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Protein

NAC domain-containing protein 89

Gene

NAC089

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Transcription factor involved in plant cell division.1 Publication

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi119 – 17052PROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • transcription factor activity, sequence-specific DNA binding Source: TAIR

GO - Biological processi

  • negative regulation of flower development Source: TAIR
  • plant-type hypersensitive response Source: TAIR
  • positive regulation of transcription, DNA-templated Source: TAIR
  • response to endoplasmic reticulum stress Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
NAC domain-containing protein 89
Short name:
ANAC089
Alternative name(s):
Protein FRUCTOSE-SENSING QUANTITATIVE TRAIT LOCUS 6
Gene namesi
Name:NAC089
Synonyms:FAN, FSQ6
Ordered Locus Names:At5g22290
ORF Names:MWD9.7, T6G21.9
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G22290.

Subcellular locationi

GO - Cellular componenti

  • endoplasmic reticulum Source: TAIR
  • nucleus Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 340340NAC domain-containing protein 89PRO_0000416138Add
BLAST

Proteomic databases

PaxDbiQ94F58.
PRIDEiQ94F58.

Expressioni

Gene expression databases

GenevisibleiQ94F58. AT.

Interactioni

Subunit structurei

Interacts with PAS1.1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
AGP14Q9LVC02EBI-2319707,EBI-4429269
At5g44550Q9FI102EBI-2319707,EBI-4440466
PAS1Q7DMA96EBI-2319707,EBI-637668
TOM20-3P828742EBI-2319707,EBI-2352074

Protein-protein interaction databases

BioGridi17564. 238 interactions.
IntActiQ94F58. 269 interactions.
STRINGi3702.AT5G22290.1.

Structurei

3D structure databases

ProteinModelPortaliQ94F58.
SMRiQ94F58. Positions 23-165.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini21 – 164144NACPROSITE-ProRule annotationAdd
BLAST

Domaini

The NAC domain includes a DNA-binding domain and a dimerization domain.

Sequence similaritiesi

Contains 1 NAC domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410JXQC. Eukaryota.
ENOG41103SC. LUCA.
HOGENOMiHOG000151180.
InParanoidiQ94F58.
OMAiWEMAQSS.
PhylomeDBiQ94F58.

Family and domain databases

InterProiIPR003441. NAC-dom.
[Graphical view]
PfamiPF02365. NAM. 1 hit.
[Graphical view]
SUPFAMiSSF101941. SSF101941. 1 hit.
PROSITEiPS51005. NAC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q94F58-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTKAVGVSK DTAASMEAST VFPGFKFSPT DVELISYYLK RKMDGLERSV
60 70 80 90 100
EVIPDLEIYN FEPWDLPDKS IVKSDSEWFF FCARGKKYPH GSQNRRATKM
110 120 130 140 150
GYWKATGKER DVKSGSEVIG TKRTLVFHIG RAPKGERTDW IMHEYCVKGV
160 170 180 190 200
SLDDAMVVCR VRRNKEYNSG TSQKAPKPNS SAEKHAKVQN GATSSGSPSD
210 220 230 240 250
WDNLVDFYLA GESGEKLLAE MAESSENLQV DNDEDFFADI LRDEIINLDE
260 270 280 290 300
AVMTGNTPNE VPTLESASME IRVLPLPNMI DKQMSSLLEE RPSQKKKGKD
310 320 330 340
ATESLSSCFV GLYSIKSVNK ARWDVIIGVV ALIAMLFYLE
Length:340
Mass (Da):38,046
Last modified:December 1, 2001 - v1
Checksum:i14DB0290E32E15C1
GO

Sequence cautioni

The sequence BAB08327.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB007651 Genomic DNA. Translation: BAB08327.1. Different initiation.
AL589883 Genomic DNA. No translation available.
CP002688 Genomic DNA. Translation: AED93007.1.
AF385685 mRNA. Translation: AAK60278.1.
AY078006 mRNA. Translation: AAL77707.1.
RefSeqiNP_568414.1. NM_122134.3.
UniGeneiAt.7356.

Genome annotation databases

EnsemblPlantsiAT5G22290.1; AT5G22290.1; AT5G22290.
GeneIDi832289.
GrameneiAT5G22290.1; AT5G22290.1; AT5G22290.
KEGGiath:AT5G22290.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB007651 Genomic DNA. Translation: BAB08327.1. Different initiation.
AL589883 Genomic DNA. No translation available.
CP002688 Genomic DNA. Translation: AED93007.1.
AF385685 mRNA. Translation: AAK60278.1.
AY078006 mRNA. Translation: AAL77707.1.
RefSeqiNP_568414.1. NM_122134.3.
UniGeneiAt.7356.

3D structure databases

ProteinModelPortaliQ94F58.
SMRiQ94F58. Positions 23-165.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi17564. 238 interactions.
IntActiQ94F58. 269 interactions.
STRINGi3702.AT5G22290.1.

Proteomic databases

PaxDbiQ94F58.
PRIDEiQ94F58.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G22290.1; AT5G22290.1; AT5G22290.
GeneIDi832289.
GrameneiAT5G22290.1; AT5G22290.1; AT5G22290.
KEGGiath:AT5G22290.

Organism-specific databases

TAIRiAT5G22290.

Phylogenomic databases

eggNOGiENOG410JXQC. Eukaryota.
ENOG41103SC. LUCA.
HOGENOMiHOG000151180.
InParanoidiQ94F58.
OMAiWEMAQSS.
PhylomeDBiQ94F58.

Miscellaneous databases

PROiQ94F58.

Gene expression databases

GenevisibleiQ94F58. AT.

Family and domain databases

InterProiIPR003441. NAC-dom.
[Graphical view]
PfamiPF02365. NAM. 1 hit.
[Graphical view]
SUPFAMiSSF101941. SSF101941. 1 hit.
PROSITEiPS51005. NAC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence features of the regions of 1,191,918 bp covered by seventeen physically assigned P1 clones."
    Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N., Tabata S.
    DNA Res. 4:401-414(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
    Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.
    , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
    Nature 408:823-826(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  4. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  5. Cited for: GENE FAMILY, NOMENCLATURE.
  6. "The C terminus of the immunophilin PASTICCINO1 is required for plant development and for interaction with a NAC-like transcription factor."
    Smyczynski C., Roudier F., Gissot L., Vaillant E., Grandjean O., Morin H., Masson T., Bellec Y., Geelen D., Faure J.D.
    J. Biol. Chem. 281:25475-25484(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, INTERACTION WITH PAS1, SUBCELLULAR LOCATION.

Entry informationi

Entry nameiNAC89_ARATH
AccessioniPrimary (citable) accession number: Q94F58
Secondary accession number(s): Q9FMS2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 21, 2012
Last sequence update: December 1, 2001
Last modified: February 17, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.