Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Chaperonin-like RbcX protein

Gene

At4g04330

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein binding involved in protein folding Source: TAIR

GO - Biological processi

  1. chaperone-mediated protein folding Source: TAIR
  2. response to cold Source: TAIR
  3. response to salt stress Source: TAIR
  4. response to water deprivation Source: TAIR
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Chaperonin-like RbcX proteinImported
Submitted name:
Putative uncharacterized protein At4g04330Imported
Gene namesi
Ordered Locus Names:At4g04330Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 4

Organism-specific databases

TAIRiAT4G04330.

Subcellular locationi

GO - Cellular componenti

  1. chloroplast thylakoid Source: TAIR
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ94AU9.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G04330.1-P.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GR2X-ray2.00A/B47-174[»]
ProteinModelPortaliQ94AU9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG304941.
HOGENOMiHOG000242810.
OMAiEAYMELR.

Family and domain databases

InterProiIPR003435. Chaperonin_RcbX.
[Graphical view]
PfamiPF02341. RcbX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q94AU9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MESSSSLLHH SYLSYLNPKF GKRPLVSYPL MQSSRKCKQT RICSNKMYVP
60 70 80 90 100
GFGEASPEAK AAKHLHDFFT YVAVRIVSAQ LESYNPEAYM ELREFLDTNS
110 120 130 140 150
VSDGDKFCAT LMRRSSRHMN LALRILEVRS AYCKNDFEWD NMKRLAFKNV
160 170
DDSNTRLMRE YVLETSHVET DSDK
Length:174
Mass (Da):20,199
Last modified:December 1, 2001 - v1
Checksum:iEDDB4FE3F88DCB08
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY045782 mRNA. Translation: AAK76456.1.
AY142573 mRNA. Translation: AAN13142.1.
CP002687 Genomic DNA. Translation: AEE82379.1.
RefSeqiNP_567263.1. NM_116671.2.
UniGeneiAt.34032.
At.63645.

Genome annotation databases

EnsemblPlantsiAT4G04330.1; AT4G04330.1; AT4G04330.
GeneIDi825753.
KEGGiath:AT4G04330.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY045782 mRNA. Translation: AAK76456.1.
AY142573 mRNA. Translation: AAN13142.1.
CP002687 Genomic DNA. Translation: AEE82379.1.
RefSeqiNP_567263.1. NM_116671.2.
UniGeneiAt.34032.
At.63645.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GR2X-ray2.00A/B47-174[»]
ProteinModelPortaliQ94AU9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G04330.1-P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G04330.1; AT4G04330.1; AT4G04330.
GeneIDi825753.
KEGGiath:AT4G04330.

Organism-specific databases

TAIRiAT4G04330.

Phylogenomic databases

eggNOGiNOG304941.
HOGENOMiHOG000242810.
OMAiEAYMELR.

Gene expression databases

GenevestigatoriQ94AU9.

Family and domain databases

InterProiIPR003435. Chaperonin_RcbX.
[Graphical view]
PfamiPF02341. RcbX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    EU, CSHL and WU Arabidopsis Sequencing Project
    Mayer K., Schuller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Dusterhoft A., Stiekema W., Entian K.D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Muller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portatelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.A., McCullagh B., Bilham L., Robben J., Van der Schueren J., Grymonprez B., Chuang Y.J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirske W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Kotter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., Van Montagu M., Rogers J., Cronin A., Quail M., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Blocker H., Scharfe M., Grimm M., Lohnert T.H., Dose S., de Haan M., Maarse A., Schafer M., Muller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Mundlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Montfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sehkon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffmann J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
  3. Cited for: NUCLEOTIDE SEQUENCE.
  4. TAIR10
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  5. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.
  6. "Insights into eukaryotic Rubisco assembly - crystal structures of RbcX chaperones from Arabidopsis thaliana."
    Kolesinski P., Golik P., Grudnik P., Piechota J., Markiewicz M., Tarnawski M., Dubin G., Szczepaniak A.
    Biochim. Biophys. Acta 1830:2899-2906(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 47-174.

Entry informationi

Entry nameiQ94AU9_ARATH
AccessioniPrimary (citable) accession number: Q94AU9
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: February 4, 2015
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.