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Q96A22

- CK052_HUMAN

UniProt

Q96A22 - CK052_HUMAN

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Protein

Uncharacterized protein C11orf52

Gene

C11orf52

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C11orf52
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 11

Organism-specific databases

HGNCiHGNC:30531. C11orf52.

Subcellular locationi

GO - Cellular componenti

  1. extracellular vesicular exosome Source: UniProtKB
Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA143485347.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 123123Uncharacterized protein C11orf52PRO_0000263609Add
BLAST

Proteomic databases

PaxDbiQ96A22.
PRIDEiQ96A22.

PTM databases

PhosphoSiteiQ96A22.

Expressioni

Gene expression databases

BgeeiQ96A22.
CleanExiHS_C11orf52.
ExpressionAtlasiQ96A22. baseline.
GenevestigatoriQ96A22.

Organism-specific databases

HPAiHPA038387.

Interactioni

Protein-protein interaction databases

BioGridi124891. 2 interactions.
IntActiQ96A22. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliQ96A22.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG41312.
GeneTreeiENSGT00390000015195.
HOGENOMiHOG000111731.
HOVERGENiHBG081214.
InParanoidiQ96A22.
OMAiYADIQVY.
PhylomeDBiQ96A22.
TreeFamiTF336887.

Family and domain databases

InterProiIPR028106. DUF4578.
[Graphical view]
PfamiPF15147. DUF4578. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q96A22-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGNRVCCGGS WSCPSTFQKK KKTGSQTRRT LKPQPQQLQQ NLPKGHETTG
60 70 80 90 100
HTYERVLQQQ GSQERSPGLM SEDSNLHYAD IQVCSRPHAR EVKHVHLENA
110 120
TEYATLRFPQ ATPRYDSKNG TLV
Length:123
Mass (Da):13,921
Last modified:December 4, 2007 - v2
Checksum:i481C3A554E64B33D
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti23 – 231T → R.2 Publications
Corresponds to variant rs7124407 [ dbSNP | Ensembl ].
VAR_029587

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK057948 mRNA. Translation: BAB71620.1.
AP000907 Genomic DNA. No translation available.
BC008501 mRNA. Translation: AAH08501.1.
BC110872 mRNA. Translation: AAI10873.1.
CCDSiCCDS8353.1.
RefSeqiNP_542390.2. NM_080659.2.
UniGeneiHs.97013.

Genome annotation databases

EnsembliENST00000278601; ENSP00000278601; ENSG00000149300.
GeneIDi91894.
KEGGihsa:91894.
UCSCiuc001pmh.3. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK057948 mRNA. Translation: BAB71620.1 .
AP000907 Genomic DNA. No translation available.
BC008501 mRNA. Translation: AAH08501.1 .
BC110872 mRNA. Translation: AAI10873.1 .
CCDSi CCDS8353.1.
RefSeqi NP_542390.2. NM_080659.2.
UniGenei Hs.97013.

3D structure databases

ProteinModelPortali Q96A22.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 124891. 2 interactions.
IntActi Q96A22. 1 interaction.

PTM databases

PhosphoSitei Q96A22.

Proteomic databases

PaxDbi Q96A22.
PRIDEi Q96A22.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000278601 ; ENSP00000278601 ; ENSG00000149300 .
GeneIDi 91894.
KEGGi hsa:91894.
UCSCi uc001pmh.3. human.

Organism-specific databases

CTDi 91894.
GeneCardsi GC11P111789.
HGNCi HGNC:30531. C11orf52.
HPAi HPA038387.
neXtProti NX_Q96A22.
PharmGKBi PA143485347.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG41312.
GeneTreei ENSGT00390000015195.
HOGENOMi HOG000111731.
HOVERGENi HBG081214.
InParanoidi Q96A22.
OMAi YADIQVY.
PhylomeDBi Q96A22.
TreeFami TF336887.

Miscellaneous databases

GenomeRNAii 91894.
NextBioi 77515.

Gene expression databases

Bgeei Q96A22.
CleanExi HS_C11orf52.
ExpressionAtlasi Q96A22. baseline.
Genevestigatori Q96A22.

Family and domain databases

InterProi IPR028106. DUF4578.
[Graphical view ]
Pfami PF15147. DUF4578. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT ARG-23.
    Tissue: Gastric mucosa.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT ARG-23.
    Tissue: PNS and Prostate.

Entry informationi

Entry nameiCK052_HUMAN
AccessioniPrimary (citable) accession number: Q96A22
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: December 4, 2007
Last modified: October 29, 2014
This is version 85 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

External Data

Dasty 3