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Q96412 (SPE1_DIACA) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Arginine decarboxylase

Short name=ADC
Short name=ARGDC
EC=4.1.1.19
Gene names
Name:ADC
OrganismDianthus caryophyllus (Carnation) (Clove pink)
Taxonomic identifier3570 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeCaryophyllalesCaryophyllaceaeDianthus

Protein attributes

Sequence length725 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

L-arginine = agmatine + CO2.

Cofactor

Pyridoxal phosphate.

Magnesium.

Pathway

Amine and polyamine biosynthesis; agmatine biosynthesis; agmatine from L-arginine: step 1/1.

Sequence similarities

Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 725725Arginine decarboxylase
PRO_0000149950

Regions

Region340 – 35011Substrate-binding By similarity

Amino acid modifications

Modified residue1561N6-(pyridoxal phosphate)lysine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q96412 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 6B1C8BA09DE19355

FASTA72577,676
        10         20         30         40         50         60 
MPAVACYVDT SAAVYGGAGA LSLPASEINF SGVPPTTTST TVNQPPPPQQ WSPSLSAELY 

        70         80         90        100        110        120 
RIDRWGPPYF AVNSSGNVTV KPFGDATLPH QEIDLLKVVK KVSDSKSSSG LGLHLPVIIR 

       130        140        150        160        170        180 
FPDVLKHRLE SLQSAFDFAV RTHGYGSHYQ GVYPVKCNQD RYIVEDIVEF GSGFRFGLEA 

       190        200        210        220        230        240 
GSKPELLMAM SSLCKGSPDS LLVCNGFKDA EYISLAIIGR KLGLNTVIVI EQEEEVDMAI 

       250        260        270        280        290        300 
ELSRKMGIRP VVGVRAKLRT KHSGHFGSTS GEKGKFGLTT TQILRVVRKL ENFGMLDCLQ 

       310        320        330        340        350        360 
LLHFHIGSQI PTTTLLSDGV AEASQVYCEL TRLGAHMRVI DIGGGLGIDY DGSKSGDSDL 

       370        380        390        400        410        420 
SVGYTLEEYA SAVVGTVMSV CDRKGVKSPV ICSESVRAIV SHHSILVFEA VSSSSSASPP 

       430        440        450        460        470        480 
MPGSTLALDY LVDGLTDEVK GEYRSLTAAA MRGEYESCLM YSGMLKQRCV ELFKDGCLGM 

       490        500        510        520        530        540 
EQLAAVDGLC ELVSKALGVA DGVCTYNVNL SVFTSIPDFW GIGQLFPIMP IHRLDQQPKA 

       550        560        570        580        590        600 
RGILSDLTCD SDGKIDKFIG DESSLPLHEL SGGEGYYLGM FLGGAYEEAL GGVHNLFGGP 

       610        620        630        640        650        660 
SVVRVQQSDG PQSYAVTRAV PGPSSSDVLR VMHHEPELMF QTLKHRAEEC DNDYTAGPLA 

       670        680        690        700        710        720 
DMLAQSFNST PYLVPGHATG SCGFSNGSGL VNGCREYFYG VDDGCNAAAV DAAAGEEEQW 


SYVCA 

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References

[1]"Nucleotide sequence of cDNA encoding arginine decarboxylase from carnation flowers."
Chang K.S., Nam K.H., Lee M.M., Lee S.H., Park K.Y.
Plant Gene Register PGR96-092
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: cv. White Sim.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U63832 mRNA. Translation: AAB67887.1.
PIRT10721.

3D structure databases

ProteinModelPortalQ96412.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayUPA00186; UER00284.

Family and domain databases

Gene3D2.40.37.10. 2 hits.
InterProIPR009006. Ala_racemase/Decarboxylase_C.
IPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
[Graphical view]
PfamPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PIRSFPIRSF001336. Arg_decrbxlase. 1 hit.
PRINTSPR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR01273. speA. 1 hit.
PROSITEPS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSPE1_DIACA
AccessionPrimary (citable) accession number: Q96412
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: February 1, 1997
Last modified: February 19, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways