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Q96299

- 14339_ARATH

UniProt

Q96299 - 14339_ARATH

Protein

14-3-3-like protein GF14 mu

Gene

GRF9

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
    • BLAST
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    • History
      Entry version 105 (01 Oct 2014)
      Sequence version 2 (01 Dec 2000)
      Previous versions | rss
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    Functioni

    Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    14-3-3-like protein GF14 mu
    Alternative name(s):
    General regulatory factor 9
    Gene namesi
    Name:GRF9
    Ordered Locus Names:At2g42590
    ORF Names:F14N22.14
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 2

    Organism-specific databases

    TAIRiAT2G42590.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 26326314-3-3-like protein GF14 muPRO_0000058671Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei239 – 2391Phosphoserine2 Publications

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    PaxDbiQ96299.
    PRIDEiQ96299.

    Expressioni

    Gene expression databases

    ArrayExpressiQ96299.
    GenevestigatoriQ96299.

    Interactioni

    Protein-protein interaction databases

    BioGridi4196. 4 interactions.
    IntActiQ96299. 4 interactions.
    MINTiMINT-145086.

    Structurei

    3D structure databases

    ProteinModelPortaliQ96299.
    SMRiQ96299. Positions 6-235.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the 14-3-3 family.Curated

    Phylogenomic databases

    eggNOGiCOG5040.
    HOGENOMiHOG000240379.
    InParanoidiQ96299.
    PhylomeDBiQ96299.

    Family and domain databases

    Gene3Di1.20.190.20. 1 hit.
    InterProiIPR000308. 14-3-3.
    IPR023409. 14-3-3_CS.
    IPR023410. 14-3-3_domain.
    [Graphical view]
    PANTHERiPTHR18860. PTHR18860. 1 hit.
    PfamiPF00244. 14-3-3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000868. 14-3-3. 1 hit.
    PRINTSiPR00305. 1433ZETA.
    SMARTiSM00101. 14_3_3. 1 hit.
    [Graphical view]
    SUPFAMiSSF48445. SSF48445. 1 hit.
    PROSITEiPS00796. 1433_1. 1 hit.
    PS00797. 1433_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    This entry describes 1 isoform i produced by alternative splicing. Align

    Note: A number of isoforms are produced. According to EST sequences.

    Isoform 1 (identifier: Q96299-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MGSGKERDTF VYLAKLSEQA ERYEEMVESM KSVAKLNVDL TVEERNLLSV    50
    GYKNVIGSRR ASWRIFSSIE QKEAVKGNDV NVKRIKEYME KVELELSNIC 100
    IDIMSVLDEH LIPSASEGES TVFFNKMKGD YYRYLAEFKS GNERKEAADQ 150
    SLKAYEIATT AAEAKLPPTH PIRLGLALNF SVFYYEIMNA PERACHLAKQ 200
    AFDEAISELD TLNEESYKDS TLIMQLLRDN LTLWTSDISE EGGDDAHKTN 250
    GSAKPGAGGD DAE 263
    Length:263
    Mass (Da):29,520
    Last modified:December 1, 2000 - v2
    Checksum:iB70A45DF64DFD926
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U60444 mRNA. Translation: AAB49334.2.
    AB011545 mRNA. Translation: BAA32735.1.
    AF145301 Genomic DNA. Translation: AAD51784.1.
    AC007087 Genomic DNA. Translation: AAD23005.1.
    CP002685 Genomic DNA. Translation: AEC10142.1.
    AY093076 mRNA. Translation: AAM13075.1.
    AY128764 mRNA. Translation: AAM91164.1.
    AY085927 mRNA. Translation: AAM63139.1.
    PIRiT52037.
    RefSeqiNP_565977.1. NM_129820.2. [Q96299-1]
    UniGeneiAt.21859.

    Genome annotation databases

    EnsemblPlantsiAT2G42590.1; AT2G42590.1; AT2G42590. [Q96299-1]
    AT2G42590.3; AT2G42590.3; AT2G42590.
    GeneIDi818859.
    KEGGiath:AT2G42590.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U60444 mRNA. Translation: AAB49334.2 .
    AB011545 mRNA. Translation: BAA32735.1 .
    AF145301 Genomic DNA. Translation: AAD51784.1 .
    AC007087 Genomic DNA. Translation: AAD23005.1 .
    CP002685 Genomic DNA. Translation: AEC10142.1 .
    AY093076 mRNA. Translation: AAM13075.1 .
    AY128764 mRNA. Translation: AAM91164.1 .
    AY085927 mRNA. Translation: AAM63139.1 .
    PIRi T52037.
    RefSeqi NP_565977.1. NM_129820.2. [Q96299-1 ]
    UniGenei At.21859.

    3D structure databases

    ProteinModelPortali Q96299.
    SMRi Q96299. Positions 6-235.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 4196. 4 interactions.
    IntActi Q96299. 4 interactions.
    MINTi MINT-145086.

    Proteomic databases

    PaxDbi Q96299.
    PRIDEi Q96299.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT2G42590.1 ; AT2G42590.1 ; AT2G42590 . [Q96299-1 ]
    AT2G42590.3 ; AT2G42590.3 ; AT2G42590 .
    GeneIDi 818859.
    KEGGi ath:AT2G42590.

    Organism-specific databases

    TAIRi AT2G42590.

    Phylogenomic databases

    eggNOGi COG5040.
    HOGENOMi HOG000240379.
    InParanoidi Q96299.
    PhylomeDBi Q96299.

    Gene expression databases

    ArrayExpressi Q96299.
    Genevestigatori Q96299.

    Family and domain databases

    Gene3Di 1.20.190.20. 1 hit.
    InterProi IPR000308. 14-3-3.
    IPR023409. 14-3-3_CS.
    IPR023410. 14-3-3_domain.
    [Graphical view ]
    PANTHERi PTHR18860. PTHR18860. 1 hit.
    Pfami PF00244. 14-3-3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000868. 14-3-3. 1 hit.
    PRINTSi PR00305. 1433ZETA.
    SMARTi SM00101. 14_3_3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48445. SSF48445. 1 hit.
    PROSITEi PS00796. 1433_1. 1 hit.
    PS00797. 1433_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Columbia.
    2. "Members of the Arabidopsis 14-3-3 gene family trans-complement two types of defects in fission yeast."
      Kuromori T., Yamamoto M.
      Plant Sci. 158:155-161(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    3. "Sequences of five Arabidopsis general regulatory factor (GRF) genes encoding 14-3-3 proteins."
      Chung H.-J., Shanker S., Ferl R.J.
      Plant Gene Register PGR99-114
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: cv. Columbia.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    5. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    6. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
      Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
      , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
      Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    7. "Full-length cDNA from Arabidopsis thaliana."
      Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
      Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    8. "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana."
      Jones A.M.E., MacLean D., Studholme D.J., Serna-Sanz A., Andreasson E., Rathjen J.P., Peck S.C.
      J. Proteomics 72:439-451(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-239, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Strain: cv. Columbia.
    9. "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks."
      Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., Grossmann J., Gruissem W., Baginsky S.
      Plant Physiol. 150:889-903(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-239, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry namei14339_ARATH
    AccessioniPrimary (citable) accession number: Q96299
    Secondary accession number(s): O80367
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 15, 1998
    Last sequence update: December 1, 2000
    Last modified: October 1, 2014
    This is version 105 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3