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Protein
Submitted name:

Os01g0348700 protein

Gene

Os01g0348700

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-OSA-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-OSA-1799339 SRP-dependent cotranslational protein targeting to membrane
R-OSA-72689 Formation of a pool of free 40S subunits
R-OSA-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-OSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-OSA-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Submitted name:
Os01g0348700 proteinImported
Submitted name:
Putative 60S ribosomal protein L23AImported
Gene namesi
Name:Os01g0348700Imported
Ordered Locus Names:Os01g0348700Imported
ORF Names:B1051E10.13Imported, OsJ_01678Imported, OSNPB_010348700Imported, P0440D10.34Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

ExpressionAtlasiQ94CM9 differential

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os01g24690.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 62Ribosomal_L23eNInterPro annotationAdd BLAST49

Sequence similaritiesi

Belongs to the universal ribosomal protein uL23 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1751 Eukaryota
COG0089 LUCA
KOiK02893
OMAiFPRKSAP
OrthoDBiEOG09360UKG

Family and domain databases

Gene3Di3.30.70.330, 1 hit
HAMAPiMF_01369_A Ribosomal_L23_A, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR019985 Ribosomal_L23
IPR012678 Ribosomal_L23/L15e_core_dom_sf
IPR001014 Ribosomal_L23/L25_CS
IPR005633 Ribosomal_L23/L25_N
IPR013025 Ribosomal_L25/23
PfamiView protein in Pfam
PF00276 Ribosomal_L23, 1 hit
PF03939 Ribosomal_L23eN, 1 hit
SUPFAMiSSF54189 SSF54189, 1 hit
TIGRFAMsiTIGR03636 uL23_arch, 1 hit
PROSITEiView protein in PROSITE
PS00050 RIBOSOMAL_L23, 1 hit

Sequencei

Sequence statusi: Complete.

Q94CM9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPKAAVKKA DGKTQQALKV AKAVKSGSIK RKSKKIRTSV TFHRPKTLKK
60 70 80 90 100
ARDPKYPRVS APGRNKLDQY QILKYPLTTE SAMKKIEDNN TLVFIVDLKA
110 120 130 140 150
DKKKIKAAVK KMYDIQAKKV NTLIRPDGKK KAYVKLTPDY DALDVANKIG

II
Length:152
Mass (Da):17,050
Last modified:December 1, 2001 - v1
Checksum:iEDFBAFF0EED1944D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003852 Genomic DNA Translation: BAB63895.1
AP003764 Genomic DNA Translation: BAB93400.1
AP008207 Genomic DNA Translation: BAF04888.1
AP014957 Genomic DNA Translation: BAS72016.1
CM000138 Genomic DNA Translation: EAZ11804.1
RefSeqiXP_015622490.1, XM_015767004.1
UniGeneiOs.11507

Genome annotation databases

EnsemblPlantsiOs01t0348700-01; Os01t0348700-01; Os01g0348700
GeneIDi4326469
GrameneiOs01t0348700-01; Os01t0348700-01; Os01g0348700
KEGGiosa:4326469

Similar proteinsi

Entry informationi

Entry nameiQ94CM9_ORYSJ
AccessioniPrimary (citable) accession number: Q94CM9
Entry historyiIntegrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: May 23, 2018
This is version 141 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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