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Q96CB5

- CH044_HUMAN

UniProt

Q96CB5 - CH044_HUMAN

Protein

Putative uncharacterized protein C8orf44

Gene

C8orf44

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 2 (18 May 2010)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative uncharacterized protein C8orf44
    Gene namesi
    Name:C8orf44
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 8

    Organism-specific databases

    HGNCiHGNC:25646. C8orf44.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: HPA

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA142672363.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 159159Putative uncharacterized protein C8orf44PRO_0000279417Add
    BLAST

    Proteomic databases

    PaxDbiQ96CB5.
    PRIDEiQ96CB5.

    PTM databases

    PhosphoSiteiQ96CB5.

    Expressioni

    Gene expression databases

    ArrayExpressiQ96CB5.
    BgeeiQ96CB5.
    CleanExiHS_C8orf44.
    GenevestigatoriQ96CB5.

    Organism-specific databases

    HPAiHPA043660.
    HPA054753.

    Structurei

    3D structure databases

    ProteinModelPortaliQ96CB5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG72508.
    HOGENOMiHOG000172428.
    InParanoidiQ96CB5.
    OMAiGCVSKRP.
    OrthoDBiEOG757D00.
    PhylomeDBiQ96CB5.
    TreeFamiTF340891.

    Sequencei

    Sequence statusi: Complete.

    Q96CB5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRKNESYLNQ PAPPIPIPTL SLMGGCREHF ENHWKGRARW LMPVIPALWE    50
    AKAGRSPEVR SSKPAWPTWR NPIFTKNTKI SQVLELFLNY QSLICALEKQ 100
    KRQKGSLAIF CWSFQGGCVS KRPDVPSLKS QKPKRKRITG RKRLSKGFWS 150
    LLFSNLGRF 159
    Length:159
    Mass (Da):18,380
    Last modified:May 18, 2010 - v2
    Checksum:i1895B296E4A57F67
    GO

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti131 – 1311Q → R.
    Corresponds to variant rs1909534 [ dbSNP | Ensembl ].
    VAR_030888
    Natural varianti148 – 1481F → S.1 Publication
    Corresponds to variant rs1057463 [ dbSNP | Ensembl ].
    VAR_030889

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK002129 mRNA. Translation: BAA92096.1.
    AC090154 Genomic DNA. No translation available.
    BC014448 mRNA. Translation: AAH14448.1.
    CCDSiCCDS6193.1.
    RefSeqiNP_062553.1. NM_019607.2.
    UniGeneiHs.661238.

    Genome annotation databases

    EnsembliENST00000390159; ENSP00000375087; ENSG00000213865.
    ENST00000519561; ENSP00000428002; ENSG00000213865.
    GeneIDi56260.
    KEGGihsa:56260.
    UCSCiuc003xwo.2. human.

    Keywords - Coding sequence diversityi

    Polymorphism

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK002129 mRNA. Translation: BAA92096.1 .
    AC090154 Genomic DNA. No translation available.
    BC014448 mRNA. Translation: AAH14448.1 .
    CCDSi CCDS6193.1.
    RefSeqi NP_062553.1. NM_019607.2.
    UniGenei Hs.661238.

    3D structure databases

    ProteinModelPortali Q96CB5.
    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei Q96CB5.

    Proteomic databases

    PaxDbi Q96CB5.
    PRIDEi Q96CB5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000390159 ; ENSP00000375087 ; ENSG00000213865 .
    ENST00000519561 ; ENSP00000428002 ; ENSG00000213865 .
    GeneIDi 56260.
    KEGGi hsa:56260.
    UCSCi uc003xwo.2. human.

    Organism-specific databases

    CTDi 56260.
    GeneCardsi GC08P067588.
    HGNCi HGNC:25646. C8orf44.
    HPAi HPA043660.
    HPA054753.
    neXtProti NX_Q96CB5.
    PharmGKBi PA142672363.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG72508.
    HOGENOMi HOG000172428.
    InParanoidi Q96CB5.
    OMAi GCVSKRP.
    OrthoDBi EOG757D00.
    PhylomeDBi Q96CB5.
    TreeFami TF340891.

    Miscellaneous databases

    GenomeRNAii 56260.
    NextBioi 61913.

    Gene expression databases

    ArrayExpressi Q96CB5.
    Bgeei Q96CB5.
    CleanExi HS_C8orf44.
    Genevestigatori Q96CB5.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Placenta.
    2. "DNA sequence and analysis of human chromosome 8."
      Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Allen N.R., Anderson S., Asakawa T.
      , Blechschmidt K., Bloom T., Borowsky M.L., Butler J., Cook A., Corum B., DeArellano K., DeCaprio D., Dooley K.T., Dorris L. III, Engels R., Gloeckner G., Hafez N., Hagopian D.S., Hall J.L., Ishikawa S.K., Jaffe D.B., Kamat A., Kudoh J., Lehmann R., Lokitsang T., Macdonald P., Major J.E., Matthews C.D., Mauceli E., Menzel U., Mihalev A.H., Minoshima S., Murayama Y., Naylor J.W., Nicol R., Nguyen C., O'Leary S.B., O'Neill K., Parker S.C.J., Polley A., Raymond C.K., Reichwald K., Rodriguez J., Sasaki T., Schilhabel M., Siddiqui R., Smith C.L., Sneddon T.P., Talamas J.A., Tenzin P., Topham K., Venkataraman V., Wen G., Yamazaki S., Young S.K., Zeng Q., Zimmer A.R., Rosenthal A., Birren B.W., Platzer M., Shimizu N., Lander E.S.
      Nature 439:331-335(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT SER-148.
      Tissue: Pancreas.

    Entry informationi

    Entry nameiCH044_HUMAN
    AccessioniPrimary (citable) accession number: Q96CB5
    Secondary accession number(s): Q9NUM6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 6, 2007
    Last sequence update: May 18, 2010
    Last modified: October 1, 2014
    This is version 74 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 8
      Human chromosome 8: entries, gene names and cross-references to MIM
    2. Human entries with polymorphisms or disease mutations
      List of human entries with polymorphisms or disease mutations
    3. Human polymorphisms and disease mutations
      Index of human polymorphisms and disease mutations

    External Data

    Dasty 3