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Q95Q25 (Q95Q25_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 97. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Protein RAD-51, isoform a EMBL CAB61038.2
Gene names
Name:rad-51 EMBL CAB61038.2 WormBase WBGene00004297 WormBase Y43C5A.6a
ORF Names:CELE_Y43C5A.6 EMBL CAB61038.2, Y43C5A.6 WormBase WBGene00004297
OrganismCaenorhabditis elegans [Reference proteome] EMBL CAB61038.2
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the RecA family. RuleBase RU003422

Binary interactions

With

Entry

#Exp.

IntAct

Notes

itself6EBI-321895,EBI-321895
rfs-1P343483EBI-321895,EBI-330791
ubc-9Q950174EBI-321895,EBI-328938

Sequences

Sequence LengthMass (Da)Tools
Q95Q25 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: E844516B0C1A6AF8

FASTA39543,625
        10         20         30         40         50         60 
MGQSWGYEGI AKRSLCTHKW LYNLNLHSIN LFLPIESKMS AQASRQKKSD QEQRAADQAL 

        70         80         90        100        110        120 
LNAAIEDNAM EQDENFTVID KLESSGISSG DISKLKEAGY YTYESLAFTT RRELRNVKGI 

       130        140        150        160        170        180 
SDQKAEKIMK EAMKFVQMGF TTGAEVHVKR SQLVQIRTGS ASLDRLLGGG IETGSITEVY 

       190        200        210        220        230        240 
GEYRTGKTQL CHSLAVLCQL PIDMGGGEGK CMYIDTNATF RPERIIAIAQ RYNMDSAHVL 

       250        260        270        280        290        300 
ENIAVARAYN SEHLMALIIR AGAMMSESRY AVVIVDCATA HFRNEYTGRG DLAERQMKLS 

       310        320        330        340        350        360 
AFLKCLAKLA DEYGVAVIIT NQVVAQVDGG ASMFQADAKK PIGGHIIAHM STTRLYLRKG 

       370        380        390 
KGENRVAKMV QSPNLPEAEA TYSITNHGIE DARED

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
Caenorhabditis elegans Sequencing Consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2 EMBL CAB61038.2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AL023838 Genomic DNA. Translation: CAB61038.2.
RefSeqNP_001023465.1. NM_001028294.2.
UniGeneCel.19596.

3D structure databases

HSSPHSSP built from PDB template 1N0W based on UniProtKB Q06609.
ProteinModelPortalQ95Q25.
SMRQ95Q25. Positions 79-394.
ModBaseSearch...

Protein-protein interaction databases

DIPDIP-25225N.
IntActQ95Q25. 9 interactions.
MINTMINT-226974.
STRING6239.Y43C5A.6a.
Q95Q25.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaY43C5A.6a; Y43C5A.6a; Y43C5A.6.
GeneID177914.
KEGGcel:CELE_Y43C5A.6.
UCSCY43C5A.6b. c. elegans.

Organism-specific databases

CTD177914.
WormBaseY43C5A.6a; CE29064; WBGene00004297; rad-51.

Phylogenomic databases

GeneTreeENSGT00550000074609.
HOGENOMHOG000227426.
InParanoidQ95Q25.
KOK04482.
OMAMMAESRY.

Gene expression databases

ArrayExpressQ95Q25.

Family and domain databases

InterProIPR003593. AAA+_ATPase.
IPR011941. DNA_recomb/repair_Rad51.
IPR013632. DNA_recomb/repair_Rad51_C.
IPR016467. DNA_recomb/repair_RecA-like.
IPR020588. DNA_recomb_RecA/RadB_ATP-bd.
IPR010995. DNA_repair_Rad51/TF_NusA_a-hlx.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR020587. RecA_monomer-monomer_interface.
[Graphical view]
PANTHERPTHR22942:SF12. PTHR22942:SF12. 1 hit.
PfamPF08423. Rad51. 1 hit.
[Graphical view]
PIRSFPIRSF005856. Rad51. 1 hit.
SMARTSM00382. AAA. 1 hit.
SM00278. HhH1. 1 hit.
[Graphical view]
SUPFAMSSF47794. Rad51_N. 1 hit.
TIGRFAMsTIGR02239. recomb_RAD51. 1 hit.
PROSITEPS50162. RECA_2. 1 hit.
PS50163. RECA_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio898916.

Entry information

Entry nameQ95Q25_CAEEL
AccessionPrimary (citable) accession number: Q95Q25
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: May 1, 2013
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Interactions·Sequences·References·Cross-refs·Entry info