Q96BY6 (DOC10_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 109.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Dedicator of cytokinesis protein 10 Alternative name(s): Zizimin-3 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 2186 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Potential guanine nucleotide exchange factor (GEF). GEF proteins activate some small GTPases by exchanging bound GDP for free GTP. |
| Tissue specificity | Expressed at low level in brain and lung. Ref.1 |
| Domain | The DHR-2 domain may mediate some GEF activity By similarity. |
| Sequence similarities | Belongs to the DOCK family. Contains 1 DHR-1 domain. Contains 1 DHR-2 domain. Contains 1 PH domain. |
| Sequence caution | The sequence AAH15018.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence BAA31669.2 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. The sequence BAA91022.1 differs from that shown. Reason: Frameshift at position 2133. The sequence BAA91583.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing |
| Molecular function | Guanine-nucleotide releasing factor |
| PTM | Acetylation Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | small GTPase mediated signal transduction Inferred from electronic annotation. Source: InterPro |
| Molecular_function | Rho guanyl-nucleotide exchange factor activity Inferred from electronic annotation. Source: Compara phospholipid bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q96BY6-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 2 (identifier: Q96BY6-2) The sequence of this isoform differs from the canonical sequence as follows: 565-593: FKDNQGNVDRDSRFSPLFRQESSKISTED → DSCSQQTRNTFNGGIGSFSFERFCVAYYF 594-2186: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2186 | 2186 | Dedicator of cytokinesis protein 10 | PRO_0000190002 | |||||
Regions | |||||||||
| Domain | 181 – 290 | 110 | PH | ||||||
| Domain | 672 – 850 | 179 | DHR-1 | ||||||
| Domain | 1690 – 2150 | 461 | DHR-2 | ||||||
Amino acid modifications | |||||||||
| Modified residue | 834 | 1 | N6-acetyllysine Ref.10 | ||||||
| Modified residue | 1232 | 1 | Phosphoserine Ref.9 | ||||||
| Modified residue | 1292 | 1 | Phosphoserine Ref.7 Ref.8 Ref.9 | ||||||
| Modified residue | 1295 | 1 | Phosphoserine Ref.7 Ref.8 Ref.9 | ||||||
| Modified residue | 1318 | 1 | Phosphoserine Ref.7 Ref.9 | ||||||
| Modified residue | 1440 | 1 | Phosphothreonine Ref.9 | ||||||
Natural variations | |||||||||
| Alternative sequence | 565 – 593 | 29 | FKDNQ…ISTED → DSCSQQTRNTFNGGIGSFSF ERFCVAYYF in isoform 2. | VSP_007716 | |||||
| Alternative sequence | 594 – 2186 | 1593 | Missing in isoform 2. | VSP_007717 | |||||
Experimental info | |||||||||
| Sequence conflict | 563 | 1 | S → Y in BAA31669. Ref.1 | ||||||
| Sequence conflict | 1833 | 1 | N → D in BAA91583. Ref.5 | ||||||
| Sequence conflict | 1966 | 1 | T → S in BAA91022. Ref.5 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro." Ishikawa K., Nagase T., Suyama M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. DNA Res. 5:169-176(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), TISSUE SPECIFICITY. Tissue: Brain. |
| [2] | "Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones." Nakajima D., Okazaki N., Yamakawa H., Kikuno R., Ohara O., Nagase T. DNA Res. 9:99-106(2002) [PubMed] [Europe PMC] [Abstract] Cited for: SEQUENCE REVISION. |
| [3] | "Generation and annotation of the DNA sequences of human chromosomes 2 and 4." Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H. Wilson R.K.Nature 434:724-731(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1599-2186 (ISOFORM 1). Tissue: Skin. |
| [5] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1599-2186 (ISOFORM 1). Tissue: Colon mucosa and Teratocarcinoma. |
| [6] | "Identification of an evolutionarily conserved superfamily of DOCK180-related proteins with guanine nucleotide exchange activity." Cote J.-F., Vuori K. J. Cell Sci. 115:4901-4913(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NOMENCLATURE. |
| [7] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1292; SER-1295 AND SER-1318, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "Phosphoproteome of resting human platelets." Zahedi R.P., Lewandrowski U., Wiesner J., Wortelkamp S., Moebius J., Schuetz C., Walter U., Gambaryan S., Sickmann A. J. Proteome Res. 7:526-534(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1292 AND SER-1295, MASS SPECTROMETRY. Tissue: Platelet. |
| [9] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1232; SER-1292; SER-1295; SER-1318 AND THR-1440, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [10] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed] [Europe PMC] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-834, MASS SPECTROMETRY. |
| [11] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB014594 mRNA. Translation: BAA31669.2. Different initiation. AC011739 Genomic DNA. No translation available. AC017095 Genomic DNA. No translation available. AC093806 Genomic DNA. No translation available. BC015018 mRNA. Translation: AAH15018.1. Different initiation. AK000227 mRNA. Translation: BAA91022.1. Frameshift. AK001253 mRNA. Translation: BAA91583.1. Different initiation. |
| IPI | IPI00333770. IPI00375113. |
| RefSeq | NP_055504.2. NM_014689.2. |
| UniGene | Hs.46578. |
3D structure databases | |
| ProteinModelPortal | Q96BY6. |
| SMR | Q96BY6. Positions 181-302, 1694-2149. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q96BY6. 1 interaction. |
| STRING | 9606.ENSP00000258390. |
PTM databases | |
| PhosphoSite | Q96BY6. |
Polymorphism databases | |
| DMDM | 32469767. |
Proteomic databases | |
| PaxDb | Q96BY6. |
| PRIDE | Q96BY6. |
Protocols and materials databases | |
| DNASU | 55619. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000258390; ENSP00000258390; ENSG00000135905. |
| GeneID | 55619. |
| KEGG | hsa:55619. |
| UCSC | uc002vod.1. human. uc010fwz.1. human. |
Organism-specific databases | |
| CTD | 55619. |
| GeneCards | GC02M225593. |
| H-InvDB | HIX0002889. |
| HGNC | HGNC:23479. DOCK10. |
| HPA | HPA035749. |
| MIM | 611518. gene. |
| neXtProt | NX_Q96BY6. |
| PharmGKB | PA134983197. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG242127. |
| HOGENOM | HOG000231373. |
| HOVERGEN | HBG107819. |
| OMA | CQYKFDF. |
| OrthoDB | EOG461432. |
| PhylomeDB | Q96BY6. |
Enzyme and pathway databases | |
| Reactome | REACT_604. Hemostasis. |
Gene expression databases | |
| ArrayExpress | Q96BY6. |
| Bgee | Q96BY6. |
| CleanEx | HS_DOCK10. |
| Genevestigator | Q96BY6. |
| GermOnline | ENSG00000135905. Homo sapiens. |
Family and domain databases | |
| Gene3D | 2.30.29.30. 1 hit. |
| InterPro | IPR027007. DHR-1_domain. IPR027357. DHR-2. IPR026791. DOCK. IPR010703. DOCK_C. IPR021816. DOCK_C/D_N. IPR026796. DOCK_D. IPR011993. PH_like_dom. IPR001849. Pleckstrin_homology. [Graphical view] |
| PANTHER | PTHR23317. PTHR23317. 1 hit. PTHR23317:SF26. PTHR23317:SF26. 1 hit. |
| Pfam | PF06920. Ded_cyto. 1 hit. PF14429. DOCK-C2. 1 hit. PF11878. DUF3398. 1 hit. PF00169. PH. 1 hit. [Graphical view] |
| SMART | SM00233. PH. 1 hit. [Graphical view] |
| PROSITE | PS51650. DHR_1. 1 hit. PS51651. DHR_2. 1 hit. PS50003. PH_DOMAIN. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | DOCK10. human. |
| GenomeRNAi | 55619. |
| NextBio | 60216. |
| SOURCE | Search... |
Entry information
| Entry name | DOC10_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q96BY6 Secondary accession number(s): O75178, Q9NW06, Q9NXI8 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 2 Human chromosome 2: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
