Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Glucan endo-1,3-beta-glucosidase 4

Gene

At3g13560

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei266NucleophileBy similarity1
Active sitei329Proton donorBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processPlant defense

Enzyme and pathway databases

BioCyciARA:AT3G13560-MONOMER

Protein family/group databases

CAZyiCBM43 Carbohydrate-Binding Module Family 43
GH17 Glycoside Hydrolase Family 17

Names & Taxonomyi

Protein namesi
Recommended name:
Glucan endo-1,3-beta-glucosidase 4 (EC:3.2.1.39)
Alternative name(s):
(1->3)-beta-glucan endohydrolase 4
Short name:
(1->3)-beta-glucanase 4
Beta-1,3-endoglucanase 4
Short name:
Beta-1,3-glucanase 4
Gene namesi
Ordered Locus Names:At3g13560
ORF Names:MRP15.22
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi

Organism-specific databases

AraportiAT3G13560
TAIRilocus:2092855 AT3G13560

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_000001188824 – 474Glucan endo-1,3-beta-glucosidase 4Add BLAST451
PropeptideiPRO_0000011889475 – 505Removed in mature formSequence analysisAdd BLAST31

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi70N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi110N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi178N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi256N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi298N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi338N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi357N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi363 ↔ 426By similarity
Glycosylationi453N-linked (GlcNAc...) asparagineSequence analysis1
Lipidationi474GPI-anchor amidated alanineSequence analysis1

Post-translational modificationi

Contains two additional disulfide bonds.By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein, GPI-anchor, Lipoprotein

Proteomic databases

PaxDbiQ94CD8
PRIDEiQ94CD8

Expressioni

Gene expression databases

ExpressionAtlasiQ94CD8 baseline and differential
GenevisibleiQ94CD8 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G13560.1

Structurei

3D structure databases

ProteinModelPortaliQ94CD8
SMRiQ94CD8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 17 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IF5R Eukaryota
ENOG410YASF LUCA
HOGENOMiHOG000238220
InParanoidiQ94CD8
KOiK19892
OMAiNFNSTAM
OrthoDBiEOG0936058Z
PhylomeDBiQ94CD8

Family and domain databases

InterProiView protein in InterPro
IPR000490 Glyco_hydro_17
IPR017853 Glycoside_hydrolase_SF
IPR012946 X8
PfamiView protein in Pfam
PF00332 Glyco_hydro_17, 1 hit
PF07983 X8, 1 hit
SMARTiView protein in SMART
SM00768 X8, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS00587 GLYCOSYL_HYDROL_F17, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q94CD8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLPRWFAEA LLLLLSILAC SNAAFIGVNI GTDLTNMPPP SDIVTLLKSQ
60 70 80 90 100
QITHVRLYDA NSHMLKAFAN TSIEVMVGVT NEEILKIGRF PSAAAAWVNK
110 120 130 140 150
NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK
160 170 180 190 200
VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
210 220 230 240 250
PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY
260 270 280 290 300
SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
310 320 330 340 350
GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG
360 370 380 390 400
SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
410 420 430 440 450
PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL
460 470 480 490 500
NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ

HDRLL
Length:505
Mass (Da):54,416
Last modified:December 1, 2001 - v1
Checksum:i4C6CA8CA9952B671
GO

Sequence cautioni

The sequence BAB01763 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP000603 Genomic DNA Translation: BAB01763.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE75372.1
CP002686 Genomic DNA Translation: AEE75373.1
CP002686 Genomic DNA Translation: AEE75374.1
CP002686 Genomic DNA Translation: ANM64915.1
CP002686 Genomic DNA Translation: ANM64916.1
AY034940 mRNA Translation: AAK59446.1
AY063117 mRNA Translation: AAL34291.1
AK317283 mRNA Translation: BAH19959.1
RefSeqiNP_001326916.1, NM_001338056.1
NP_001326917.1, NM_001338055.1
NP_187965.1, NM_112202.5
NP_974302.1, NM_202573.3
NP_974303.1, NM_202574.3
UniGeneiAt.8269

Genome annotation databases

EnsemblPlantsiAT3G13560.1; AT3G13560.1; AT3G13560
AT3G13560.2; AT3G13560.2; AT3G13560
AT3G13560.3; AT3G13560.3; AT3G13560
AT3G13560.4; AT3G13560.4; AT3G13560
AT3G13560.5; AT3G13560.5; AT3G13560
GeneIDi820558
GrameneiAT3G13560.1; AT3G13560.1; AT3G13560
AT3G13560.2; AT3G13560.2; AT3G13560
AT3G13560.3; AT3G13560.3; AT3G13560
AT3G13560.4; AT3G13560.4; AT3G13560
AT3G13560.5; AT3G13560.5; AT3G13560
KEGGiath:AT3G13560

Similar proteinsi

Entry informationi

Entry nameiE134_ARATH
AccessioniPrimary (citable) accession number: Q94CD8
Secondary accession number(s): B9DGU2, Q9LJD6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2003
Last sequence update: December 1, 2001
Last modified: May 23, 2018
This is version 122 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health