Q94CL7 (Q94CL7_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Phosphate starvation response 1 protein EMBL AEE85512.1

Submitted name:
Phosphate starvation response regulator 1 EMBL CAC59689.1
Submitted name:
Putative uncharacterized protein At4g28610 EMBL AAL91179.1

Gene names

Name:	phr1 EMBL CAC59689.1
Synonyms:	PHR1 EMBL AEE85512.1
Ordered Locus Names:	At4g28610 TAIR At4g28610
ORF Names:	AT4G28610 EMBL AEE85512.1

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL CAC59689.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	409 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	cellular response to high light intensity Inferred from mutant phenotype PubMed 21910737. Source: TAIR cellular response to phosphate starvation Inferred from mutant phenotype PubMed 16679424. Source: TAIR circadian rhythm Inferred from expression pattern PubMed 21499259. Source: TAIR sulfate ion homeostasis Inferred from mutant phenotype PubMed 21261953. Source: TAIR
Cellular_component	nucleus Inferred from direct assay Ref.1. Source: TAIR
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro chromatin binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from sequence or structural similarity PubMed 11118137. Source: TAIR
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q94CL7 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 2C59836D75FE33C3	FASTA	409	45,546
	10 20 30 40 50 60 MEARPVHRSG SRDLTRTSSI PSTQKPSPVE DSFMRSDNNS QLMSRPLGQT YHLLSSSNGG 70 80 90 100 110 120 AVGHICSSSS SGFATNLHYS TMVSHEKQQH YTGSSSNNAV QTPSNNDSAW CHDSLPGGFL 130 140 150 160 170 180 DFHETNPAIQ NNCQIEDGGI AAAFDDIQKR SDWHEWADHL ITDDDPLMST NWNDLLLETN 190 200 210 220 230 240 SNSDSKDQKT LQIPQPQIVQ QQPSPSVELR PVSTTSSNSN NGTGKARMRW TPELHEAFVE 250 260 270 280 290 300 AVNSLGGSER ATPKGVLKIM KVEGLTIYHV KSHLQKYRTA RYRPEPSETG SPERKLTPLE 310 320 330 340 350 360 HITSLDLKGG IGITEALRLQ MEVQKQLHEQ LEIQRNLQLR IEEQGKYLQM MFEKQNSGLT 370 380 390 400 KGTASTSDSA AKSEQEDKKT ADSKEVPEEE TRKCEELESP QPKRPKIDN

References

[1]	"A conserved MYB transcription factor involved in phosphate starvation signaling both in vascular plants and in unicellular algae." Rubio V., Linhares F., Solano R., Martin A.C., Iglesias J., Leyva A., Paz-Ares J. Genes Dev. 15:2122-2133(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	Nguyen M., Karlin-Neumann G., Southwick A., Lam B., Miranda M., Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C. , Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W. Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	Nguyen M., Karlin-Neumann G., Southwick A., Tripp M., Miranda M., Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C. , Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W. Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY081290 mRNA. Translation: AAL91179.1. BT002187 mRNA. Translation: AAN72198.1. CP002687 Genomic DNA. Translation: AEE85512.1. AJ310799 mRNA. Translation: CAC59689.1.
IPI	IPI00520685.
RefSeq	NP_194590.2. NM_119003.3.
UniGene	At.4525.
3D structure databases
HSSP	HSSP built from PDB template 1IRZ based on UniProtKB O49397.
SMR	Q94CL7. Positions 225-280.
ModBase	Search...
Protein-protein interaction databases
STRING	3702.AT4G28610.1-P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT4G28610.1; AT4G28610.1; AT4G28610.
GeneID	828979.
KEGG	ath:AT4G28610.
Organism-specific databases
TAIR	At4g28610.
Phylogenomic databases
eggNOG	NOG275307.
HOGENOM	HOG000064669.
InParanoid	Q94CL7.
OMA	EKQCKSG.
ProtClustDB	CLSN2915055.
Gene expression databases
Genevestigator	Q94CL7.
Family and domain databases
Gene3D	1.10.10.60. 1 hit.
InterPro	IPR009057. Homeodomain-like. IPR025756. Myb_CC_LHEQLE. IPR017930. Myb_dom. IPR006447. Myb_dom_plants. IPR001005. SANT/Myb. [Graphical view]
Pfam	PF14379. Myb_CC_LHEQLE. 1 hit. PF00249. Myb_DNA-binding. 1 hit. [Graphical view]
SUPFAM	SSF46689. Homeodomain_like. 1 hit.
TIGRFAMs	TIGR01557. myb_SHAQKYF. 1 hit.
PROSITE	PS51294. HTH_MYB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q94CL7_ARATH

Accession

Primary (citable) accession number: Q94CL7

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	May 1, 2013
This is version 92 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)