Q969R2 (OSBP2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 93.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Oxysterol-binding protein 2 Alternative name(s): Oxysterol-binding protein-related protein 4 Short name=ORP-4 Short name=OSBP-related protein 4 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 916 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Binds 7-ketocholesterol. |
| Subcellular location | |
| Tissue specificity | Expressed mainly in retina, testis, and fetal liver. Ref.1 |
| Sequence similarities | Belongs to the OSBP family. Contains 1 PH domain. |
| Sequence caution | The sequence AAK56864.1 differs from that shown. Reason: Erroneous initiation. The sequence AAK56865.1 differs from that shown. Reason: Erroneous initiation. The sequence BAB33334.2 differs from that shown. Reason: Erroneous initiation. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Lipid transport Transport |
| Cellular component | Membrane |
| Coding sequence diversity | Polymorphism |
| Ligand | Lipid-binding |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | lipid transport Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular_component | membrane Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | cholesterol binding Inferred from direct assay PubMed 17428193. Source: BHF-UCL phospholipid bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 916 | 916 | Oxysterol-binding protein 2 | PRO_0000100366 | |||||
Regions | |||||||||
| Domain | 182 – 274 | 93 | PH | ||||||
Natural variations | |||||||||
| Natural variant | 760 | 1 | M → V. Corresponds to variant rs34240867 [ dbSNP | Ensembl ]. | VAR_053546 | |||||
Experimental info | |||||||||
| Sequence conflict | 34 | 1 | T → A in BAB33334. Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Molecular and biochemical characterization of a novel oxysterol-binding protein (OSBP2) highly expressed in retina." Moreira E.F., Jaworski C., Li A., Rodriguez I.R. J. Biol. Chem. 276:18570-18578(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], NUCLEOTIDE SEQUENCE [MRNA] OF 2-916, TISSUE SPECIFICITY. |
| [2] | "The OSBP-related protein family in humans." Lehto M., Laitinen S., Chinetti G., Johansson M., Ehnholm C., Staels B., Ikonen E., Olkkonen V.M. J. Lipid Res. 42:1203-1213(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [3] | "Identification of novel transcribed sequences on human chromosome 22 by expressed sequence tag mapping." Hirosawa M., Nagase T., Murahashi Y., Kikuno R., Ohara O. DNA Res. 8:1-9(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain. |
| [4] | Ohara O., Nagase T., Kikuno R. Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases Cited for: SEQUENCE REVISION. |
| [5] | "The DNA sequence of human chromosome 22." Dunham I., Hunt A.R., Collins J.E., Bruskiewich R., Beare D.M., Clamp M., Smink L.J., Ainscough R., Almeida J.P., Babbage A.K., Bagguley C., Bailey J., Barlow K.F., Bates K.N., Beasley O.P., Bird C.P., Blakey S.E., Bridgeman A.M. Wright H.Nature 402:489-495(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF288741 mRNA. Translation: AAK56864.1. Different initiation. AF288742 Genomic DNA. Translation: AAK56865.1. Different initiation. AF323731 mRNA. Translation: AAG53406.1. AB051451 mRNA. Translation: BAB33334.2. Different initiation. AC004542 Genomic DNA. Translation: AAC12953.1. AL079299, AC004542, AL022336 Genomic DNA. Translation: CAQ07396.1. AL022336, AC004542, AL079299 Genomic DNA. Translation: CAQ07892.1. CH471095 Genomic DNA. Translation: EAW59916.1. |
| IPI | IPI00746936. |
| PIR | T02435. |
| RefSeq | NP_110385.1. NM_030758.3. |
| UniGene | Hs.517546. |
3D structure databases | |
| ProteinModelPortal | Q969R2. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 9606.ENSP00000332576. |
PTM databases | |
| PhosphoSite | Q969R2. |
Polymorphism databases | |
| DMDM | 88984633. |
Proteomic databases | |
| PaxDb | Q969R2. |
| PRIDE | Q969R2. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000332585; ENSP00000332576; ENSG00000184792. |
| GeneID | 23762. |
| KEGG | hsa:23762. |
| UCSC | uc003aiy.1. human. |
Organism-specific databases | |
| CTD | 23762. |
| GeneCards | GC22P031089. |
| H-InvDB | HIX0041322. |
| HGNC | HGNC:8504. OSBP2. |
| HPA | HPA021514. |
| MIM | 606729. gene. |
| neXtProt | NX_Q969R2. |
| PharmGKB | PA32823. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG281324. |
| HOGENOM | HOG000231233. |
| HOVERGEN | HBG053374. |
| OMA | DGLKIPS. |
Gene expression databases | |
| ArrayExpress | Q969R2. |
| Bgee | Q969R2. |
| CleanEx | HS_OSBP2. |
| Genevestigator | Q969R2. |
| GermOnline | ENSG00000184792. Homo sapiens. |
Family and domain databases | |
| Gene3D | 2.30.29.30. 1 hit. |
| InterPro | IPR000648. Oxysterol-bd. IPR018494. Oxysterol-bd_CS. IPR011993. PH_like_dom. IPR001849. Pleckstrin_homology. [Graphical view] |
| PANTHER | PTHR10972. PTHR10972. 1 hit. |
| Pfam | PF01237. Oxysterol_BP. 1 hit. PF00169. PH. 1 hit. [Graphical view] |
| SMART | SM00233. PH. 1 hit. [Graphical view] |
| PROSITE | PS01013. OSBP. 1 hit. PS50003. PH_DOMAIN. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 23762. |
| NextBio | 46715. |
| SOURCE | Search... |
Entry information
| Entry name | OSBP2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q969R2 Secondary accession number(s): B0QYG1 Q9BZF0 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 22 Human chromosome 22: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
