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Q96A22

- CK052_HUMAN

UniProt

Q96A22 - CK052_HUMAN

Protein

Uncharacterized protein C11orf52

Gene

C11orf52

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein C11orf52
    Gene namesi
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 11

    Organism-specific databases

    HGNCiHGNC:30531. C11orf52.

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular vesicular exosome Source: UniProt

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA143485347.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 123123Uncharacterized protein C11orf52PRO_0000263609Add
    BLAST

    Proteomic databases

    PaxDbiQ96A22.
    PRIDEiQ96A22.

    PTM databases

    PhosphoSiteiQ96A22.

    Expressioni

    Gene expression databases

    BgeeiQ96A22.
    CleanExiHS_C11orf52.
    GenevestigatoriQ96A22.

    Organism-specific databases

    HPAiHPA038387.

    Interactioni

    Protein-protein interaction databases

    BioGridi124891. 2 interactions.
    IntActiQ96A22. 1 interaction.

    Structurei

    3D structure databases

    ProteinModelPortaliQ96A22.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG41312.
    HOGENOMiHOG000111731.
    HOVERGENiHBG081214.
    InParanoidiQ96A22.
    OMAiYADIQVY.
    PhylomeDBiQ96A22.
    TreeFamiTF336887.

    Family and domain databases

    InterProiIPR028106. DUF4578.
    [Graphical view]
    PfamiPF15147. DUF4578. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q96A22-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGNRVCCGGS WSCPSTFQKK KKTGSQTRRT LKPQPQQLQQ NLPKGHETTG    50
    HTYERVLQQQ GSQERSPGLM SEDSNLHYAD IQVCSRPHAR EVKHVHLENA 100
    TEYATLRFPQ ATPRYDSKNG TLV 123
    Length:123
    Mass (Da):13,921
    Last modified:December 4, 2007 - v2
    Checksum:i481C3A554E64B33D
    GO

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti23 – 231T → R.2 Publications
    Corresponds to variant rs7124407 [ dbSNP | Ensembl ].
    VAR_029587

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK057948 mRNA. Translation: BAB71620.1.
    AP000907 Genomic DNA. No translation available.
    BC008501 mRNA. Translation: AAH08501.1.
    BC110872 mRNA. Translation: AAI10873.1.
    CCDSiCCDS8353.1.
    RefSeqiNP_542390.2. NM_080659.2.
    UniGeneiHs.97013.

    Genome annotation databases

    EnsembliENST00000278601; ENSP00000278601; ENSG00000149300.
    GeneIDi91894.
    KEGGihsa:91894.
    UCSCiuc001pmh.3. human.

    Keywords - Coding sequence diversityi

    Polymorphism

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK057948 mRNA. Translation: BAB71620.1 .
    AP000907 Genomic DNA. No translation available.
    BC008501 mRNA. Translation: AAH08501.1 .
    BC110872 mRNA. Translation: AAI10873.1 .
    CCDSi CCDS8353.1.
    RefSeqi NP_542390.2. NM_080659.2.
    UniGenei Hs.97013.

    3D structure databases

    ProteinModelPortali Q96A22.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 124891. 2 interactions.
    IntActi Q96A22. 1 interaction.

    PTM databases

    PhosphoSitei Q96A22.

    Proteomic databases

    PaxDbi Q96A22.
    PRIDEi Q96A22.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000278601 ; ENSP00000278601 ; ENSG00000149300 .
    GeneIDi 91894.
    KEGGi hsa:91894.
    UCSCi uc001pmh.3. human.

    Organism-specific databases

    CTDi 91894.
    GeneCardsi GC11P111789.
    HGNCi HGNC:30531. C11orf52.
    HPAi HPA038387.
    neXtProti NX_Q96A22.
    PharmGKBi PA143485347.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG41312.
    HOGENOMi HOG000111731.
    HOVERGENi HBG081214.
    InParanoidi Q96A22.
    OMAi YADIQVY.
    PhylomeDBi Q96A22.
    TreeFami TF336887.

    Miscellaneous databases

    GenomeRNAii 91894.
    NextBioi 77515.

    Gene expression databases

    Bgeei Q96A22.
    CleanExi HS_C11orf52.
    Genevestigatori Q96A22.

    Family and domain databases

    InterProi IPR028106. DUF4578.
    [Graphical view ]
    Pfami PF15147. DUF4578. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT ARG-23.
      Tissue: Gastric mucosa.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT ARG-23.
      Tissue: PNS and Prostate.

    Entry informationi

    Entry nameiCK052_HUMAN
    AccessioniPrimary (citable) accession number: Q96A22
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 12, 2006
    Last sequence update: December 4, 2007
    Last modified: October 1, 2014
    This is version 84 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 11
      Human chromosome 11: entries, gene names and cross-references to MIM
    2. Human entries with polymorphisms or disease mutations
      List of human entries with polymorphisms or disease mutations
    3. Human polymorphisms and disease mutations
      Index of human polymorphisms and disease mutations

    External Data

    Dasty 3