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Q95RB1 (Q95RB1_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 95. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
CG14641 EMBL AAF52166.2
Submitted name:
LD46870p EMBL AAL29064.1
Gene names
ORF Names:CG14641 EMBL AAL29064.1 FlyBase FBgn0037220, Dmel_CG14641 EMBL AAF52166.2
OrganismDrosophila melanogaster (Fruit fly) EMBL AAL29064.1
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length418 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 RRM (RNA recognition motif) domain. SAAS SAAS000571

Sequences

Sequence LengthMass (Da)Tools
Q95RB1 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: E7E23041F5064294

FASTA41847,168
        10         20         30         40         50         60 
MSMSKTTNTY NRQNWEDAEF PILCQTCLGD NPYVRMIKER FGKECKICTR PFTIFRWCPG 

        70         80         90        100        110        120 
ARMRFKKTEI CQTCARLKNV CQTCLLDLEY GLPIQVRDAA LKVADNMPQS DVNKEYYIQN 

       130        140        150        160        170        180 
IDAQLQDGDG TEAAGAVGRS LAANEMLSKL ARTAPYYKRN RPHICSFWVK GECKRGEECP 

       190        200        210        220        230        240 
YRHDKPNEPD DPLCEQNIKD RYYGRNDPVA EKIMKRAASL PTLEPPEDRN ITTLYVGNLP 

       250        260        270        280        290        300 
EEITEPELRD QFYQFGEIRS IALVPRQQCA FVQYTKRNAA ELAAERTFNK LVIQGRKVSI 

       310        320        330        340        350        360 
KWAHSQAKQG TAAKTDRRFD LAGIPPPSAK PNDYFNLRQE QINVMPAGMK LHQLPSNLVP 

       370        380        390        400        410 
ASAYQMYGQP TYAAPYGNAT STALSSSGVN LDSISIPPPP GQVPYPSQDA SRMGAVKK

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References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. expand/collapse author list , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL29064.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014297 Genomic DNA. Translation: AAF52166.2.
AY061516 mRNA. Translation: AAL29064.1.
RefSeqNP_649440.3. NM_141183.2.
UniGeneDm.3575.

3D structure databases

HSSPHSSP built from PDB template 1P1T based on UniProtKB P33240.
ProteinModelPortalQ95RB1.
SMRQ95RB1. Positions 227-303.
ModBaseSearch...

Protein-protein interaction databases

IntActQ95RB1. 5 interactions.
MINTMINT-289131.
STRINGQ95RB1.

Proteomic databases

PRIDEQ95RB1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0078985; FBpp0078624; FBgn0037220.
GeneID40529.
KEGGdme:Dmel_CG14641.
NMPDRfig|7227.3.peg.5665.
UCSCCG14641-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0037220. CG14641.

Phylogenomic databases

eggNOGinNOG08733.
GeneTreeEMGT00050000000093.
InParanoidQ95RB1.
OMACPYRHDK.
OrthoDBEOG4N5TC7.
PhylomeDBQ95RB1.

Gene expression databases

ArrayExpressQ95RB1.
BgeeQ95RB1.

Family and domain databases

InterProIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR000571. Znf_CCCH.
[Graphical view]
Gene3DG3DSA:3.30.70.330. a_b_plait_nuc_bd. 1 hit.
KOK12872.
PfamPF00076. RRM_1. 1 hit.
[Graphical view]
SMARTSM00360. RRM. 1 hit.
SM00356. ZnF_C3H1. 1 hit.
[Graphical view]
PROSITEPS50102. RRM. 1 hit.
PS50103. ZF_C3H1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio819204.

Entry information

Entry nameQ95RB1_DROME
AccessionPrimary (citable) accession number: Q95RB1
Secondary accession number(s): Q9VMZ0
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: January 25, 2012
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info