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Q961B8 (Q961B8_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

LD24316p EMBL AAK93123.1
Gene names
Name:BEST:LD29214 EMBL AAK93123.1
ORF Names:CG8290 FlyBase FBgn0026573, Dmel_CG8290 EMBL AAM68703.1
OrganismDrosophila melanogaster (Fruit fly) EMBL AAK93123.1
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length1125 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q961B8 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 00DC312588909306

FASTA1,125127,412
        10         20         30         40         50         60 
MSNSAPGSES GLAKVATPSP SPLAKLDADF TSSKFEMHPS LSDEERRFYL KMYPNVDLVN 

        70         80         90        100        110        120 
QRKVHCTVCK LHLGTAPAAE SNIKMHPILR VTHCVKCHDF YNSGEFSKGE DGSELYCRWC 

       130        140        150        160        170        180 
GQGGEVYCCS TCPYVFCKSC IVKNLSKGVI VDIEQNENWN CFSCTSKILW PLRAQHWALV 

       190        200        210        220        230        240 
NYLQTQKRAL QTLQLPEVEA RRQMLKDNSN CCRLAKSKTS SLSDSMESLE SNVSKRSQGS 

       250        260        270        280        290        300 
SAGSSKRGSM PKTIPPGPPS KRAKASNNEV VCTPDLLSML EPDCQLSVTP KPTGRQTVTA 

       310        320        330        340        350        360 
ANITTPRIVT VQQNYQPGQS SSNSGSNGSV SGSSSVPPTR SSLPPPLVLS GSGIRYRQNA 

       370        380        390        400        410        420 
PGGVSGVVRR TVVPNSVKTT GPVFHTINGF KVDLNSAAQQ DSYRLPNGRL IQVKRQVPQT 

       430        440        450        460        470        480 
IQPASTVPTP PTPPALVVPQ VGPGVVIRPR APITTNRPSL HISTYGSNMG IYNPQTNQQQ 

       490        500        510        520        530        540 
RAPQVRVGNA NPAPPPLQGL PPNANGGQTL MITPAPQPAP KVPTLVRLTF PNTPMGQARA 

       550        560        570        580        590        600 
QLQEQIFSAM DICTHLTGKV VSLTHSNAYN QVRSYLELKE LYIHMSYLMT YAIGRFKNLQ 

       610        620        630        640        650        660 
EKCLVDMREK GFKNDANSLE NGQLAAAVDY VCYGQLDDVD LFNTGCNSFH NQVYEYRKSL 

       670        680        690        700        710        720 
HANLKDGEDC EPLPPLMPLG VRAEGDPIDE PEEPETVPEP QQDDTEKDHE DAAEFDYDEP 

       730        740        750        760        770        780 
EDLDDDLDDD DLDNEECGEL GTEESMNRNE QAHAYDRKLT RLLREYPSLW CTRHPDYGKK 

       790        800        810        820        830        840 
EVTNKQWRVI ASHFPRGDDI KLRWKNVRKR YVRIERRLKQ GKRFKGYFDK ATNYLENRDR 

       850        860        870        880        890        900 
PRSEWLAVDC GEDDGDGFER KHLDVIENKM EQKAHKQPAV KINLKGGSRI PTRPLEVRPI 

       910        920        930        940        950        960 
DQRIITFAKS HPVLWRKSAD PEFNSIDEQT RKSLWQNFWK SAPNYACEYL VERWQQMYEM 

       970        980        990       1000       1010       1020 
YKSFRLKSIK DKGIFANLEL KYSKYLASLY FLYKIDEQDL RDEFEPLQDC VPSGTDSAGN 

      1030       1040       1050       1060       1070       1080 
LKDMPDDKQF CQQLVLAMRA YPTLWNPRHV DYSDVGARER LWPEVARRLP RFKRDAQACK 

      1090       1100       1110       1120 
LRWQMAKFAY ECYLREMERH PRVNERKLQK LRSNFPLEEM RFLNI 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. expand/collapse author list , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAK93123.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY051699 mRNA. Translation: AAK93123.1.
AE013599 Genomic DNA. Translation: AAM68703.1.
RefSeqNP_610716.1. NM_136872.2.
UniGeneDm.4505.

3D structure databases

HSSPHSSP built from PDB template 1MM2 based on UniProtKB Q14839.
ProteinModelPortalQ961B8.
SMRQ961B8. Positions 61-187.
ModBaseSearch...

Proteomic databases

PRIDEQ961B8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0088041; FBpp0087147; FBgn0026573.
GeneID36278.
KEGGdme:Dmel_CG8290.
NMPDRfig|7227.3.peg.4726.
UCSCCG8290-RB. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0026573. CG8290.

Phylogenomic databases

GeneTreeEMGT00050000000583.
InParanoidQ961B8.

Gene expression databases

ArrayExpressQ961B8.
BgeeQ961B8.

Family and domain databases

InterProIPR006578. MADF-dom.
IPR011011. Znf_FYVE_PHD.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
Gene3DG3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
PfamPF10545. MADF_DNA_bdg. 2 hits.
[Graphical view]
SMARTSM00595. MADF. 2 hits.
[Graphical view]
SUPFAMSSF57903. FYVE_PHD_ZnF. 1 hit.
PROSITEPS51029. MADF. 3 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio797698.

Entry information

Entry nameQ961B8_DROME
AccessionPrimary (citable) accession number: Q961B8
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: January 25, 2012
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)