf44.
HPAiHPA043660.
HPA054753.
neXtProtiNX_Q96CB5.
PharmGKBiPA142672363.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG72508.
GeneTreeiENSGT00570000079469.
HOGENOMiHOG000172428.
InParanoidiQ96CB5.
OMAiGCVSKRP.
OrthoDBiEOG757D00.
PhylomeDBiQ96CB5.
TreeFamiTF340891.

Miscellaneous databases

ChiTaRSiC8orf44. human.
GenomeRNAii56260.
NextBioi61913.

Gene expression databases

BgeeiQ96CB5.
CleanExiHS_C8orf44.
ExpressionAtlasiQ96CB5. baseline and differential.
GenevestigatoriQ96CB5.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Placenta.
  2. "DNA sequence and analysis of human chromosome 8."
    Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Allen N.R., Anderson S., Asakawa T.
    , Blechschmidt K., Bloom T., Borowsky M.L., Butler J., Cook A., Corum B., DeArellano K., DeCaprio D., Dooley K.T., Dorris L. III, Engels R., Gloeckner G., Hafez N., Hagopian D.S., Hall J.L., Ishikawa S.K., Jaffe D.B., Kamat A., Kudoh J., Lehmann R., Lokitsang T., Macdonald P., Major J.E., Matthews C.D., Mauceli E., Menzel U., Mihalev A.H., Minoshima S., Murayama Y., Naylor J.W., Nicol R., Nguyen C., O'Leary S.B., O'Neill K., Parker S.C.J., Polley A., Raymond C.K., Reichwald K., Rodriguez J., Sasaki T., Schilhabel M., Siddiqui R., Smith C.L., Sneddon T.P., Talamas J.A., Tenzin P., Topham K., Venkataraman V., Wen G., Yamazaki S., Young S.K., Zeng Q., Zimmer A.R., Rosenthal A., Birren B.W., Platzer M., Shimizu N., Lander E.S.
    Nature 439:331-335(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT SER-148.
    Tissue: Pancreas.

Entry informationi

Entry nameiCH044_HUMAN
AccessioniPrimary (citable) accession number: Q96CB5
Secondary accession number(s): Q9NUM6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 6, 2007
Last sequence update: May 18, 2010
Last modified: February 4, 2015
This is version 78 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 8
    Human chromosome 8: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.