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Protein
Submitted name:

Class IV chitinase EP3B/E6

Gene

EP3

Organism
Daucus carota (Wild carrot)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandChitin-bindingPROSITE-ProRule annotationSAAS annotation

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Names & Taxonomyi

Protein namesi
Submitted name:
Class IV chitinase EP3B/E6Imported
Gene namesi
Name:EP3Imported
OrganismiDaucus carota (Wild carrot)Imported
Taxonomic identifieri4039 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridscampanulidsApialesApiaceaeApioideaeScandiceaeDaucinaeDaucusDaucus sect. Daucus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500432406221 – 266Sequence analysisAdd BLAST246

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi25 ↔ 37UniRule annotation
Disulfide bondi30 ↔ 44UniRule annotation
Disulfide bondi87 ↔ 136UniRule annotation
Disulfide bondi149 ↔ 157UniRule annotation
Disulfide bondi234 ↔ 266UniRule annotation

Keywords - PTMi

Disulfide bondUniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ96411.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 55Chitin-binding type-1InterPro annotationAdd BLAST36

Sequence similaritiesi

Belongs to the glycosyl hydrolase 19 family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

CDDicd00325. chitinase_glyco_hydro_19. 1 hit.
Gene3Di3.30.60.10. 1 hit.
InterProiView protein in InterPro
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
PfamiView protein in Pfam
PF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 2 hits.
PIRSFiPIRSF001060. Endochitinase. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD000609. Chitin_bd_1. 1 hit.
SMARTiView protein in SMART
SM00270. ChtBD1. 1 hit.
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiView protein in PROSITE
PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00773. CHITINASE_19_1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q96411-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTFFIFLTA IFIAASLVSA QNCNCTAGLC CSKHGYCGTT SDYCGEGCQA
60 70 80 90 100
GPCTNTAPTG GGNGVSVADI VTDDFFNGII SQATGDCDGK NFYTRSAFLN
110 120 130 140 150
ALQSYSSFGT SGSADDSKRE IAAFFAHATH ETGYFCHKEE TNGRDKNYCE
160 170 180 190 200
SKAGYPCNAN VKYFGRGPLQ LTWNYNYIDA GNSNDFDGLN NPDIVASDAV
210 220 230 240 250
VSFKTALWYW KVKVQSVTSQ GFGATIRAIN SIECNGGSPD AVNSRVSLYN
260
SYCSKFGVAP GDNQRC
Length:266
Mass (Da):28,439
Last modified:February 1, 1997 - v1
Checksum:i9F87391411E91C1B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U52848 mRNA. Translation: AAB08470.1.
PIRiT14348.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U52848 mRNA. Translation: AAB08470.1.
PIRiT14348.

3D structure databases

ProteinModelPortaliQ96411.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

CDDicd00325. chitinase_glyco_hydro_19. 1 hit.
Gene3Di3.30.60.10. 1 hit.
InterProiView protein in InterPro
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
PfamiView protein in Pfam
PF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 2 hits.
PIRSFiPIRSF001060. Endochitinase. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD000609. Chitin_bd_1. 1 hit.
SMARTiView protein in SMART
SM00270. ChtBD1. 1 hit.
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiView protein in PROSITE
PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00773. CHITINASE_19_1. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ96411_DAUCA
AccessioniPrimary (citable) accession number: Q96411
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: April 12, 2017
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.