Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q94CL7

- Q94CL7_ARATH

UniProt

Q94CL7 - Q94CL7_ARATH

Protein
Submitted name:

Phosphate starvation response 1 protein

Gene

phr1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 105 (01 Oct 2014)
      Sequence version 1 (01 Dec 2001)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. chromatin binding Source: InterPro
    2. DNA binding Source: InterPro
    3. sequence-specific DNA binding transcription factor activity Source: TAIR

    GO - Biological processi

    1. cellular response to high light intensity Source: TAIR
    2. cellular response to phosphate starvation Source: TAIR
    3. circadian rhythm Source: TAIR
    4. regulation of transcription, DNA-templated Source: TAIR
    5. sulfate ion homeostasis Source: TAIR

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Phosphate starvation response 1 proteinImported
    Submitted name:
    Phosphate starvation response regulator 1Imported
    Submitted name:
    Putative uncharacterized protein At4g28610Imported
    Gene namesi
    Name:phr1Imported
    Synonyms:PHR1Imported
    Ordered Locus Names:At4g28610Imported
    OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 4

    Organism-specific databases

    TAIRiAT4G28610.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: TAIR

    Expressioni

    Gene expression databases

    GenevestigatoriQ94CL7.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT4G28610.1-P.

    Structurei

    3D structure databases

    SMRiQ94CL7. Positions 225-280.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG275307.
    HOGENOMiHOG000064669.
    InParanoidiQ94CL7.
    OMAiVGHICSS.
    PhylomeDBiQ94CL7.

    Family and domain databases

    Gene3Di1.10.10.60. 1 hit.
    InterProiIPR009057. Homeodomain-like.
    IPR025756. Myb_CC_LHEQLE.
    IPR017930. Myb_dom.
    IPR006447. Myb_dom_plants.
    IPR001005. SANT/Myb.
    [Graphical view]
    PfamiPF14379. Myb_CC_LHEQLE. 1 hit.
    PF00249. Myb_DNA-binding. 1 hit.
    [Graphical view]
    SUPFAMiSSF46689. SSF46689. 1 hit.
    TIGRFAMsiTIGR01557. myb_SHAQKYF. 1 hit.
    PROSITEiPS51294. HTH_MYB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q94CL7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEARPVHRSG SRDLTRTSSI PSTQKPSPVE DSFMRSDNNS QLMSRPLGQT    50
    YHLLSSSNGG AVGHICSSSS SGFATNLHYS TMVSHEKQQH YTGSSSNNAV 100
    QTPSNNDSAW CHDSLPGGFL DFHETNPAIQ NNCQIEDGGI AAAFDDIQKR 150
    SDWHEWADHL ITDDDPLMST NWNDLLLETN SNSDSKDQKT LQIPQPQIVQ 200
    QQPSPSVELR PVSTTSSNSN NGTGKARMRW TPELHEAFVE AVNSLGGSER 250
    ATPKGVLKIM KVEGLTIYHV KSHLQKYRTA RYRPEPSETG SPERKLTPLE 300
    HITSLDLKGG IGITEALRLQ MEVQKQLHEQ LEIQRNLQLR IEEQGKYLQM 350
    MFEKQNSGLT KGTASTSDSA AKSEQEDKKT ADSKEVPEEE TRKCEELESP 400
    QPKRPKIDN 409
    Length:409
    Mass (Da):45,546
    Last modified:December 1, 2001 - v1
    Checksum:i2C59836D75FE33C3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY081290 mRNA. Translation: AAL91179.1.
    BT002187 mRNA. Translation: AAN72198.1.
    CP002687 Genomic DNA. Translation: AEE85512.1.
    AJ310799 mRNA. Translation: CAC59689.1.
    RefSeqiNP_194590.2. NM_119003.3.
    UniGeneiAt.4525.

    Genome annotation databases

    EnsemblPlantsiAT4G28610.1; AT4G28610.1; AT4G28610.
    GeneIDi828979.
    KEGGiath:AT4G28610.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY081290 mRNA. Translation: AAL91179.1 .
    BT002187 mRNA. Translation: AAN72198.1 .
    CP002687 Genomic DNA. Translation: AEE85512.1 .
    AJ310799 mRNA. Translation: CAC59689.1 .
    RefSeqi NP_194590.2. NM_119003.3.
    UniGenei At.4525.

    3D structure databases

    SMRi Q94CL7. Positions 225-280.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT4G28610.1-P.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT4G28610.1 ; AT4G28610.1 ; AT4G28610 .
    GeneIDi 828979.
    KEGGi ath:AT4G28610.

    Organism-specific databases

    TAIRi AT4G28610.

    Phylogenomic databases

    eggNOGi NOG275307.
    HOGENOMi HOG000064669.
    InParanoidi Q94CL7.
    OMAi VGHICSS.
    PhylomeDBi Q94CL7.

    Gene expression databases

    Genevestigatori Q94CL7.

    Family and domain databases

    Gene3Di 1.10.10.60. 1 hit.
    InterProi IPR009057. Homeodomain-like.
    IPR025756. Myb_CC_LHEQLE.
    IPR017930. Myb_dom.
    IPR006447. Myb_dom_plants.
    IPR001005. SANT/Myb.
    [Graphical view ]
    Pfami PF14379. Myb_CC_LHEQLE. 1 hit.
    PF00249. Myb_DNA-binding. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46689. SSF46689. 1 hit.
    TIGRFAMsi TIGR01557. myb_SHAQKYF. 1 hit.
    PROSITEi PS51294. HTH_MYB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
      EU, CSHL and WU Arabidopsis Sequencing Project
      Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
      , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
      Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.
    2. "A conserved MYB transcription factor involved in phosphate starvation signaling both in vascular plants and in unicellular algae."
      Rubio V., Linhares F., Solano R., Martin A.C., Iglesias J., Leyva A., Paz-Ares J.
      Genes Dev. 15:2122-2133(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    3. Cited for: NUCLEOTIDE SEQUENCE.
    4. Cited for: NUCLEOTIDE SEQUENCE.
    5. "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana."
      Jones A.M., MacLean D., Studholme D.J., Serna-Sanz A., Andreasson E., Rathjen J.P., Peck S.C.
      J. Proteomics 72:439-451(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    6. "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks."
      Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., Grossmann J., Gruissem W., Baginsky S.
      Plant Physiol. 150:889-903(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    7. TAIR10
      Swarbreck D., Lamesch P., Wilks C., Huala E.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    8. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. ColumbiaImported.

    Entry informationi

    Entry nameiQ94CL7_ARATH
    AccessioniPrimary (citable) accession number: Q94CL7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 1, 2001
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 105 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3