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Q96631

- RDRP_BBV

UniProt

Q96631 - RDRP_BBV

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Protein

RNA-directed RNA polymerase

Gene
N/A
Organism
Black beetle virus (BBV)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

RNA-dependent RNA polymerase which replicates the viral genome composed of 2 RNA segments, RNA1 AND RNA2 Reviewed prediction.

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).

GO - Molecular functioni

  1. RNA-directed RNA polymerase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Nucleotidyltransferase, RNA-directed RNA polymerase, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
RNA-directed RNA polymerase (EC:2.7.7.48)
Short name:
RdRp
Alternative name(s):
RNA replicase
Short name:
Protein A
OrganismiBlack beetle virus (BBV)
Taxonomic identifieri12285 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageNodaviridaeAlphanodavirus
Virus hostiHeteronychus arator [TaxID: 295550]

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 998998RNA-directed RNA polymerasePRO_0000222444Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ96631.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi739 – 7424Poly-Thr

Sequence similaritiesi

Family and domain databases

InterProiIPR020237. RNA-dir_pol_C_nodavirus.
[Graphical view]
ProDomiPD029982. RNA-dir_pol_nodavirus. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Q96631-1 [UniParc]FASTAAdd to Basket

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MTLKVILGEH QITRTELPVG IATVSGCGAV VYCISKFWGY GAIAPYPQSG    50
GNRVTRALQR AVIDKTKTPI ETRFYPLDSL RTVTPKRAVD NGHAVSGAVR 100
DAARRLIDES ITAVGGSKFE VNPNPNSSTG LRNHFHFAVG DLAQDFRNDT 150
PADDAFIVGV DVDYYVTEPD VLLEHMRPVV LHTFNPKKVS GFDADSPFTI 200
KNNLVEYKVS GGAAWVHPVW DWCEAGEFIA SRVRTSWKEW FLQLPLRMIG 250
LEKVGYHKIH HCRPWTDCPD RALVYTIPQY VIWRFNWIDT ELHVRKLKRI 300
EYQDETKPGW NRLEYVTDRN ELLVSIGREG EHAQITIEKE KLDMLSGLSA 350
TQSVNVRLIG MGHKDPQYTS MIVQYYTGKK VVSPISPTVY KPTMPRVHWP 400
VTSDADVPEV SARQYTLPIV SDCMMMPMIK RWETMSESIE RRVTFVANDK 450
KPSDRIAKIA ETFVKLMNGP FKDLDPLSIE ETIERLNKPS QQLQLRAVFE 500
MIGVEPRQLI ESFNKNEPGM KSSRIISGFP DILFILKVSR YTLAYSDIVL 550
HAEHNEHWYY PGRNPTEIAD GVCEFVSECD AEVIETDFSN LDGRVSSWMQ 600
RNIAQKAMVQ AFRPEYRDEI ISFMDTIINC SAKAKRFGFR YEPGVGVKSG 650
SSTTTPHNTQ YNGCVEFTAL TFEHPDAEPE DLFRLIGPKC GDDGLSRAII 700
QKSINRAAKC FGLELKVERY NPEIGLCFLS RVFVDPLATT TTIQDPLRTL 750
RKLHLTTRDP TIPLADAACD RVEGHLCTDA LTPLISDYCK MVLRLYGPTA 800
STEQVRNQRR SRNKEKPYWL TCDGSWPQHP QDAHLMKQVL IKRTAIDEDQ 850
VDALIGRFAA MKDVWEKITH DSEESAAACT FDEDGVAPNS VDESLPMLND 900
AKQTRANPGT SRPHSNGGGS SHGNELPRRT EQRAQGPRQP ARLPKQGKTN 950
GKSDGNITAG ETQRGGIPRG KGPRGGKTNT RRTPPKAGAQ PQPSNNRK 998
Length:998
Mass (Da):112,197
Last modified:April 16, 2002 - v2
Checksum:iA57DA34AFE0A296B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X02396 Genomic RNA. Translation: CAA26238.1.
PIRiS78471. QQBBB1.
RefSeqiYP_053043.1. NC_001411.2.

Genome annotation databases

GeneIDi956649.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X02396 Genomic RNA. Translation: CAA26238.1 .
PIRi S78471. QQBBB1.
RefSeqi YP_053043.1. NC_001411.2.

3D structure databases

ProteinModelPortali Q96631.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 956649.

Family and domain databases

InterProi IPR020237. RNA-dir_pol_C_nodavirus.
[Graphical view ]
ProDomi PD029982. RNA-dir_pol_nodavirus. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. "Structure of the black beetle virus genome and its functional implications."
    Dasmahapatra B., Dasgupta R., Ghosh A., Kaesberg P.
    J. Mol. Biol. 182:183-189(1985) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
  2. "Sequence of the black beetle virus subgenomic RNA and its location in the viral genome."
    Guarino L.A., Ghosh A., Dasmahapatra B., Dasgupta R., Kaesberg P.
    Virology 139:199-203(1984) [PubMed] [Europe PMC] [Abstract]
    Cited for: PRELIMINARY PARTIAL NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiRDRP_BBV
AccessioniPrimary (citable) accession number: Q96631
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 16, 2002
Last sequence update: April 16, 2002
Last modified: April 16, 2014
This is version 44 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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