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Protein
Submitted name:

Pdd1p

Gene

PDD1

Organism
Tetrahymena thermophila
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Pdd1pImported
Gene namesi
Name:PDD1Imported
OrganismiTetrahymena thermophilaImported
Taxonomic identifieri5911 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi5911.EAR95962.

Structurei

3D structure databases

ProteinModelPortaliQ94996.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini49 – 11062ChromoInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IW45. Eukaryota.
ENOG4111FJ8. LUCA.

Family and domain databases

InterProiIPR000953. Chromo/shadow_dom.
IPR023780. Chromo_domain.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
[Graphical view]
PfamiPF00385. Chromo. 1 hit.
[Graphical view]
SMARTiSM00298. CHROMO. 2 hits.
[Graphical view]
SUPFAMiSSF54160. SSF54160. 2 hits.
PROSITEiPS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q94996-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFTVKSLQQF QAKKAINISI KKMSQKKSLK QKRKQDYSSD TEEEEEDQYE
60 70 80 90 100
VEKILDSRFN PKTKQKEYLV KWENWPIEDS TWEPYEHLSN VKEIVQAFEK
110 120 130 140 150
KQKANVMPQP TGPITRVNAQ KDPQKKNRLS LNSSISKSLP QEEEIQTSKE
160 170 180 190 200
DSKKQAVKKF QPASRRKSIS SQSDSDLQAE EVPQQPESKK DKNDGAFEEP
210 220 230 240 250
NNADADETEL VFEEIVDKRI LDGQTEYLIR FQNVSQPQWV DVGQLIAIKD
260 270 280 290 300
DVIAYEDKIA AQSQLNKTKN LKENAKHSSQ QQQSENNNLE TEEVEEDKDS
310 320 330 340 350
KKRSLLANSK RPTAKRSQPF NQDEEKEKSV TQPTSNLGSK GQSQQVEKEQ
360 370 380 390 400
ATNSQTQQPQ TAHRSGSRLS QIQSNANQVT QQAQQLSNTN NSSSTSLEVS
410 420 430 440 450
SKMPSQMSQK RRPIELTEIQ QGDFKTDNVD KIEIQGDFND IMTSRFEVFW
460 470 480 490
KIRQDNVTPA SQVYSASYLR RYEPQVLIDF LLQHSNQSQL RQANQQLTH
Length:499
Mass (Da):57,448
Last modified:February 1, 1997 - v1
Checksum:i888CECE705078E1F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U66363 mRNA. Translation: AAB61683.1.
U66364 Genomic DNA. Translation: AAB61684.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U66363 mRNA. Translation: AAB61683.1.
U66364 Genomic DNA. Translation: AAB61684.1.

3D structure databases

ProteinModelPortaliQ94996.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5911.EAR95962.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG410IW45. Eukaryota.
ENOG4111FJ8. LUCA.

Family and domain databases

InterProiIPR000953. Chromo/shadow_dom.
IPR023780. Chromo_domain.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
[Graphical view]
PfamiPF00385. Chromo. 1 hit.
[Graphical view]
SMARTiSM00298. CHROMO. 2 hits.
[Graphical view]
SUPFAMiSSF54160. SSF54160. 2 hits.
PROSITEiPS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Identification of a novel polypeptide involved in the formation of DNA-containing vesicles during macronuclear development in Tetrahymena."
    Madireddi M.T., Davis M.C., Allis C.D.
    Dev. Biol. 165:418-431(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CU427Imported.
  2. "Pdd1p, a novel chromodomain-containing protein, links heterochromatin assembly and DNA elimination in Tetrahymena."
    Madireddi M.T., Coyne R.S., Smothers J.F., Mickey K.M., Yao M.C., Allis C.D.
    Cell 87:75-84(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CU427Imported.

Entry informationi

Entry nameiQ94996_TETTH
AccessioniPrimary (citable) accession number: Q94996
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: May 11, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.