Q94A41 (Q94A41_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-amylase-like 3 EMBL AEE34983.1

Submitted name:
At1g69830/T17F3_14 EMBL AAK91414.1

Gene names

Name:	AMY3 EMBL AEE34983.1
Ordered Locus Names:	At1g69830 TAIR At1g69830
ORF Names:	AT1G69830 EMBL AEE34983.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL AAK91414.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	887 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	starch catabolic process Traceable author statement. Source: TAIR
Cellular component	chloroplast stroma Inferred from direct assay. Source: TAIR
Molecular function	alpha-amylase activity Inferred from direct assay. Source: TAIR calcium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q94A41 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 8EA417384B1AEB69	FASTA	887	99,842
	10 20 30 40 50 60 MSTVPIESLL HHSYLRHNSK VNRGNRSFIP ISLNLRSHFT SNKLLHSIGK SVGVSSMNKS 70 80 90 100 110 120 PVAIRATSSD TAVVETAQSD DVIFKEIFPV QRIEKAEGKI YVRLKEVKEK NWELSVGCSI 130 140 150 160 170 180 PGKWILHWGV SYVGDTGSEW DQPPEDMRPP GSIAIKDYAI ETPLKKLSEG DSFFEVAINL 190 200 210 220 230 240 NLESSVAALN FVLKDEETGA WYQHKGRDFK VPLVDDVPDN GNLIGAKKGF GALGQLSNIP 250 260 270 280 290 300 LKQDKSSAET DSIEERKGLQ EFYEEMPISK RVADDNSVSV TARKCPETSK NIVSIETDLP 310 320 330 340 350 360 GDVTVHWGVC KNGTKKWEIP SEPYPEETSL FKNKALRTRL QRKDDGNGSF GLFSLDGKLE 370 380 390 400 410 420 GLCFVLKLNE NTWLNYRGED FYVPFLTSSS SPVETEAAQV SKPKRKTDKE VSASGFTKEI 430 440 450 460 470 480 ITEIRNLAID ISSHKNQKTN VKEVQENILQ EIEKLAAEAY SIFRSTTPAF SEEGVLEAEA 490 500 510 520 530 540 DKPDIKISSG TGSGFEILCQ GFNWESNKSG RWYLELQEKA DELASLGFTV LWLPPPTESV 550 560 570 580 590 600 SPEGYMPKDL YNLNSRYGTI DELKDTVKKF HKVGIKVLGD AVLNHRCAHF KNQNGVWNLF 610 620 630 640 650 660 GGRLNWDDRA VVADDPHFQG RGNKSSGDNF HAAPNIDHSQ DFVRKDIKEW LCWMMEEVGY 670 680 690 700 710 720 DGWRLDFVRG FWGGYVKDYM DASKPYFAVG EYWDSLSYTY GEMDYNQDAH RQRIVDWINA 730 740 750 760 770 780 TSGAAGAFDV TTKGILHTAL QKCEYWRLSD PKGKPPGVVG WWPSRAVTFI ENHDTGSTQG 790 800 810 820 830 840 HWRFPEGKEM QGYAYILTHP GTPAVFFDHI FSDYHSEIAA LLSLRNRQKL HCRSEVNIDK 850 860 870 880 SERDVYAAII DEKVAMKIGP GHYEPPNGSQ NWSVAVEGRD YKVWETS

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed: 11130712] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	"Arabidopsis cDNA clones." Shinn P., Chen H., Cheuk R., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J. , Lam B., Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[4]	"Arabidopsis ORF clones." Kim C.J., Chen H., Cheuk R., Shinn P., Bowser L., Carninci P., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B. , Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wallender E.K., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Davis R.W., Theologis A., Ecker J.R. Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY050398 mRNA. Translation: AAK91414.1. BT000643 mRNA. Translation: AAN18209.1. CP002684 Genomic DNA. Translation: AEE34983.1.
IPI	IPI00538901.
RefSeq	NP_564977.1. NM_105651.4.
UniGene	At.24555. At.72024.
3D structure databases
HSSP	HSSP built from PDB template 1P6W based on UniProtKB P00693.
ProteinModelPortal	Q94A41.
SMR	Q94A41. Positions 491-581.
ModBase	Search...
Protein-protein interaction databases
STRING	Q94A41.
Protein family/group databases
CAZy	CBM45. Carbohydrate-Binding Module Family 45. GH13. Glycoside Hydrolase Family 13.
Proteomic databases
PRIDE	Q94A41.
ProMEX	Q94A41.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT1G69830.1; AT1G69830.1; AT1G69830.
GeneID	843319.
GenomeReviews	Gene locus AT1G69830 in contig CT485782_GR.
KEGG	ath:AT1G69830.
NMPDR	fig|3702.1.peg.6455.
Organism-specific databases
TAIR	At1g69830.
Phylogenomic databases
eggNOG	KOG0471.
HOGENOM	HBG320462.
InParanoid	Q94A41.
OMA	FVRGFWG.
PhylomeDB	Q94A41.
ProtClustDB	PLN02784.
Gene expression databases
Genevestigator	Q94A41.
Family and domain databases
InterPro	IPR012850. A-amylase_bs_C. IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF07821. Alpha-amyl_C2. 1 hit. PF00128. Alpha-amylase. 1 hit. [Graphical view]
SMART	SM00810. Alpha-amyl_C2. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q94A41_ARATH

Accession

Primary (citable) accession number: Q94A41

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	January 25, 2012
This is version 70 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)