Q94AU9 (Q94AU9_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chaperonin-like RbcX protein EMBL AEE82379.1

Submitted name:
Putative uncharacterized protein At4g04330 EMBL AAK76456.1

Gene names

Ordered Locus Names:	At4g04330 TAIR At4g04330
ORF Names:	AT4G04330 EMBL AEE82379.1

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL AAK76456.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	174 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 4GR2 Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	chaperone-mediated protein folding Inferred from direct assay PubMed 21922322. Source: TAIR response to cold Inferred from expression pattern PubMed 21922322. Source: TAIR response to salt stress Inferred from expression pattern PubMed 21922322. Source: TAIR response to water deprivation Inferred from expression pattern PubMed 21922322. Source: TAIR
Cellular_component	chloroplast thylakoid Inferred from direct assay PubMed 21922322. Source: TAIR
Molecular_function	protein binding involved in protein folding Inferred from direct assay PubMed 21922322. Source: TAIR
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q94AU9 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: EDDB4FE3F88DCB08	FASTA	174	20,199
	10 20 30 40 50 60 MESSSSLLHH SYLSYLNPKF GKRPLVSYPL MQSSRKCKQT RICSNKMYVP GFGEASPEAK 70 80 90 100 110 120 AAKHLHDFFT YVAVRIVSAQ LESYNPEAYM ELREFLDTNS VSDGDKFCAT LMRRSSRHMN 130 140 150 160 170 LALRILEVRS AYCKNDFEWD NMKRLAFKNV DDSNTRLMRE YVLETSHVET DSDK

References

[1]	"Arabidopsis Full Length cDNA Clones." Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T. , Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A. Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Arabidopsis Open Reading Frame (ORF) Clones." Yamada K., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hsuan V.W., Lee J.M., Quach H.L., Tang C., Toriumi M., Wallender E.K., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R. , Hayashizaki Y., Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A. Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[4]	"Insights into eukaryotic Rubisco assembly - Crystal structures of RbcX chaperones from Arabidopsis thaliana." Kolesinski P., Golik P., Grudnik P., Piechota J., Markiewicz M., Tarnawski M., Dubin G., Szczepaniak A. Biochim. Biophys. Acta 1830:2899-2906(2013) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 47-174.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AY045782 mRNA. Translation: AAK76456.1.
AY142573 mRNA. Translation: AAN13142.1.
CP002687 Genomic DNA. Translation: AEE82379.1.

IPI

IPI00532545.

RefSeq

NP_567263.1. NM_116671.2.

UniGene

At.34032.
At.63645.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4GR2	X-ray	2.00	A/B	47-174	[»]

SMR

Q94AU9. Positions 59-162.

ModBase

Search...

Protein-protein interaction databases

IntAct

Q94AU9. 2 interactions.

STRING

3702.AT4G04330.1-P.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblPlants

AT4G04330.1; AT4G04330.1; AT4G04330.

GeneID

825753.

KEGG

ath:AT4G04330.

Organism-specific databases

TAIR

At4g04330.

Phylogenomic databases

eggNOG

NOG304941.

HOGENOM

HOG000242810.

InParanoid

Q94AU9.

OMA

KMYVPGF.

ProtClustDB

CLSN2689337.

Gene expression databases

Genevestigator

Q94AU9.

Family and domain databases

InterPro

IPR003435. Chaperonin_RcbX.
[Graphical view]

Pfam

PF02341. RcbX. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q94AU9_ARATH

Accession

Primary (citable) accession number: Q94AU9

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	May 1, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)