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Q96A22 (CK052_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein C11orf52
Gene names
Name:C11orf52
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length123 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Coding sequence diversityPolymorphism
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentextracellular vesicular exosome

Inferred from direct assay PubMed 19056867. Source: UniProt

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 123123Uncharacterized protein C11orf52
PRO_0000263609

Natural variations

Natural variant231T → R. Ref.1 Ref.3
Corresponds to variant rs7124407 [ dbSNP | Ensembl ].
VAR_029587

Sequences

Sequence LengthMass (Da)Tools
Q96A22 [UniParc].

Last modified December 4, 2007. Version 2.
Checksum: 481C3A554E64B33D

FASTA12313,921
        10         20         30         40         50         60 
MGNRVCCGGS WSCPSTFQKK KKTGSQTRRT LKPQPQQLQQ NLPKGHETTG HTYERVLQQQ 

        70         80         90        100        110        120 
GSQERSPGLM SEDSNLHYAD IQVCSRPHAR EVKHVHLENA TEYATLRFPQ ATPRYDSKNG 


TLV 

« Hide

References

[1]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT ARG-23.
Tissue: Gastric mucosa.
[2]"Human chromosome 11 DNA sequence and analysis including novel gene identification."
Taylor T.D., Noguchi H., Totoki Y., Toyoda A., Kuroki Y., Dewar K., Lloyd C., Itoh T., Takeda T., Kim D.-W., She X., Barlow K.F., Bloom T., Bruford E., Chang J.L., Cuomo C.A., Eichler E., FitzGerald M.G. expand/collapse author list , Jaffe D.B., LaButti K., Nicol R., Park H.-S., Seaman C., Sougnez C., Yang X., Zimmer A.R., Zody M.C., Birren B.W., Nusbaum C., Fujiyama A., Hattori M., Rogers J., Lander E.S., Sakaki Y.
Nature 440:497-500(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT ARG-23.
Tissue: PNS and Prostate.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK057948 mRNA. Translation: BAB71620.1.
AP000907 Genomic DNA. No translation available.
BC008501 mRNA. Translation: AAH08501.1.
BC110872 mRNA. Translation: AAI10873.1.
RefSeqNP_542390.2. NM_080659.2.
UniGeneHs.97013.

3D structure databases

ProteinModelPortalQ96A22.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid124891. 2 interactions.
IntActQ96A22. 1 interaction.

PTM databases

PhosphoSiteQ96A22.

Proteomic databases

PaxDbQ96A22.
PRIDEQ96A22.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000278601; ENSP00000278601; ENSG00000149300.
ENST00000571962; ENSP00000461313; ENSG00000262600.
GeneID91894.
KEGGhsa:91894.
UCSCuc001pmh.3. human.

Organism-specific databases

CTD91894.
GeneCardsGC11P111789.
HGNCHGNC:30531. C11orf52.
HPAHPA038387.
neXtProtNX_Q96A22.
PharmGKBPA143485347.
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG41312.
HOGENOMHOG000111731.
HOVERGENHBG081214.
InParanoidQ96A22.
OMAHTYERVL.
PhylomeDBQ96A22.
TreeFamTF336887.

Gene expression databases

BgeeQ96A22.
CleanExHS_C11orf52.
GenevestigatorQ96A22.

Family and domain databases

InterProIPR028106. DUF4578.
[Graphical view]
PfamPF15147. DUF4578. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi91894.
NextBio77515.

Entry information

Entry nameCK052_HUMAN
AccessionPrimary (citable) accession number: Q96A22
Entry history
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: December 4, 2007
Last modified: April 16, 2014
This is version 81 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human chromosome 11

Human chromosome 11: entries, gene names and cross-references to MIM