Reviewed,
UniProtKB/Swiss-Prot Q96330 (FLS1_ARATH)
Last modified
June 16, 2009.
Version 67.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin
| Protein names | Recommended name: Flavonol synthase/flavanone 3-hydroxylase EC=1.14.11.23 EC=1.14.11.9 Alternative name(s): FLS 1 | ||||||
| Gene names |
| ||||||
| Organism | Arabidopsis thaliana (Mouse-ear cress) [Complete proteome] | ||||||
| Taxonomic identifier | 3702 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis |
Protein attributes
| Sequence length | 336 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Catalyzes the formation of flavonols from dihydroflavonols. It can act on dihydrokaempferol to produce kaempferol, on dihydroquercetin to produce quercitin and on dihydromyricetin to produce myricetin. |
| Catalytic activity | A dihydroflavonol + 2-oxoglutarate + O2 = a flavonol + succinate + CO2 + H2O. A flavanone + 2-oxoglutarate + O2 = a dihydroflavonol + succinate + CO2. |
| Cofactor | Binds 1 ascorbate molecule per subunit. Binds 1 iron ion per subunit. |
| Pathway | |
| Subcellular location | |
| Sequence similarities | Belongs to the iron/ascorbate-dependent oxidoreductase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Flavonoid biosynthesis |
| Cellular component | Cytoplasm |
| Ligand | Iron Metal-binding Vitamin C |
| Molecular function | Dioxygenase Oxidoreductase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | flavonoid biosynthetic process Inferred from direct assay. Source: TAIR oxidation reductionInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | L-ascorbic acid binding Inferred from electronic annotation. Source: UniProtKB-KW flavonol synthase activityInferred from direct assay. Source: TAIR iron ion bindingInferred from electronic annotation. Source: UniProtKB-KW naringenin 3-dioxygenase activityInferred from electronic annotation. Source: EC oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
| ||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Characterization of flavonol synthase and leucoanthocyanidin dioxygenase genes in Arabidopsis. Further evidence for differential regulation of 'early' and 'late' genes." Pelletier M.K., Murrell J.R., Shirley B.W. Plant Physiol. 113:1437-1445(1997) [PubMed: 9112784] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: cv. Landsberg erecta. |
| [2] | "Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes." Wisman E., Hartmann U., Sagasser M., Baumann E., Palme K., Hahlbrock K., Saedler H., Weisshaar B. Proc. Natl. Acad. Sci. U.S.A. 95:12432-12437(1998) [PubMed: 9770503] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA]. Strain: cv. Columbia and cv. Landsberg erecta. |
| [3] | "Structural analysis of Arabidopsis thaliana chromosome 5. II. Sequence features of the regions of 1,044,062 bp covered by thirteen physically assigned P1 clones." Kotani H., Nakamura Y., Sato S., Kaneko T., Asamizu E., Miyajima N., Tabata S. DNA Res. 4:291-300(1997) [PubMed: 9405937] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia. |
| [4] | "Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. Ecker J.R.Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia. |
| [5] | "Full-length cDNA from Arabidopsis thaliana." Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
Cross-references
Sequence databases | |
|---|---|
| U72631 Genomic DNA. Translation: AAB17393.1. U84258 Genomic DNA. Translation: AAC69362.1. U84259 mRNA. Translation: AAC69363.1. U84260 mRNA. Translation: AAB41504.1. AB006697 Genomic DNA. Translation: BAB10013.1. AY058068 mRNA. Translation: AAL24176.1. BT000494 mRNA. Translation: AAN18063.1. AY086328 mRNA. Translation: AAM64397.1. | |
| IPI | IPI00532962. |
| RefSeq | NP_196481.1. |
| UniGene | At.8771 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1GP6 based on UniProtKB Q96323. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q96330. 3 interactions. |
Proteomic databases | |
| PRIDE | Q96330. |
| ProMEX | Q96330. |
Genome annotation databases | |
| GeneID | 830765. |
| GenomeReviews | Gene locus AT5G08640 in contig BA000015_GR. |
| KEGG | ath:AT5G08640. |
| NMPDR | fig|3702.1.peg.23017. |
Organism-specific databases | |
| TAIR | At5g08640. |
Phylogenomic databases | |
| OMA | Q96330. REVNEEY. |
Enzyme and pathway databases | |
| BRENDA | 1.14.11.23. 302. 1.14.11.9. 302. |
Gene expression databases | |
| ArrayExpress | Q96330. |
| GermOnline | AT5G08640. Arabidopsis thaliana. |
Family and domain databases | |
| InterPro | IPR005123. Oxoglutarate/Fe-dep_Oase. [Graphical view] |
| Pfam | PF03171. 2OG-FeII_Oxy. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | FLS1_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q96330 Secondary accession number(s): O04730 O04832 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Arabidopsis thaliana Arabidopsis thaliana: entries and gene names |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


