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Protein
Submitted name:

PRF

Gene

Prf

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Plant defenseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
PRFImported
Gene namesi
Name:PrfImported
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)Imported
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon

PTM / Processingi

Proteomic databases

PaxDbiQ96485.

Interactioni

Protein-protein interaction databases

STRINGi4081.Solyc05g013280.2.1.

Structurei

3D structure databases

ProteinModelPortaliQ96485.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1098 – 1377280NB-ARCInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the disease resistance NB-LRR family.SAAS annotation

Phylogenomic databases

eggNOGiKOG4658. Eukaryota.
COG4886. LUCA.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
3.80.10.10. 2 hits.
InterProiIPR032675. L_dom-like.
IPR021929. Late_blight_resistance_R1.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF12061. DUF3542. 2 hits.
PF00931. NB-ARC. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

Q96485-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKECRDAIG TINLVKGQHL DRRTTNQLED AIKHLTHVAV FLTNLEKRHP
60 70 80 90 100
ANGISIHLRP LFLEAHDGFS LMCSHPPRSQ FTVKLDNIAE KFKSSKASRS
110 120 130 140 150
TRQVIPELLQ IIEPENIAKR IKASKPSRSS SPITVDMVGF IESLLGSVHR
160 170 180 190 200
ALFFISAGPP VSMLDKKLRH LQVFFRLISK RGIEHESMKD LFYHVEDVAY
210 220 230 240 250
TAAQLCVLGS SCHMDDEFSK FLERISRPFS PGLRQVYLNA LIGLNSSRSK
260 270 280 290 300
TTMNAKYMLD FVSALQDDLR LRCDNRIRWL QRGLSYLCRF LRDIESYPVS
310 320 330 340 350
HRQLISLQLN MEDLAIGSAN AIYSYDEDMD KTSEIDHELF HLQMKFNYVK
360 370 380 390 400
VEVDLIRLQN IQGTIIVPMK DLIDYVWEEL MFFRSYFMDA FDQFKEQTRI
410 420 430 440 450
TVILNYIQSA VSQAWSVCDS LCHDLNQNDL AREINCLHFQ LLLKFKFIKV
460 470 480 490 500
AIRQMCPSIS ASSTPDHPMI DLLNFLPMNF EAIDSYSSML KASCPSSSHR
510 520 530 540 550
PNRDAESPNT SFLCGPNTDV YSFYSSSSRI PKMDEILKRF HEYILVNLLR
560 570 580 590 600
KDETNLTFTI ADEVKKFYEG LLLMVTYLIE PPVPHTECRK QNDLSMRHEA
610 620 630 640 650
VAIEAESAVC LHYEDNMNNN SREINQVLQF LTVTFWLIKS EGNLMDLLKH
660 670 680 690 700
KSTLGNQVLD LIESAHEELI LLRSILMDLL RKKLYRLDDL LMHAEVTAKR
710 720 730 740 750
LAIFSGSCYE YFMNGSSTEK MRPLLSDFLQ EIESVKVEFR NVCLQVLDIS
760 770 780 790 800
PFSLTDGEGL VNFLLKNQAK VPNDDAVSSD GSLEDASSTE KMGLPSDFLR
810 820 830 840 850
EIESVEIKEA RKLYDQVLDA THCETSKTDG KSFINIMLTQ QDKLPDYDAG
860 870 880 890 900
SVSYLLNQIS VVKDKLLHIG SLLVDIVQYR NMHIELTDLA ERVQDKNYIC
910 920 930 940 950
FFSVKGYIPA WYYTLYLSDV KQLLKFVEAE VKIICLKVPD SSSYSFPKTN
960 970 980 990 1000
GLGYLNCFLG KLEELLRSKL DLIIDLKHQI ESVKEGLLCL RSFIDHFSES
1010 1020 1030 1040 1050
YDEHDEACGL IARVSVMAYK AEYVIDSCLA YSHPLWYKVL WISEVLENIK
1060 1070 1080 1090 1100
LVNKVVGETC ERRNIEVTVH EVAKTTTYVA PSFSAYTQRA NEEMEGFQDT
1110 1120 1130 1140 1150
IDELKDKLLG GSPELDVISI VGMPGLGKTT LAKKIYNDPE VTSRFDVHAQ
1160 1170 1180 1190 1200
CVVTQLYSWR ELLLTILNDV LEPSDRNEKE DGEIADELRR FLLTKRFLIL
1210 1220 1230 1240 1250
IDDVWDYKVW DNLCMCFSDV SNRSRIILTT RLNDVAEYVK CESDPHHLRL
1260 1270 1280 1290 1300
FRDDESWTLL QKEVFQGESC PPELEDVGFE ISKSCRGLPL SVVLVAGVLK
1310 1320 1330 1340 1350
QKKKTLDSWK VVEQSLSSQR IGSLEESISI IGFSYKNLPH YLKPCFLYFG
1360 1370 1380 1390 1400
GFLQGKDIHV SKMTKLWVAE GFVQANNEKG QEDTAQGFLD DLIGRNVVMA
1410 1420 1430 1440 1450
MEKRPNTKVK TCRIHDLLHK FCMEKAKQED FLLQINSGEG VFPERLEEYR
1460 1470 1480 1490 1500
LFVHSYQDEI DLWRPSRSNV RSLLFNAIDP DNLLWPRDIS FIFESFKLVK
1510 1520 1530 1540 1550
VLDLESFNIG GTFPTEIQYL IQMKYFAAQT DANSIPSSIA KLENLETFVV
1560 1570 1580 1590 1600
RGLGGEMILP CSLLKMVKLR HIHVNDRVSF GLHENMDVLT GNSQLPNLET
1610 1620 1630 1640 1650
FSTPRLFYGK DAEKVLRKMP KLRKLSCIFS GTFGYSRKLK GRCVRFPRLD
1660 1670 1680 1690 1700
FLSHLESLKL VSNSYPAKLP HKFNFPSQLR ELTLSKFRLP WTQISIIAEL
1710 1720 1730 1740 1750
PNLVILKLLL RAFEGDHWEV KDSEFLELKY LKLDNLKVVQ WSISDDAFPK
1760 1770 1780 1790 1800
LEHLVLTKCK HLEKIPSRFE DAVCLNRVEV NWCNWNVANS AQDIQTMQHE
1810 1820
VIANDSFTVT IQPPDWSKEQ PLDS
Length:1,824
Mass (Da):209,589
Last modified:February 1, 1997 - v1
Checksum:iB6A63CEACA98EE82
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U65391 Genomic DNA. Translation: AAC49408.1.
PIRiT07589.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U65391 Genomic DNA. Translation: AAC49408.1.
PIRiT07589.

3D structure databases

ProteinModelPortaliQ96485.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4081.Solyc05g013280.2.1.

Proteomic databases

PaxDbiQ96485.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG4658. Eukaryota.
COG4886. LUCA.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
3.80.10.10. 2 hits.
InterProiIPR032675. L_dom-like.
IPR021929. Late_blight_resistance_R1.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF12061. DUF3542. 2 hits.
PF00931. NB-ARC. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ96485_SOLLC
AccessioniPrimary (citable) accession number: Q96485
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: May 11, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.