Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

DNA polymerase

Gene

gene 2

Organism
Bacillus phage GA-1 (Bacteriophage GA-1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DNA-directed DNA polymeraseUniRule annotation, Nucleotidyltransferase, Transferase

Keywords - Biological processi

DNA replicationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
DNA polymeraseUniRule annotation (EC:2.7.7.7UniRule annotation)
Gene namesi
Name:gene 2Imported
OrganismiBacillus phage GA-1 (Bacteriophage GA-1)Imported
Taxonomic identifieri12345 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageCaudoviralesPodoviridaePicovirinaePhi29likevirus
Virus hostiBacillus subtilis [TaxID: 1423]
Proteomesi
  • UP000002580 Componenti: Genome

Structurei

3D structure databases

ProteinModelPortaliQ96206.
SMRiQ96206. Positions 2-578.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini50 – 478429DNA_pol_B_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the DNA polymerase type-B family.UniRule annotation

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.90.1600.10. 2 hits.
InterProiIPR006172. DNA-dir_DNA_pol_B.
IPR017964. DNA-dir_DNA_pol_B_CS.
IPR004868. DNA-dir_DNA_pol_B_mt/vir.
IPR014416. DNA-dir_DNA_polB_phi29_vir.
IPR023211. DNA_pol_palm_dom.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF03175. DNA_pol_B_2. 1 hit.
[Graphical view]
PIRSFiPIRSF004178. Dpol_Bac_phage. 1 hit.
PRINTSiPR00106. DNAPOLB.
SMARTiSM00486. POLBc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS00116. DNA_POLYMERASE_B. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q96206-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARSVYVCDF ETTTDPEDCR LWAWGWMDIY NTDKWSYGED IDSFMEWALN
60 70 80 90 100
SNSDIYFHNL KFDGSFILPW WLRNGYVHTE EDRTNTPKEF TTTISGMGQW
110 120 130 140 150
YAVDVCINTR GKNKNHVVFY DSLKKLPFKV EQIAKGFGLP VLKGDIDYKK
160 170 180 190 200
YRPVGYVMDD NEIEYLKHDL LIVALALRSM FDNDFTSMTV GSDALNTYKE
210 220 230 240 250
MLGVKQWEKY FPVLSLKVNS EIRKAYKGGF TWVNPKYQGE TVYGGMVFDV
260 270 280 290 300
NSMYPAMMKN KLLPYGEPVM FKGEYKKNVE YPLYIQQVRC FFELKKDKIP
310 320 330 340 350
CIQIKGNARF GQNEYLSTSG DEYVDLYVTN VDWELIKKHY DIFEEEFIGG
360 370 380 390 400
FMFKGFIGFF DEYIDRFMEI KNSPDSSAEQ SLQAKLMLNS LYGKFATNPD
410 420 430 440 450
ITGKVPYLDE NGVLKFRKGE LKERDPVYTP MGCFITAYAR ENILSNAQKL
460 470 480 490 500
YPRFIYADTD SIHVEGLGEV DAIKDVIDPK KLGYWDHEAT FQRARYVRQK
510 520 530 540 550
TYFIETTWKE NDKGKLVVCE PQDATKVKPK IACAGMSDAI KERIRFNEFK
560 570
IGYSTHGSLK PKNVLGGVVL MDYPFAIK
Length:578
Mass (Da):67,142
Last modified:February 1, 1997 - v1
Checksum:i9146E3BAC07FE39A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X96987 Genomic DNA. Translation: CAA65712.1.
RefSeqiNP_073685.1. NC_002649.1.

Genome annotation databases

GeneIDi919900.
KEGGivg:919900.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X96987 Genomic DNA. Translation: CAA65712.1.
RefSeqiNP_073685.1. NC_002649.1.

3D structure databases

ProteinModelPortaliQ96206.
SMRiQ96206. Positions 2-578.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi919900.
KEGGivg:919900.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.90.1600.10. 2 hits.
InterProiIPR006172. DNA-dir_DNA_pol_B.
IPR017964. DNA-dir_DNA_pol_B_CS.
IPR004868. DNA-dir_DNA_pol_B_mt/vir.
IPR014416. DNA-dir_DNA_polB_phi29_vir.
IPR023211. DNA_pol_palm_dom.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF03175. DNA_pol_B_2. 1 hit.
[Graphical view]
PIRSFiPIRSF004178. Dpol_Bac_phage. 1 hit.
PRINTSiPR00106. DNAPOLB.
SMARTiSM00486. POLBc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS00116. DNA_POLYMERASE_B. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ96206_BPGA1
AccessioniPrimary (citable) accession number: Q96206
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: December 9, 2015
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.