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Protein
Submitted name:

HNRPU protein

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
HNRPU proteinImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162391486.

PTM / Processingi

Proteomic databases

PaxDbiQ96BA7.
PRIDEiQ96BA7.

Expressioni

Gene expression databases

BgeeiQ96BA7.
GenevisibleiQ96BA7. HS.

Interactioni

Protein-protein interaction databases

MINTiMINT-4992512.
STRINGi9606.ENSP00000283179.

Structurei

3D structure databases

ProteinModelPortaliQ96BA7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini165 – 361197B30.2/SPRYInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili549 – 57224Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IR1W. Eukaryota.
ENOG410Y1WQ. LUCA.
HOVERGENiHBG061101.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR001870. B30.2/SPRY.
IPR013320. ConA-like_dom.
IPR026745. hnRNP_U.
IPR027417. P-loop_NTPase.
IPR003877. SPRY_dom.
[Graphical view]
PANTHERiPTHR12381:SF11. PTHR12381:SF11. 2 hits.
PfamiPF00622. SPRY. 1 hit.
[Graphical view]
SMARTiSM00449. SPRY. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50188. B302_SPRY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q96BA7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELGEENGAA GAADSGPMEE EEAASEDENG DDQGFQEGED ELGDEEEGAG
60 70 80 90 100
DENGHGEQQP QPPATQQQQP QQQRGAAKEA AGKSSGPTSL FAVTVAPPGA
110 120 130 140 150
RQGQQQAGGK KKAEGGGGGG RPGAPAAGDG KTEQKGGDKK RGVKRPREDH
160 170 180 190 200
GRGYFEYIEE NKYSRAKSPQ PPVEEEDEHF DDTVVCLDTY NCDLHFKISR
210 220 230 240 250
DRLSASSLTM ESFAFLWAGG RASYGVSKGK VCFEMKVTEK IPVRHLYTKD
260 270 280 290 300
IDIHEVRIGW SLTTSGMLLG EEEFSYGYSL KGIKTCNCET EDYGEKFDEN
310 320 330 340 350
DVITCFANFE SDEVELSYAK NGQDLGVAFK ISKEVLAGRP LFPHVLCHNC
360 370 380 390 400
AVEFNFGQKE KPYFPIPEEY TFIQNVPLED RVRGPKGPEE KKDCEVVMMI
410 420 430 440 450
GLPGAGKTTW VTKHAAENPG KYNILGTNTI MDKMMVAGFK KQMADTGKLN
460 470 480 490 500
TLLQRAPQCL GKFIEIAARK KRNFILDQTN VSAAAQRRKM CLFAGFQRKA
510 520 530 540 550
VVVCPKDEDY KQRTQKKAEV EGKDLPEHAV LKMKGNFTLP EVAECFDEIT
560 570 580 590 600
YVELQKEEAQ KLLEQYKEES KKALPPEKKQ NTGSKKSNKN KSGKNQFNRG
610 620 630 640 650
GGHRGRGGFN MRGGNFRGGA PGNRGGYNRR GNMPQRGGGG GGSGGIGYPY
660 670 680 690 700
PRAPVFPGRG SYSNRGNYNR GGMPNRGNYN QNFRGRGNNR GYKNQSQGYN
710 720
QWQQGQFWGQ KPWSQHYHQG YY
Length:722
Mass (Da):79,716
Last modified:December 1, 2001 - v1
Checksum:iA35C0DA46EAE6FD2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC015782 mRNA. Translation: AAH15782.1.
RefSeqiNP_114032.2. NM_031844.2.
UniGeneiHs.106212.
Hs.411490.
Hs.743421.

Genome annotation databases

GeneIDi3192.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC015782 mRNA. Translation: AAH15782.1.
RefSeqiNP_114032.2. NM_031844.2.
UniGeneiHs.106212.
Hs.411490.
Hs.743421.

3D structure databases

ProteinModelPortaliQ96BA7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4992512.
STRINGi9606.ENSP00000283179.

Proteomic databases

PaxDbiQ96BA7.
PRIDEiQ96BA7.

Protocols and materials databases

DNASUi3192.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi3192.

Organism-specific databases

CTDi3192.
PharmGKBiPA162391486.

Phylogenomic databases

eggNOGiENOG410IR1W. Eukaryota.
ENOG410Y1WQ. LUCA.
HOVERGENiHBG061101.

Miscellaneous databases

GenomeRNAii3192.

Gene expression databases

BgeeiQ96BA7.
GenevisibleiQ96BA7. HS.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR001870. B30.2/SPRY.
IPR013320. ConA-like_dom.
IPR026745. hnRNP_U.
IPR027417. P-loop_NTPase.
IPR003877. SPRY_dom.
[Graphical view]
PANTHERiPTHR12381:SF11. PTHR12381:SF11. 2 hits.
PfamiPF00622. SPRY. 1 hit.
[Graphical view]
SMARTiSM00449. SPRY. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50188. B302_SPRY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: ColonImported.

Entry informationi

Entry nameiQ96BA7_HUMAN
AccessioniPrimary (citable) accession number: Q96BA7
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: June 8, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.