Q96BR9 (ZBT8A_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 97.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Zinc finger and BTB domain-containing protein 8A Alternative name(s): BTB/POZ and zinc-finger domain-containing factor BTB/POZ and zinc-finger domains factor on chromosome 1 Short name=BOZ-F1 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 441 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May be involved in transcriptional regulation. |
| Subcellular location | Nucleus Potential. |
| Sequence similarities | Contains 1 BTB (POZ) domain. Contains 2 C2H2-type zinc fingers. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transcription Transcription regulation |
| Cellular component | Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Repeat Zinc-finger |
| Ligand | DNA-binding Metal-binding Zinc |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependentInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | DNA binding Inferred from electronic annotation. Source: UniProtKB-KW zinc ion bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q96BR9-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q96BR9-2) The sequence of this isoform differs from the canonical sequence as follows: 332-441: IHQACKLICR...EEKEIKPNIR → MEIRIPD |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 441 | 441 | Zinc finger and BTB domain-containing protein 8A | PRO_0000378508 | |||||
Regions | |||||||||
| Domain | 24 – 92 | 69 | BTB | ||||||
| Zinc finger | 282 – 304 | 23 | C2H2-type 1 | ||||||
| Zinc finger | 310 – 333 | 24 | C2H2-type 2 | ||||||
| Compositional bias | 429 – 435 | 7 | Poly-Glu | ||||||
Amino acid modifications | |||||||||
| Modified residue | 161 | 1 | Phosphoserine Ref.7 | ||||||
| Modified residue | 167 | 1 | Phosphoserine Ref.6 | ||||||
Natural variations | |||||||||
| Alternative sequence | 332 – 441 | 110 | IHQAC…KPNIR → MEIRIPD in isoform 2. | VSP_037597 | |||||
| Natural variant | 418 | 1 | G → A. Ref.2 Ref.4 Ref.5 Corresponds to variant rs704886 [ dbSNP | Ensembl ]. | VAR_058085 | |||||
Experimental info | |||||||||
| Sequence conflict | 206 | 1 | S → G in AAH15067. Ref.5 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Structure, genomic organization and expression of BOZ-F1." Goudou D., Bitoun M., Perin J.P., Alliel P.M. Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2). Tissue: Brain. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANT ALA-418. Tissue: Embryo. |
| [3] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed: 16710414] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], VARIANT ALA-418. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANT ALA-418. Tissue: Prostate, Skin and Uterus. |
| [6] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-167, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [7] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-161, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF548353 mRNA. Translation: AAN40800.1. AY157873 mRNA. Translation: AAN77376.1. AK074546 mRNA. Translation: BAC11050.1. AL033529 Genomic DNA. Translation: CAI20023.1. AL033529 Genomic DNA. Translation: CAI20024.1. CH471059 Genomic DNA. Translation: EAX07521.1. CH471059 Genomic DNA. Translation: EAX07522.1. BC015067 mRNA. Translation: AAH15067.1. BC015239 mRNA. Translation: AAH15239.1. BC029654 mRNA. Translation: AAH29654.1. |
| IPI | IPI00292615. IPI00787891. |
| RefSeq | NP_001035531.1. NM_001040441.1. |
| UniGene | Hs.546479. |
3D structure databases | |
| HSSP | HSSP built from PDB template 2ADR based on UniProtKB P07248. |
| ProteinModelPortal | Q96BR9. |
| SMR | Q96BR9. Positions 1-119, 249-387. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q96BR9. 19 interactions. |
| MINT | MINT-1471217. |
| STRING | Q96BR9. |
Polymorphism databases | |
| DMDM | 251765171. |
Proteomic databases | |
| PRIDE | Q96BR9. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000373510; ENSP00000362609; ENSG00000160062. |
| GeneID | 653121. |
| KEGG | hsa:653121. |
Organism-specific databases | |
| CTD | 653121. |
| GeneCards | GC01P033004. |
| HGNC | HGNC:24172. ZBTB8A. |
| HPA | HPA031768. |
| neXtProt | NX_Q96BR9. |
| PharmGKB | PA164727627. |
| GenAtlas | Search... |
Phylogenomic databases | |
| GeneTree | ENSGT00600000084004. |
| HOGENOM | HBG716158. |
| OMA | LSSHFRT. |
| OrthoDB | EOG4H9XKF. |
| PhylomeDB | Q96BR9. |
Gene expression databases | |
| ArrayExpress | Q96BR9. |
| Bgee | Q96BR9. |
| Genevestigator | Q96BR9. |
Family and domain databases | |
| InterPro | IPR000210. BTB/POZ-like. IPR011333. BTB/POZ_fold. IPR013069. BTB_POZ. IPR007087. Znf_C2H2. IPR015880. Znf_C2H2-like. IPR013087. Znf_C2H2/integrase_DNA-bd. [Graphical view] |
| Gene3D | G3DSA:3.30.710.10. BTB/POZ_fold. 1 hit. G3DSA:3.30.160.60. Znf_C2H2/integrase_DNA-bd. 2 hits. |
| KO | K10495. |
| Pfam | PF00651. BTB. 1 hit. PF00096. zf-C2H2. 2 hits. [Graphical view] |
| SMART | SM00225. BTB. 1 hit. SM00355. ZnF_C2H2. 2 hits. [Graphical view] |
| SUPFAM | SSF54695. BTB/POZ_fold. 1 hit. |
| PROSITE | PS50097. BTB. 1 hit. PS00028. ZINC_FINGER_C2H2_1. 2 hits. PS50157. ZINC_FINGER_C2H2_2. 2 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 122742. |
Entry information
| Entry name | ZBT8A_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q96BR9 Secondary accession number(s): Q8IUL5 Q96BX0 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with