Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Os01g0348700 protein

Gene

Os01g0348700

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
Os01g0348700 proteinImported
Submitted name:
Putative 60S ribosomal protein L23AImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Os01g0348700Imported
Ordered Locus Names:Os01g0348700Imported
ORF Names:B1051E10.13Imported, OsJ_01678Imported, OSNPB_010348700Imported, P0440D10.34Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 1

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os01g24690.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 62Ribosomal_L23eNInterPro annotationAdd BLAST49

Sequence similaritiesi

Belongs to the ribosomal protein L23P family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1751. Eukaryota.
COG0089. LUCA.
KOiK02893.
OMAiRMDAFRT.
OrthoDBiEOG09360UKG.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
HAMAPiMF_01369_A. Ribosomal_L23_A. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR019985. Ribosomal_L23.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR001014. Ribosomal_L23/L25_CS.
IPR005633. Ribosomal_L23/L25_N.
IPR013025. Ribosomal_L25/23.
[Graphical view]
PfamiPF00276. Ribosomal_L23. 1 hit.
PF03939. Ribosomal_L23eN. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.
TIGRFAMsiTIGR03636. uL23_arch. 1 hit.
PROSITEiPS00050. RIBOSOMAL_L23. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q94CM9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPKAAVKKA DGKTQQALKV AKAVKSGSIK RKSKKIRTSV TFHRPKTLKK
60 70 80 90 100
ARDPKYPRVS APGRNKLDQY QILKYPLTTE SAMKKIEDNN TLVFIVDLKA
110 120 130 140 150
DKKKIKAAVK KMYDIQAKKV NTLIRPDGKK KAYVKLTPDY DALDVANKIG

II
Length:152
Mass (Da):17,050
Last modified:December 1, 2001 - v1
Checksum:iEDFBAFF0EED1944D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003852 Genomic DNA. Translation: BAB63895.1.
AP003764 Genomic DNA. Translation: BAB93400.1.
AP008207 Genomic DNA. Translation: BAF04888.1.
AP014957 Genomic DNA. Translation: BAS72016.1.
CM000138 Genomic DNA. Translation: EAZ11804.1.
RefSeqiXP_015622490.1. XM_015767004.1.
UniGeneiOs.11507.

Genome annotation databases

EnsemblPlantsiOS01T0348700-01; OS01T0348700-01; OS01G0348700.
GeneIDi4326469.
GrameneiOS01T0348700-01; OS01T0348700-01; OS01G0348700.
KEGGiosa:4326469.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003852 Genomic DNA. Translation: BAB63895.1.
AP003764 Genomic DNA. Translation: BAB93400.1.
AP008207 Genomic DNA. Translation: BAF04888.1.
AP014957 Genomic DNA. Translation: BAS72016.1.
CM000138 Genomic DNA. Translation: EAZ11804.1.
RefSeqiXP_015622490.1. XM_015767004.1.
UniGeneiOs.11507.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os01g24690.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS01T0348700-01; OS01T0348700-01; OS01G0348700.
GeneIDi4326469.
GrameneiOS01T0348700-01; OS01T0348700-01; OS01G0348700.
KEGGiosa:4326469.

Phylogenomic databases

eggNOGiKOG1751. Eukaryota.
COG0089. LUCA.
KOiK02893.
OMAiRMDAFRT.
OrthoDBiEOG09360UKG.

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
HAMAPiMF_01369_A. Ribosomal_L23_A. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR019985. Ribosomal_L23.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR001014. Ribosomal_L23/L25_CS.
IPR005633. Ribosomal_L23/L25_N.
IPR013025. Ribosomal_L25/23.
[Graphical view]
PfamiPF00276. Ribosomal_L23. 1 hit.
PF03939. Ribosomal_L23eN. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.
TIGRFAMsiTIGR03636. uL23_arch. 1 hit.
PROSITEiPS00050. RIBOSOMAL_L23. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ94CM9_ORYSJ
AccessioniPrimary (citable) accession number: Q94CM9
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: October 5, 2016
This is version 130 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.